New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 34945417 (0.520)275 (0.310)
+AAA
83/214 21.2 37.8% intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 34946 = 452 (0.500)intergenic (+50/+116) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 768 total aligned reads displayed.

TTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTT  >  CP016816/34819‑35073
                                                                                                                                          |                                                                                                                                        
tttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTTAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTAGATTTTTATATTTACTATA‑‑‑‑G‑‑‑‑a                                                                                                                                          >  2:168671/1‑128 (MQ=255)
 ttACTTCTTTATGAGTTTCAACAAAAAGAGTAATAAATGCTGAACCAAGTACAATGCTAAGTGAATATGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aa                                                                                                                                         >  2:1258815/1‑128 (MQ=255)
 ttACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGAGTTTGGATTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aa                                                                                                                                         >  2:425757/1‑128 (MQ=255)
     ttatttATTTGTTTAAACAAAAAGATTAATAAATGCTGAACCAAGTACAATGGTTAGTGACGTTGTTTAATAATAAAATTTTAAACAAAATACTTTGGGTTTGGTTTTTTTATTTACTTTT‑‑‑‑T‑‑‑‑aaaaaa                                                                                                                                   <  1:1667260/125‑1 (MQ=255)
        tttATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAGGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATATACTATT‑‑‑‑G‑‑‑‑aaaaaaaaa                                                                                                                                >  1:1851016/1‑128 (MQ=255)
        tttATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaa                                                                                                                                >  1:378337/1‑128 (MQ=255)
          tATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑T‑‑‑‑aaaaaaaaaaa                                                                                                                              >  1:533074/1‑128 (MQ=255)
          tATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaaaa                                                                                                                              >  1:1605130/1‑128 (MQ=255)
           aTGATTTTAAAAAAAAATATTAATAAATTCTCAACAAATTAAAATGTTAATTTAATTTTATTAATAAAAAAAAAAAAAACAAAAAACATTGTGTTTGGTTTTTTTATTTAATATT‑‑‑‑T‑‑‑‑aaaaaaaaaaaa                                                                                                                             <  2:762895/128‑1 (MQ=255)
              aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGTTTTTTTTATTTACTATT‑‑‑‑T‑‑‑‑aaaaaaaaaaaaaaa                                                                                                                          >  2:808256/1‑128 (MQ=255)
                tttCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaaaaaaaaaa                                                                                                                        >  1:113731/1‑126 (MQ=255)
                  taaaaaaaaaTATTAATAAATCCTGAACAAATTAAAATTCTAATTTATTTTGATTAATAAAAAAATATAAAACCAAAAAAATTTTGTTTGGTTTTTTTATTTAATATT‑‑‑‑T‑‑‑‑aaaaaaaaaaaaaaaaata                                                                                                                      <  2:366029/123‑5 (MQ=255)
                  tCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTATGTTTGTTTTTTTTATTTACTATT‑‑‑‑T‑‑‑‑aaaaaaaaaaaaaaaaaaa                                                                                                                      >  1:355239/1‑127 (MQ=255)
                   caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAATTGAAGTTTATTAATAATAAAAGATTAAACCAAATACATATAATAAAGATATTTTATTTACTATT‑‑‑‑A‑‑‑‑aaaaaaaaaaaaaaaaaaaa                                                                                                                     >  2:1426829/1‑126 (MQ=255)
                   caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaaaaaaaaaaaat                                                                                                                     >  2:1585676/1‑126 (MQ=255)
                   caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaaaaaaaaaaaaa                                                                                                                     >  1:1813423/1‑126 (MQ=255)
                   caacaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑aaaaaaaaaaaaaaaataaa                                                                                                                     >  1:1237586/1‑123 (MQ=255)
                     acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAaaaa‑‑aa‑‑‑ta                                                                                                              >  2:571176/1‑128 (MQ=255)
                          aaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAAtt                                                                                                           >  2:178772/1‑128 (MQ=255)
                           agagTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAaaaa‑‑aa‑‑‑taaaaatt                                                                                                        >  1:1548190/1‑123 (MQ=255)
                                 aaaaaTGATGAACAAAGTACAATGCTAAGTGAAGTTGTTTAATAATAAAATTTTAAACCAAATACATTGTGTTTGGTTTTTTTTTTTAATATT‑‑‑‑‑‑‑‑TAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACtat                                                                                                 <  1:1006183/126‑1 (MQ=255)
                                  taaaTGGTGAACCAATTACAATTCTAATTTAAGTTTATTAATAATAAAATATTAAACCAAATACATTTTTTTTGGTTTTTTTTTTTAATATTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACta                                                                                                  <  1:685607/127‑1 (MQ=255)
                                  gAAATGCTGAACCAAGTACAATCCAAAGTCAAGTTGATGAATAATAAAACATTAAACCAAATACATAGTGATAGCTTTTTATATTTAATATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAaaaa‑‑aa‑‑‑aaataaattcaaaac                                                                                                 >  1:570601/1‑117 (MQ=255)
                                   aaaTTCTTAACAAAGTACATTGGTAAGTGTTTTTTTTTAATAATAAAATTTTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAATTTTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACtat                                                                                                 <  1:142449/128‑1 (MQ=255)
                                   aaaTGCTTAACCAATTTAAATTCTATGTGAAGTTGTTGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAATTTT‑‑‑‑T‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACtata                                                                                                <  1:177364/128‑1 (MQ=255)
                                   aaaTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑AAAttttaaaaataa                                                                                                 >  2:720848/1‑119 (MQ=255)
                                          gAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑AA‑‑‑TAATTTAAATAATaaaaaaaa                                                                                           >  2:861172/1‑128 (MQ=255)
                                                aGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTTAATAATATAAAAAATtttttt                                                                                    >  1:168353/1‑128 (MQ=255)
                                                       tGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑AAATTTGAATAATATAAAAAATTTTATATAAAATaa                                                                           >  2:611886/1‑128 (MQ=255)
                                                        gCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTTAATAATATAAAAAATTTTTTTTCAAATa                                                                            >  2:100524/1‑128 (MQ=255)
                                                        gCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑AA‑‑‑AAATTTTAAAAAAATAAAAAATTTTTTTTAaaaaaa                                                                           >  2:1869139/1‑128 (MQ=255)
                                                        gCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGAGTTTGGTTTTTTTATTTACTATA‑‑‑‑GAA‑‑AAAAAAAAAAAAAAAAAA‑‑AA‑‑‑AAATTTAAAAAATAAAAAAAATTTTTTTTaaaaaa                                                                             >  1:435356/1‑126 (MQ=255)
                                                         cTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑AA‑‑‑TAATTTTAATAAAATAAAAAAATTTTTTTAaaaaaaa                                                                          >  2:1120919/1‑127 (MQ=255)
                                                              tGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATAATATAAAAAATTATTTTAAAAATaataaata                                                                     >  2:838545/1‑122 (MQ=255)
                                                                  gTTTATTAATAATAAAAGATTAAACCAAATAAATTTTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGa                                                                 <  2:1817253/128‑1 (MQ=255)
                                                                   ttGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑TA‑‑‑AAAATTAAATAATAAAAAAAATTTTTTTTAaaaaaataataaataat                                                                >  2:1345036/1‑117 (MQ=255)
                                                                   ttGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATA‑‑‑‑GAA‑‑AAAAAAAAAAAAAAAAAA‑‑AA‑‑‑TAATATAAATAATAAAAAAAAATATTTTTAAAAAAATAATTCaaaa                                                                 >  1:639494/1‑125 (MQ=255)
                                                                       ttaataatAAAATTTTAAACCAAATAAATTGTTTTTGGTTTTTTTATTTAATATTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTaaa                                                            <  1:1494919/126‑1 (MQ=255)
                                                                       tgaATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATAATATAAAAAATTGTTTTTCAAATAAGTATTAATGATTaaa                                                            >  2:1841830/1‑128 (MQ=255)
                                                                          ataataAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTTAAAA‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTAAAAAATAAAAAAAATTTTTTTTAAAATAAATAttaaaaaataat                                                            >  1:1958125/1‑118 (MQ=255)
                                                                             ataaAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAAAAA‑‑TA‑‑‑TAATTTGAAAAAATAAAAAAATTTTTTTTCAAATAAGTATACAGGAGTaaaataaa                                                       >  1:1580485/1‑123 (MQ=255)
                                                                              taaAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCATTATTAAATTTaaaaa                                                    >  2:1213560/1‑128 (MQ=255)
                                                                               aaaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATTTAAA‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑AAATTTGAATAATATAAAAAATTTTTTTTAAAAAAATTATAAAATAATAAATTTaaa                                                      >  2:695515/1‑128 (MQ=255)
                                                                                aaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAAAAAAAAAAAAAAAAAATAA‑‑TT‑‑‑TAATTTTAATAATATAAAAAATTTTTTTTAAAATAATTTTTAATGTTTAAATTTaaaa                                                     >  1:1257182/1‑128 (MQ=255)
                                                                                 aaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATAATATAAAAATATTTATTTAAAAAAATTATTAAGTAGTAAATTTaaaaaaa                                                  >  2:164842/1‑127 (MQ=255)
                                                                                  ataTTAAACAAATAAAATTGTGTTTGTTTTTTTTATTTACTATTTA‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAAc                                                  <  1:1624059/126‑1 (MQ=255)
                                                                                   gATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAAAAAAAAAAAAAAAAAAATAT‑‑TA‑‑‑TAATTTTAATAATAAAAAAAATTATTTTAAAAATAATTATAAATTATTAAATTTaaaaaa                                                   >  2:202879/1‑128 (MQ=255)
                                                                                   gATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGTAGTAAATTTAAAAAAcaa                                                >  1:204744/1‑126 (MQ=255)
                                                                                    ataaaaaCAAATACATTTTGTTTGGTTTTTTTATTTAAAATT‑‑‑‑T‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                              <  1:1372947/125‑1 (MQ=255)
                                                                                    ataaaaCAAAAAACATTGTTTTTGGTTTTTTTATTAATTATTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                               <  2:1046600/125‑1 (MQ=255)
                                                                                     ttAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTTAATAATATAAAAAATTTTTTTTAAAATAATTATTAATTATTAAATTTAAAAAACaaa                                               >  2:290900/1‑128 (MQ=255)
                                                                                      tAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAAAAA‑‑AAAATTATTTTGAATAATTAAAAATTTTTTTTTTAAATAAATTATTATGTATTAAATTAAAAAAACaaa                                               >  2:171310/1‑128 (MQ=255)
                                                                                       aaaCCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAAAAAAAAAAAAAAAAAAAAA‑‑TA‑‑‑TAATTTTAATAATATAAAAAATTTTTTTAAAAATAATTATAAAATAGAAATATAAAAAAACaaat                                             >  2:1103056/1‑126 (MQ=255)
                                                                                       aaaCCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑TA‑‑‑AAATTTGCATAAAATAAAAAATTTTTTTTCAAATAATAATAAAGTATTAAATTTAAAAAACCaaaat                                            >  1:975773/1‑125 (MQ=255)
                                                                                       aaaCCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAAAAAATTA‑‑‑AAAATAAAATAATAAAAAAAATTGTTTTACAAATAATAATTCAGTATAAAATTTAAAAAACaaaaa                                             >  1:1930886/1‑126 (MQ=255)
                                                                                          aaaaataaatTTTTTTTGGTTTTTTTTTTTTATATTTAAA‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGt                                           <  2:1450626/126‑1 (MQ=255)
                                                                                            aaattaatttttttttGTTTTTTTTTTTAATATTTA‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtat                                        <  1:328503/116‑1 (MQ=255)
                                                                                            aaaacatttggttttGTTTTTTTTATTAAATTTTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                      <  2:668209/116‑1 (MQ=255)
                                                                                            aaaaACATTGTGTGTGTTTTTTTTTTTTAATATTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                      <  1:1289838/128‑1 (MQ=255)
                                                                                            aaaTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAAAAAAAAAAAAAAAAAAAAA‑‑AA‑‑‑TAATTTTCATAATAAAAAAAAATTTTTTTAAAAAAATTATTAAGTATTAAATTTaaaaaaaaaaaaataa                                         >  2:269386/1‑118 (MQ=255)
                                                                                            aaaTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTTTTTTACAAATAAGTATAAATGATTAAATTTAAAAAACaaaaattaat                                        >  2:773561/1‑121 (MQ=255)
                                                                                            aaaTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCTTACTATAAAAAATTGTTTTTAAAATAAGTATTAAGGATTAAATTTAAAAAAACAAGAGATATaa                                     >  2:386778/1‑128 (MQ=255)
                                                                                            aaaTACATTGTGGTTGGGTTTTTTATTTACTAAT‑‑‑‑G‑‑‑‑AAAAATAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                      <  2:636274/128‑1 (MQ=255)
                                                                                             aaTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATAATATAAAAAATTTTTTTTCAAATAATTATTAAGGAGTAAATTTAAAAAACAAAGAGTTATaaa                                    >  2:162389/1‑128 (MQ=255)
                                                                                              aaaCATTTTGTTTGGTTTTTTTTATAACTATTTAAA‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                      <  2:1562732/126‑1 (MQ=255)
                                                                                              aTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GAA‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATAATATAAAAAATTGTTTTTCAAATAATTATTCATTATTAAATTTAAAAAACCAAAAGTTaaaa                                     >  2:152926/1‑128 (MQ=255)
                                                                                              aTACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTACAAATAATTATAAATTAGTAAATTTAAAAAACCAATAATTAaaaa                                    >  1:1906300/1‑128 (MQ=255)
                                                                                              aTAAATAGTTTTTGGTTTTTTTATTTAATATTT‑‑‑‑A‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATaac                                    <  2:1404660/128‑2 (MQ=255)
                                                                                               tACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATAATATAAAAAATTTTTTTAAAAAAAATTATTAAGTAGTAAATTTAAAAAACCATAATTTATaaaa                                   >  1:230512/1‑127 (MQ=255)
                                                                                               caCAATGTATTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑TA‑‑‑TAATTTGCATACAATAAAAAATTGTTTTTCAAATAAGTATTAAGGAGTAAATTTAAAAAAACAATATTTATAAAt                                   >  1:1737640/2‑128 (MQ=255)
                                                                                                 cATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑AAATTTGAATAAAATAAAAAATTTTTTTTAAAATAATAATTAATTAGTAAATTTAAAAAACCAATATTTAAAAATCt                                 >  1:792603/1‑128 (MQ=255)
                                                                                                      tgtTTGTATTTTATATATACAATT‑‑‑‑C‑‑‑‑AAATAATAAAAAAAAATAA‑‑TA‑‑‑TAATTTCCATACTATAAAAAATTTTTATACAAATAATAATTCAGGAGTAAATTTAAAAAACCAAGAATTATAACTCTTGGtt                            <  2:453032/128‑1 (MQ=255)
                                                                                                      tgtTTGGTTTTTTTATTTACTATT‑‑‑‑GAAAAAAAAAAAAAAAAAAAAA‑‑TA‑‑‑TAATTTGAATAATAAAAAAAATTTTTTTTAAAAAAATTATAAATAATTAAATTAAAAAAAAAAAAATTTATAAAtaatgt                              >  2:899747/1‑123 (MQ=255)
                                                                                                      tgtTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTTTTTTTAAAATAATTATAAATGAGTAAATTTAAAAAACAAAGAGTTATAAATATTTGtt                            >  2:1754057/1‑128 (MQ=255)
                                                                                                       gtTTGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATACTATAAAAAATTTTTTTTCAAATAAGTATTAAGGATTAAATTTAAAAAACCAAGAGTTATAAATATTGtttt                           >  2:1911615/1‑128 (MQ=255)
                                                                                                        tttGGTTTTTTTATTTAATATT‑‑‑‑T‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttttt                         <  1:86617/128‑1 (MQ=255)
                                                                                                         ttGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATACTATAAAAAATTGTTTTTAAAAAAAATATTAATAATTAAATTAAAAAAACAAAGATATATAAATCTTGGttttt                         >  2:1324412/1‑128 (MQ=255)
                                                                                                         ttGGTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAAAAA‑‑AA‑‑‑TAATTTTAAAAAAATAAAAAATTTTTTTTAAAAAAATTAATAATTATTAAATTTAAAAAAACAAAATTTATAAAtaatttttttt                         >  1:599720/1‑118 (MQ=255)
                                                                                                          tGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑AAAATTTCATACTATAAAAAATTTTTTTTAAAATAATTATTAAAGAATAAAATTAAAAAAAAAAAAATTATAAAAAATGGttttttt                       >  1:146709/1‑127 (MQ=255)
                                                                                                           tttttttttATTTAATATT‑‑‑‑T‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGt                      <  1:407703/126‑1 (MQ=255)
                                                                                                           ggTTTTTTTTTTTAATTTT‑‑‑‑T‑‑‑‑TAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGt                      <  1:1053999/128‑1 (MQ=255)
                                                                                                           ggTTTTTTTATTTACTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATAATATAAAAATTTTTTTTACAAATAAGAATTCAGTAGAAAATTTAAAAAACAAATAGTTATAAATCTTGGTTTTTTg                       >  2:1963521/1‑128 (MQ=255)
                                                                                                           ggTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGAATACTATAAAAAATTTTTTTTCAAATAATTATTCAGTATTAAATTTAAAAAACCAATATTTATAAATATTGTtttttttt                      >  1:73823/1‑126 (MQ=255)
                                                                                                                ttttATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAT‑‑TT‑‑‑AAAATTTCATTATAAAAAAAATTTTTTTTAAAAAAATAAATAATCATTAATTTTAAAAAAAAAAAAATATTAAAAATTTGTTTTTTTTtataa                >  2:1171894/1‑127 (MQ=255)
                                                                                                                ttttATTTACAATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTtat                  <  2:937716/128‑1 (MQ=255)
                                                                                                                 tttattttatATT‑‑‑‑T‑‑‑‑AAAAAAAAAAAAAATTA‑‑TA‑‑‑TAATTTTCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtatt               <  2:520769/128‑1 (MQ=255)
                                                                                                                 tttatttaCTATT‑‑‑‑GA‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATAATATAAAAAATTTTTTTTCAAATAAGTATTAAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTTTTtata                 >  2:1484038/1‑128 (MQ=255)
                                                                                                                              ttattatttaaaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtatta              <  1:1340282/116‑1 (MQ=255)
                                                                                                                                taatatttaaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattatt            <  2:108078/118‑1 (MQ=255)
                                                                                                                                 tattattttaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattatta           <  1:1183909/119‑1 (MQ=255)
                                                                                                                                  tattgaaaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGAATACTATAAAAAATTTTTTTAAAAATAAGTATTCAGGATTAAATTTAAAAACCCAAAATTATAAAATGTTGGTTTTTTTTTTTtattttttt          >  1:1715687/9‑126 (MQ=255)
                                                                                                                                  ctattgaaaaaaaaaaaaaaaaaaaa‑‑TA‑‑‑TAATTTGAATAATATAAAAAATTTTTTTTAAAATAATTATTCAGGATTAAATTTAAAAAACAAATATTTATAAATATTGGTTTTTTTTTTAtattattat          >  1:492540/9‑128 (MQ=255)
                                                                                                                                  ctattgaaaaaaaaaaaaaaaaaTAA‑‑TT‑‑‑TAATTTGCATAATTAAAAAAATTGTTTTTAAAATAATTATTAAGGATTAAATTAAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattattat          >  2:1269262/9‑128 (MQ=255)
                                                                                                                                  aatatttaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattattat          <  2:1950969/120‑1 (MQ=255)
                                                                                                                                    atttaaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAttt        <  1:290900/122‑1 (MQ=255)
                                                                                                                                    attgaaaaaaaaaaaaaaaaaTAA‑‑AA‑‑‑TAATTTGCATACAAAAAAAAATTTTTTTTCAAATAATTATTCAGGATAAAATTTAAAAAACCAATAGTTATAAATCTTGGTTTTTTTTTTATATTAtttttt        >  1:1118171/7‑128 (MQ=255)
                                                                                                                                     tttaaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTg       <  1:1086605/123‑1 (MQ=255)
                                                                                                                                     attgaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATACTTTAAAAAATTGTTTTTAAAAAAAGTATTAAGTATTAAATTTAAAAAACAAAAATTTATAAAAATTGTTTTTTTTTTTTTTTTATTAtttt       >  2:338984/6‑127 (MQ=255)
                                                                                                                                      ttgaaaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATAATATAAAAAATTTTTTTTCAAATAATTATTCAGGATTAAATTTAAAAAACAAAGATTTTTAAATCTTGGTTTTTTGTTTATATTATTAttttt      >  1:916414/5‑126 (MQ=255)
                                                                                                                                          aaaaaaaaaaaaaaaTAA‑‑TA‑‑‑TAATTTGCATAATATAAAAAATTTTTTTTAAAATAATTATTAATGAGTAAATTTAAAAAACAAATATTTATAAATATTGTTTTTTTTTTTTTATTATTATTTGTAttt  >  2:484413/1‑128 (MQ=255)
                                                                                                                                          |                                                                                                                                        
TTTACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTACTATT‑‑‑‑G‑‑‑‑AAAAAAAAAAAAAAATAA‑‑TA‑‑‑TAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTT  >  CP016816/34819‑35073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.