New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP016816 | 437881 = | 279 (0.310) | 134 (0.180) | 38/210 | 39.0 | 37.6% | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
? | CP016816 | = 437888 | 210 (0.280) | intergenic (‑192/+230) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
Rejected: Coverage evenness skew score above cutoff. |
Only 100 of 375 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT > CP016816/437754‑438008 | gAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAACCCTCAATATTACCTATAGAGTTATT‑‑G‑‑‑‑‑‑‑‑a > 1:390010/1‑128 (MQ=255) gAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑a > 2:937786/1‑128 (MQ=255) gAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑a > 1:1589567/1‑128 (MQ=255) gAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑a > 2:1607862/1‑128 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑at > 1:1419882/1‑128 (MQ=255) aCTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atat > 2:209469/1‑128 (MQ=255) cTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atata < 2:1217192/128‑1 (MQ=255) tATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑t‑‑‑‑‑‑‑‑atatat‑‑a > 2:706666/1‑128 (MQ=255) aTTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAATTATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑T‑‑‑‑‑‑‑‑atatat‑‑at > 1:720581/1‑128 (MQ=255) aTTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑at > 1:837123/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑ata > 2:1523156/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑ata > 1:1331809/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑ata > 2:87776/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATAATACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑ata > 1:1229033/1‑128 (MQ=255) ttgtatttgtatGTTTCA‑TTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑t < 1:622208/128‑1 (MQ=255) ttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑t > 2:1686888/1‑128 (MQ=255) tacaaaaatAAGTTTCATTTTTTATTAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGCAAATGAAGCAAATCAAAAACCTCCAAATTACATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑t > 1:100244/9‑128 (MQ=255) acaaaaatAAGTTTCATTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑ta > 1:1976680/8‑128 (MQ=255) tAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tata > 1:419856/1‑128 (MQ=255) aGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatat > 2:629131/1‑128 (MQ=255) aGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatat > 1:363751/1‑128 (MQ=255) gTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatata > 2:1052955/1‑128 (MQ=255) ttttaatattCA‑TTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATAACCTATAGAGATAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatat < 2:778203/120‑1 (MQ=255) ttGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatat > 2:284766/1‑128 (MQ=255) tGTTAGTTTCA‑TTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatata < 1:1779593/128‑1 (MQ=255) tGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatata > 1:1207549/1‑128 (MQ=255) gTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatat > 2:731374/1‑128 (MQ=255) aaGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatat > 2:1368390/1‑128 (MQ=255) ttttAATATATATTATAAATTTAAATTGTATTTTTAAAATAAATATTTTTGGAAATGAAGCAAAGAAAAAACCTCAATATTAAATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatatatatcatta < 1:216244/128‑6 (MQ=37) ttttAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAACATCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatatatatatata < 2:1639315/128‑4 (MQ=255) ttttatatatattttatatataTATTTTATTTTTAAAATAAATATTTTATTTAAACAATAAAACAAAAAAAATATATATAAAATATATATATTAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatatatatatatat < 1:243082/128‑5 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatatatatatatat > 2:1769153/1‑124 (MQ=255) taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGa > 2:1739140/1‑128 (MQ=255) aataaataTTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATTATATGAAGCAAATCAAAAAAATCCATATTAACTATATAGATAAT‑‑T‑‑‑‑‑‑‑‑atatat‑‑atata‑‑tatatatatatatatatatatatg < 1:928584/128‑8 (MQ=255) ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATc < 2:664117/128‑1 (MQ=255) tatatTAGATATATTAATTTTATTTTTATAAAAAATATTTTATTATATTAATAAAAAAAAAAAAATCAATATATTATATAGAGTTAAT‑‑T‑‑‑‑‑‑‑‑ttatat‑‑atata‑‑tatatatatatatatatatatatgcaag < 2:1207549/127‑12 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCATAGAAAAAACCTCTATATTACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGAt < 1:895524/128‑1 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCa > 1:1794365/1‑128 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGAAAGAGATCa > 2:440625/1‑128 (MQ=255) aaataataaaTAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGACGCACATCAAAAAACACTATATAACCTATAGAGATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑T‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATaaa < 1:1284009/121‑1 (MQ=255) tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAACTCTATATTACCTATAGAGTTAAT‑‑T‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGc < 2:456820/128‑1 (MQ=255) atTAGAAAAAAAAATTGTATTTTTAAAATAAATATTATAGGAAATCAAGCATAGCAAAAACCTCAATATTACCTATAGAGATAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATa < 2:881761/128‑1 (MQ=255) tatataTAAATATTGTATTTTTAATATATATATTTTTGTTAATTACTCAAAGCAAAAACATCAATATTAACTATAGAGATATT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCa < 2:1460119/123‑1 (MQ=255) tataaaTAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATa < 1:1697318/125‑1 (MQ=255) tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑T‑T‑TATATATATATATGCAAGAGAGCAGCATata > 1:1953628/1‑126 (MQ=255) aGAAATAAAAATAGTATTTTTATAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACATCCATATTAAATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATaa < 2:109033/128‑1 (MQ=255) aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATaaaa < 2:1794365/128‑1 (MQ=255) aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGAATaaaa > 2:844143/1‑128 (MQ=255) aTAAAAATTTTATTTTTAAAATATATATTTTATTAAATTAATAAAATAAAAAAACTCTATATAAAATATAGAGTTAATTAT‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATaaaa < 2:599796/128‑1 (MQ=255) aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATAtgtg > 2:82796/1‑106 (MQ=255) tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATTTGCACGAGATCAGCATAAAATGGTGAAATTTa > 1:744769/1‑128 (MQ=255) ttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGCTGAGCATAAAATGGTGAAtttt > 2:1327749/1‑128 (MQ=255) tttAAAATAAATATTTTATGAAAATAATCAAACCAAAAACCTCAATATTAACTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATc < 1:513585/128‑1 (MQ=255) tttAAAATAAATATATTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg < 1:335497/128‑1 (MQ=255) ttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATAAAAGCTATCATCATAAAATGGTGATATTTAg > 2:1435218/1‑128 (MQ=255) ttAAAATAAATATATTTGGAAATTAACCAAAGCAAAAACCTCCATATAAACTATAGAGTTAAT‑‑GATATATATATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt < 1:472257/128‑1 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCACAGCAAAAAACTCCATATTAGCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 2:1390874/128‑1 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATTT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATACAATGGTGAATTTTAGATCTg > 2:382636/1‑128 (MQ=255) aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGAGATAAGAATAAAATTTTGAAATTTATATCTGAGt > 1:639780/1‑128 (MQ=255) aaataaatATTTTATGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:1645426/128‑1 (MQ=255) aataTTTTACTAAATGAACCATATCAAAAACCTCAATATTATCTATATAGTTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa < 2:358564/128‑1 (MQ=255) atatTTTAGGAAATGAAGCAAAGCAAAAACATCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑AT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa < 2:1506450/128‑1 (MQ=255) atatTTTAGCAAATCAACCAAACAAAAAACCTCCATATTATCTCTAGAGTTATT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 2:556253/128‑1 (MQ=255) atTTTATTAAATGAAGCAAATCAAAAACATCAATATTATCTATAGAGTTAAT‑‑GATATAT‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 1:686172/128‑1 (MQ=255) ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATATTTATATATATATATATATACAAGCGATCATCATAAAATTGAGATATTTAGATCTGATTTAGTca > 2:1259479/1‑127 (MQ=255) tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑A‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt < 1:1717543/128‑1 (MQ=255) tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑AT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAAtagat > 2:15497/1‑124 (MQ=255) attataTGAATCAAAGAAAAAACCTCGATATTACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCATGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa < 2:1130161/123‑1 (MQ=255) ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGAAAGCGATCAGCATAAATTGTTGATATTTAGATATGAGTAGGTATTAAAttt > 2:1750947/1‑128 (MQ=255) aaaTGAAGCTAATAAAAAAACTCTATATTAACTATATAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt < 1:1441802/128‑1 (MQ=255) tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGAGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAAtttc > 2:1828507/1‑127 (MQ=255) caagaacataaaaaaCCTCAAAATTAAATATAGAGTTATT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt < 1:1909537/118‑1 (MQ=255) agcaaagcaaAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCACGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTGTTAAATTTGttg > 1:141375/1‑126 (MQ=255) gcaatccaaaAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑AT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGGCTTAAATTTGTAGTTtttattt < 2:1191113/122‑1 (MQ=255) aacaaaaaaCATCAATATTAACTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtttt < 2:238520/124‑1 (MQ=255) caaaAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat > 2:1898917/1‑128 (MQ=255) aaaaaaCCTCTATATTACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt < 1:1171085/127‑1 (MQ=255) aaaaCCTCCATATTACCTATAGAGTTAAT‑‑GATATAT‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTTATATATATATCTGATTTGGTCTTAAATTTTTAGTTtttat > 2:1949086/1‑128 (MQ=255) aaaaCCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCATCATAAAATTGTGAAATTTAGATCTGTGTTGGTCTTATATTTTTAGTTTttatttat > 1:807541/1‑128 (MQ=255) aaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGttt > 2:260582/1‑128 (MQ=255) aCCTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 1:350803/128‑1 (MQ=255) ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta < 1:1833539/128‑1 (MQ=255) cTCAATATTACCTATATAGTTAAT‑‑T‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:49046/128‑1 (MQ=255) tCCATATTACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTATATTTGTAGTTTTTATATATAGTTta > 1:1541859/1‑128 (MQ=255) ccATATTACCTATAGAGTTAAT‑‑GATATAT‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGAGAGCGATCATCATAAAATGGTGATATTTATATCTGTGTTTGTATTAAATTTTTATTTTTTTTTtatatt > 1:972765/1‑126 (MQ=255) ccATATTACATATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATACATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:321177/128‑1 (MQ=255) ttACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATTCAAGCGATCATAATAATATTGATAAATATATATGTGATTTGATCATAAATTTTTATTTTTTATTTATATTATATaattt > 2:1417625/1‑125 (MQ=255) ttACCTATAGAGTTAAT‑‑GAT‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGt > 1:1892597/1‑128 (MQ=255) tACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGAGATCAGAATAAAATTGTTATATTTATATCTGATTTTTTCTTAAATTTGTAGTTTATATTTATAGTTTATAAAGTtaa > 2:1972794/1‑128 (MQ=255) ttAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATTCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTGTATTTTTTATATATATTTTATAAATTTAATAATTTATAtt > 1:1389858/1‑128 (MQ=255) aT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttttt < 2:1873220/128‑1 (MQ=255) aatgatatatatatat‑‑atata‑‑tatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 1:1517709/118‑1 (MQ=255) tgatatatatatat‑‑atata‑‑tatatatatatatatatGCAAGCGATCAGCATAAAATTGAGATATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATATTTTATATATATAATAATTTata > 1:1565354/9‑126 (MQ=255) tatatatatatat‑‑atata‑‑tatatatatatatatatTCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTATTATATTTTTAGTTTTTATTTATAGTTTATCTATTAAAAAATTTatat > 1:1061808/8‑128 (MQ=255) tgatatatatat‑‑atata‑‑tatatatatatatatatGAAAGCTAAAAGCATAAAATAGTGAAATTTAGATATGAGTTTGTATTAAATTTTTATTTTTTATTTATATTTTATAAATTAAATAATTTATAtt > 1:259119/7‑128 (MQ=255) atatatatatat‑‑atata‑‑tatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAATTTAATTATTTATAtt > 1:879671/7‑128 (MQ=255) tatatatatat‑‑atata‑‑tatatatatatatatatGCTAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt < 2:427951/123‑1 (MQ=255) tatatatatat‑‑atata‑‑tatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt < 2:242358/123‑1 (MQ=255) tatatatatat‑‑atata‑‑tatatatatatatataaACAAGCTCACAACAAAATATGGATATATATATATCAGATTTTATATAAAATTTGTATTTTTTATATAGTTTATATAAATTAAATATTTTattttt > 1:7645/6‑123 (MQ=255) atatatat‑‑atata‑‑tatatatatatatatatGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATATAGATTTTTa > 1:1101765/3‑128 (MQ=255) | GAAACTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATAT‑‑ATATA‑‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT > CP016816/437754‑438008 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |