New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 76896 =661 (0.730)203 (0.250) 112/224 14.3 26.7% intergenic (‑145/+40) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 = 76892 525 (0.650)intergenic (‑141/+44) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 808 total aligned reads displayed.

AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019
                                                                                                                                |                                                                                                                                 
     tatatataTTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttt                                                                                                                             >  2:1708065/1‑128 (MQ=255)
       tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttt                                                                                                                           >  1:482798/1‑128 (MQ=255)
       tatatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttatt                                                                                                                           >  1:439644/1‑128 (MQ=255)
        ttatatTAGTGAAATTAATGATTTATTAAACAAATTAATAATTACAGTACAAACCAAATTACACTTTAAAATCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAA‑tttttttt                                                                                                                          <  1:1747627/127‑1 (MQ=255)
          atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttt                                                                                                                        >  1:276569/1‑128 (MQ=255)
           tatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttttttt                                                                                                                       >  1:245943/1‑128 (MQ=255)
            atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttt                                                                                                                      >  1:812455/1‑128 (MQ=255)
            atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAA‑tttttttttttt                                                                                                                      >  1:1003099/1‑128 (MQ=255)
              tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttt                                                                                                                    >  2:552152/1‑128 (MQ=255)
              tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttt                                                                                                                    >  2:164487/1‑128 (MQ=255)
              tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTAAAAGAAAAATATTACAAC‑ttattttttttttg                                                                                                                    >  1:742046/1‑127 (MQ=255)
              tAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTAAAACCCAAATTCACCTTTAAATTCAAATAACATTATATAA‑AGATATATTTTTTAAAGAAAATAATAAAAAA‑tatattttttttat                                                                                                                    >  2:1503061/1‑126 (MQ=255)
                    aattAATGATTTATAATACAAATTAATAATAAATTTAAAACCCAAATTACACTTTAAATTAAAATAAAATTATATAA‑ACATAAATTTTTTAAATAAAAATATTAAAAC‑ttttttttttttttggaact                                                                                                              <  2:456755/126‑7 (MQ=255)
                    aaatAACGATTTAAAATAAAAATTAAAAATAAAAGTACAAACCAAAATACCCATTAAATTCAAATAAAATTATATAA‑AGATAAATTTTTTAAAGAAAAATAATAAAAC‑ttttttttttttttggaact                                                                                                              <  2:697728/125‑7 (MQ=255)
                      tttatgttttataATAAAAATTTAAAATAACTGTAAAACCAAAATTACCCTTTAAATTAAAATAAAATTTTATAA‑ATTAAAATTTTTTTAATAAAAAAATTAAAAC‑TTTTTTTTTTTTTTTTGGAACt                                                                                                            <  1:1073468/119‑1 (MQ=255)
                      tttatgATTTATAATACAAATTAATAATAAATTAACAACCCAAATTAACCTTTAAATTAAAATAAAATTATAAAA‑ATATAAATTTTTTAAAGAAAAATATTAAAAC‑TTTTTTTTTTTTTTTTGGAACt                                                                                                            <  2:61172/123‑1 (MQ=255)
                       tAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGaaaaaa                                                                                                           >  2:300832/1‑125 (MQ=255)
                        aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTGTAAATTCAATTAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTATGTTTTTTTTTGGTACTAAc                                                                                                         >  1:844743/1‑128 (MQ=255)
                         aGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttttttttttggaaataaaat                                                                                                         >  2:495974/1‑117 (MQ=255)
                             tGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTGaaaataaaaaa                                                                                                     >  2:229113/1‑119 (MQ=255)
                              gTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTATTTTTTTTTTTTTTGaaaaaaaattta                                                                                                    >  1:208566/1‑118 (MQ=255)
                              gTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAACaaaaaa                                                                                                   >  1:1558558/1‑123 (MQ=255)
                              gTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAAt                                                                                                  <  2:880526/128‑1 (MQ=255)
                              gTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTCAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑‑AAATAACATATAAt                                                                                                  >  2:1176563/1‑128 (MQ=255)
                                ataataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTT‑TAACTAACATATAAtt                                                                                                 >  2:276215/1‑128 (MQ=255)
                                  aataAAAATTAATAATAAATTTTCAAACCAAAATCCCATTTAAAATCAAATAAAATTATATAA‑ATATAAATTTTTTAAATAAAAAAATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtttt                                                                                               <  2:52725/128‑1 (MQ=255)
                                  aaaaaaaaTTAATAATAAATGTACAACCCAAATTCCCCTTTAAAATCAAATAAAATTATATAA‑ATATAAATTTTTTAAATAAAAATATTAAAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTa                                                                                              <  1:1844778/123‑1 (MQ=255)
                                     aaaaaTTAATAATAACTGTAAAAACCAAATTTCACTTTAAATTCAAAAAACATTATATAA‑ATATAAATTTTTTAAATAAAAATATTTCAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCa                                                                                           <  1:402800/126‑1 (MQ=255)
                                     aaaaaTTAATAATAAATGTACAAACCAAATTCCCCTTTAAATTAAAATAAAATTATATAA‑ATATAAATTTTTTAAAGAAAAATTTTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCa                                                                                           <  1:905311/126‑1 (MQ=255)
                                     aCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTGAAAAAAAAAATAATTTTaa                                                                                             >  2:1209393/1‑127 (MQ=255)
                                      aaaaTTAATAATAACTGTACAAACCAAAATCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                         <  1:1437184/127‑1 (MQ=255)
                                        aaataataattaATTAACAAACCAAAAACCCCATTAAATTTAAATAACATTATATAA‑ATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAat                                                                                         <  1:1711896/125‑1 (MQ=255)
                                         aTTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTCACAatt                                                                                        >  1:1975041/1‑128 (MQ=255)
                                           taataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TATTTTTTTTTTTAGTAACTAAAAAATAATTTTACAAattatt                                                                                     >  1:1524780/1‑128 (MQ=255)
                                             ataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAAttatta                                                                                    >  2:1671800/1‑128 (MQ=255)
                                             ataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTATAAAGAAAAATATTACAAC‑‑TTTTTTTTTATTTAAGAAAATAACATATAAATATACAAAttatta                                                                                    >  2:791735/1‑128 (MQ=255)
                                              taataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAATAAAATATAATTTTACAAAttattata                                                                                  >  2:1310831/1‑126 (MQ=255)
                                                 taaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAATAAAATAAAATTTTCACAATAAATATaat                                                                                >  1:1348796/1‑128 (MQ=255)
                                                  aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGTAAATAAAATATAATTTAAAAAATTATTAAaat                                                                                >  2:952685/1‑128 (MQ=255)
                                                   aCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAAAAAAATTTAATTTTACAAATTAATATaattta                                                                             >  2:1859642/1‑127 (MQ=255)
                                                    cTGTTCAACCCAAATTTCCCTTTAAATTTAAATTAAATTATATAA‑ATATAAATTTTTTAAATAAAAATATTAAAA‑‑‑ATTTTTTTTTTTTTTGGTACTAACATATAATTTTACCAATTATTAGaatttca                                                                            <  1:1471592/128‑1 (MQ=255)
                                                     tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTATTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttc                                                                             >  1:1581310/1‑128 (MQ=255)
                                                     tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATaa                                                                                                   >  1:1612698/1‑104 (MQ=255)
                                                     tGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGAAAAAAAAATTTAAATTTACAAATTATTA‑aattttaat                                                                          >  1:527987/1‑128 (MQ=255)
                                                      gTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAAAAAAATATAATTTTAACAATTATTAAaatttaaaa                                                                          >  1:1873235/1‑127 (MQ=255)
                                                        aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTATGGAAAAAACAAATAATTTTACCAATTATTATaattacaatt                                                                         >  1:1370775/1‑128 (MQ=255)
                                                        aCAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGaatttaaattt                                                                        >  2:1334026/1‑128 (MQ=255)
                                                         cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTATaatttcaattt                                                                        >  2:1602688/1‑128 (MQ=255)
                                                         aaaCTCAAATTTACATTTTAATTTAAATTAAATTATATAA‑ATTTAAATTTTTTAATTAAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaatttc                                                                       <  1:37700/127‑1 (MQ=255)
                                                           acacaaattaaacTTTAAAATAAAATAAAAATAATAAA‑AGAAAAATTTTTTAAAGTAAAATATTAAAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaatttc                                                                       <  1:352379/116‑1 (MQ=255)
                                                             ccAAATTCCCCTTTAAATTCAAATAACATTATAAAA‑AGATAAAATTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTcaca                                                                    <  2:1891668/128‑1 (MQ=255)
                                                               aaagtcacattttAATTTAAATAACTATATATTA‑TTTTATATTTTTTTAATAAAAATATTAATAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                 <  2:1039738/119‑1 (MQ=255)
                                                                aaTTACCCTTTAAAATAAAATAAAATTATATAA‑ATATAAATTTTTTTAATAAAAAAATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                                 <  1:567416/128‑1 (MQ=255)
                                                                  ttacccTTTAAATACAAATAACATTATATAA‑AGATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGa                                                               <  2:436320/125‑1 (MQ=255)
                                                                    taccTTTAAATTCAAAAAACATTATATTA‑ATATTAATTTTTTAAATTAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                            <  1:1681196/126‑1 (MQ=255)
                                                                    ccccTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTACAAATTATTATAATTTCAATTTaacataagatt                                                             >  1:63870/1‑121 (MQ=255)
                                                                    acacTTTAAATTAAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAAAATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                            <  2:769710/125‑1 (MQ=255)
                                                                     cccTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCACAGAGGAATGGa                                                          >  2:1562638/1‑128 (MQ=255)
                                                                     cccTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTAC‑AC‑CTTTTTTTTTTTTTTTGGAAATAACATATATGTTAACCAATTATTAGATTTTCAAGTACACATAGGAAtt                                                            >  1:621340/1‑128 (MQ=255)
                                                                       cTTTAAAATAAAATAAAATTATAAAA‑ATATAAATTTTTTAAATTAAAATAATAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTATACCAATTATTAGAATTTCAATTTCACAGATGAATTGa                                                          <  1:494927/128‑1 (MQ=255)
                                                                         ttAAATTCAAATAACATTATATAA‑ATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                        <  2:918762/128‑1 (MQ=255)
                                                                         ttAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTGGAAAAAAAAAATAATTTTAACAATTAATAAAATTTAAATTTAAAATATTAAttta                                                          >  2:142696/1‑126 (MQ=255)
                                                                          ttaaTTAAAATAAAATTATATAA‑ATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                       <  2:1734534/126‑1 (MQ=255)
                                                                           aaaattaaattaaattATATTA‑ATAATAAATTTTTAAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                      <  2:633416/122‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAA‑AGATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                      <  2:1457102/128‑1 (MQ=255)
                                                                           aaaTTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttct                                                     >  1:1660051/1‑128 (MQ=255)
                                                                            atttCAAAAAACA‑TATATAATATATAAATTTTTATAACAAAAATTTTATAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttctt                                                    <  1:1415935/126‑1 (MQ=255)
                                                                            aaTTCAAATAAAATTATATAA‑AAATAAATTTTTTAAAGTAAAATATTACAAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                      <  2:1780011/128‑1 (MQ=255)
                                                                               taaaataaatTTATATAA‑AGATAAATTTTTTTAAGAAAAATTTTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTtcttct                                                  <  2:199899/126‑1 (MQ=255)
                                                                                ataaTAAAATTATATAA‑ATATATATTTTTTAAATAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCt‑aa                                               <  1:180829/126‑1 (MQ=255)
                                                                                   aTAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTTTAAATAAAAAAAATTTTTACAAATTATTTAATTTTCAATTAAACATATTAatttatttataataa                                                >  1:778834/1‑121 (MQ=255)
                                                                                   aTAAAAATATATAA‑ATATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCt‑aata                                             <  2:1829870/128‑1 (MQ=255)
                                                                                     aaCATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTAAAATATGAATTGATTTATTCT‑AATAAtt                                          >  2:137359/1‑128 (MQ=255)
                                                                                      aaaTTATATAT‑ATATAAATTTTTTAAATAAAAATATTACAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑aataat                                           <  2:1093153/126‑1 (MQ=255)
                                                                                       cATTATTAAA‑ATATAAAATTTTTAAATAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGt                                       <  2:833385/128‑1 (MQ=255)
                                                                                          tttataa‑atataaaTTTTTTTAATAAAAATATTTCAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCt                                     <  1:1908718/126‑1 (MQ=255)
                                                                                           atatta‑atattaATTTTTTTAATTAAAATTTTA‑AAA‑TTTTTTTTTTTTTTTTGTATCTAACATATAAATTTACCAATTATTAGAATTTAAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCt                                     <  1:93671/128‑1 (MQ=255)
                                                                                            tataA‑AGATAAATTTTTTAAAGAAAAATTTTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCtata                                  <  2:742046/128‑1 (MQ=255)
                                                                                             ataA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGTAAAAAAAATATAATTTTAACAATTATTAAAATTTAAATTTAAAATATGAATTGTTTTATTCT‑TATAttttttata                                    >  1:1310333/1‑123 (MQ=255)
                                                                                              taA‑ATATAAATTTTTTAAATAAAAATAATACAA‑‑AATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCtata                                  <  2:1530669/128‑1 (MQ=255)
                                                                                               tatatattaaTTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCtata                                  <  1:1276109/120‑1 (MQ=255)
                                                                                               aa‑aGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGTAAATAAAATATAATTTTACAAATTATTAAAATTTAAATTTAAAATATTAATTTATTTATTAA‑AAAAATTTGTCtttata                                >  2:660692/1‑128 (MQ=255)
                                                                                                atataTAAATTTTTTAAATAAAAATTTTAAAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCtatata                                <  2:405709/124‑1 (MQ=255)
                                                                                                a‑aGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATTTAATTTAACCAATTATTAAAATTAAAATTTAAAATATAAATT‑TTTTATTATAAAAAATTTGtatatata                                >  1:119843/1‑128 (MQ=255)
                                                                                                 aataTAAATTTTTTAAATAAAAATATTATAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTAACAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCtatata                                <  2:1398399/125‑1 (MQ=255)
                                                                                                   gATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTTGAATTAAAATATAATTTTAACAATTTTTAAAATTTAAATTTAAAATATGAATTCATTTATTAT‑AAAAATTTGTatatttt                                >  2:1937444/1‑125 (MQ=255)
                                                                                                    attaaTTTTTTATTTTAATATATTTAAAC‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGa                              <  1:690482/125‑1 (MQ=255)
                                                                                                    aTAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTATAATTTCAATTTCACAAATTAATTGATTTATTAT‑AAAAATTTTTCTATATAGAtt                            >  1:1116523/1‑127 (MQ=255)
                                                                                                     tAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATg                            <  2:1144855/128‑1 (MQ=255)
                                                                                                      aaaTTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTAAATTTAAAAGATTAATTTATTTATTCT‑AATAATTTGTATATATAGAtttt                          >  2:1277912/1‑128 (MQ=255)
                                                                                                         ttttttAAATAAAAATATTATAA‑‑ATTTTTTTTTTTTTTTGGAACTATCATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGtttt                        <  1:311141/128‑1 (MQ=255)
                                                                                                           ttttAAATAAAAAAATTAAAAC‑‑‑TTTTTTTTTTTTTTGGATCTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTta                     <  2:374915/128‑1 (MQ=255)
                                                                                                            tttAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTAATTAT‑AATAATTTTTATATATAAATTTTTTTtat                    >  1:1158390/1‑128 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTTatat                  <  2:1630507/128‑1 (MQ=255)
                                                                                                              tAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACAAATTATTAGAATTTCAATTTCACAGATGAATTGATTTGTTAA‑AATTATTTGTCTATATACATTTTTTTtatag                  >  2:343656/1‑127 (MQ=255)
                                                                                                                aaGAAAAATATTACAAC‑‑‑‑TTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTAAAATTTCACAGATTAATTGATTACTTCT‑AATAATTTGACTATATAGATTTTTTTTATATCTa               >  1:676623/1‑128 (MQ=255)
                                                                                                                  gAAAAATATTAAAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTTATATCTaa              <  2:1587086/128‑1 (MQ=255)
                                                                                                                   aaaaaTATTACAAC‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTAGAATTTAAATTTAAAAGATGAATTGATTTATTAT‑AATAATTTGTATATATATATTTTTTTtatttata               >  2:679523/1‑123 (MQ=255)
                                                                                                                    aaaaTATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTTATATCTaaa             <  1:984296/128‑1 (MQ=255)
                                                                                                                           tACAAC‑TTTTTTTTTTTTTTTT‑GAAATAAAATATAATTTTACCAATTATTATAATTTAAATATCACAGATAAATTGATTTATTAA‑AAAAAATTTTATATAATTATTTTTTTAATAACTaaaaaaatga      >  1:1238578/1‑121 (MQ=255)
                                                                                                                                |                                                                                                                                 
AAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAA‑AGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCT‑AATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCTT  >  CP016816/76765‑77019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.