BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	437887 =	1171 (0.560)	234 (0.130)	56/208	38.3	20.4%	intergenic (‑191/+231)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	= 437880	854 (0.490)	234 (0.130)	56/208	38.3	20.4%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1401 total aligned reads displayed.

TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTA  >  CP016816/437760‑438014

tATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatata                                                                                                                                 >  1:3759757/1‑128 (MQ=255)

   ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatat                                                                                                                              <  2:3115533/128‑1 (MQ=255)

    tttGTAGTTGTAAGTTTCATTTTTAATAAATAATAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatata                                                                                                                             >  1:1246895/1‑128 (MQ=255)

       ttAGATGTTAGTTTGATTTTTAATATATTTAAGAAATAAATATTGTATTTTTAAAATAAATATTTTAGTAATTGAAGATAAGCAAAAACCTCTATATTAACTATAGAGTTAATG‑‑atatatatatatat                                                                                                                          <  1:2771305/127‑1 (MQ=255)

       gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatat                                                                                                                          <  2:278272/128‑1 (MQ=255)

       gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTATTAAAATATATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatat                                                                                                                          <  2:1968034/128‑1 (MQ=255)

         aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatat                                                                                                                        >  2:2127914/1‑128 (MQ=255)

          gTTGTAATTTTAATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatata                                                                                                                       <  2:2991603/128‑1 (MQ=255)

              ttaGTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATCAATAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatata                                                                                                                   <  1:800161/126‑1 (MQ=255)

               aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatat                                                                                                                  >  2:136120/1‑128 (MQ=255)

               aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatat                                                                                                                  >  2:3492653/1‑128 (MQ=255)

                attttCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                 <  1:877618/126‑1 (MQ=255)

                aGTTTCTTTTTTAATAAATATTATAAATAAAAATTGTATTTTTTAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATt‑‑atatatatatatatatatatata                                                                                                                 <  1:2116030/128‑1 (MQ=255)

                aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                 <  2:1072558/128‑1 (MQ=255)

                aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                 >  2:162248/1‑128 (MQ=255)

                aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatata                                                                                                                 >  1:1585654/1‑128 (MQ=255)

                 ttttatattttAATAAATAATATAAATAAAAATTTTATTTTTATAATAAATATTTTAGTATATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatat                                                                                                                <  2:2907077/121‑1 (MQ=255)

                 ttttAATTTTTAATATATATTATATATAAAAATTTTATTTTTAAAATATATATTTTATGAAATGTATAAAAGATAAAACATCCATATTTACTATAGAGTTAATG‑‑atatatatatatatatatatatat                                                                                                                <  1:3917672/127‑1 (MQ=255)

                 gtttattttttAATAAATTTTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGACGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatat                                                                                                                <  1:2896766/122‑1 (MQ=255)

                 gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatat                                                                                                                >  2:1747174/1‑128 (MQ=255)

                  tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatata                                                                                                               >  2:3888024/1‑128 (MQ=255)

                   ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatgtatatatatatatat                                                                                                              <  1:1436011/128‑1 (MQ=255)

                   ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatat                                                                                                              <  2:916971/128‑1 (MQ=255)

                    taaTTTTTAATATATATTATATATATAAATTGTATGTGTTAAATATATATTTTATTTAATTAATCAAATAAAAAAACTCTATATAACCTATAGAGTTTATt‑‑atatatatatatatatatatatatata                                                                                                             <  1:4117426/126‑1 (MQ=255)

                     cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATATATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑atatatatatatatatatatatatatgc                                                                                                            <  2:4168808/128‑3 (MQ=255)

                      aTTTTTAATAAATAATAGAAATAAAAAATGTATTATTAAAATAAATATTTTAGGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatcattaactc                                                                                                           <  2:3413957/128‑10 (MQ=255)

                         tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatgcaagcg                                                                                                           >  1:3698814/1‑118 (MQ=255)

                         tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatgcaagcg                                                                                                           <  2:3698814/125‑8 (MQ=255)

                          ttAATAAATATTAGAAATATAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCTATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgcaagcg                                                                                                       <  2:2520741/128‑8 (MQ=255)

                            aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatgcaagagataa                                                                                                     >  2:682691/1‑117 (MQ=255)

                            aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑atatatatatatatatatatatatatgaaagagat                                                                                                     >  1:1781962/1‑119 (MQ=255)

                            aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                                     >  1:4380559/1‑128 (MQ=255)

                               aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGAAAAAAACTCAATATTACCTATAGAGTTTATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAg                                                                                                <  1:1002023/128‑1 (MQ=255)

                                 atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                              >  1:4039816/1‑128 (MQ=255)

                                  tatTAGAAATAAAAATTGTTTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAA‑‑‑‑‑‑AGATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                           <  1:1309446/128‑1 (MQ=255)

                                  aatTATATATAAAAATTTTATTTTTAAAATAAATATATTAGCTAATTAAGCAAATATAAAAACTCCATATTACATATAGAGTTAATT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGc                                                                                               <  1:4538535/127‑1 (MQ=255)

                                   atTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                          <  1:573061/128‑1 (MQ=255)

                                    ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                           >  2:2187178/1‑128 (MQ=255)

                                     tAGAAATAAAAATTGTATTTTTATAATAAATATTTTATTAAATGAAGCAAAGAAAAAACCTACATATTAACTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATaaa                                                                                          <  2:1801057/128‑1 (MQ=255)

                                     tAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATCAACGCGATCAGCATa                                                                                            >  1:3098790/1‑128 (MQ=255)

                                      ataaaTAAAAATATTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGAAAAAACCTCTATATTACATATAGAGTTAAAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                           <  1:1630810/126‑1 (MQ=255)

                                          aTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCAGAAAATGGTGa                                                                                   >  2:3590711/1‑128 (MQ=255)

                                              aaaTTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                             <  1:3035382/128‑1 (MQ=255)

                                              aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAAATA‑AT‑AAAGCGATCAAAAAAAAATgtataaa                                                                                 >  1:2424553/1‑122 (MQ=255)

                                               aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                            <  1:382438/128‑1 (MQ=255)

                                                  tGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAATCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                             <  2:1212983/128‑1 (MQ=255)

                                                  tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATA‑‑‑A‑ATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                                >  2:3296342/1‑123 (MQ=255)

                                                   gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                        >  1:3355124/1‑128 (MQ=255)

                                                    tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                       <  1:3272942/128‑1 (MQ=255)

                                                     aTTTTTATAATAAATATTTTATTTAATGAATCAAAGATAAAACCTCCATATTATCTATAGAGTTAAT‑‑‑‑‑‑TATATTTAAATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                        <  1:109165/128‑1 (MQ=255)

                                                     aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAATTGGTGATATTTAgct                                                                          >  2:4060235/1‑126 (MQ=255)

                                                       ttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGAAAGCGATAATCATAAAAT‑GTTAAAATTAGATCtaaa                                                                     >  2:3950709/1‑125 (MQ=255)

                                                        tttAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                       <  2:334338/128‑1 (MQ=255)

                                                        tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCATCAGAAAATTGTGAAATTTatctc                                                                         >  2:304906/1‑124 (MQ=255)

                                                          tAAAATAAATTTTTTATTAAATGAATCAAATCAAAAACCACTATATTAAATATAGAGATAATG‑‑‑T‑TATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                     <  1:936805/128‑1 (MQ=255)

                                                          tAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                                   <  2:2434794/128‑1 (MQ=255)

                                                          tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATTGTTAAATTTATATCTg                                                                       >  1:2057062/1‑128 (MQ=255)

                                                          tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCATAATAAAATGGTGAAATTTAGATCTGAg                                                                     >  1:3507945/1‑128 (MQ=255)

                                                          tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                     >  2:4553265/1‑128 (MQ=255)

                                                          tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGCTATAATAATAAAATGGATATATTTTTATCTGAg                                                                     >  2:617130/1‑128 (MQ=255)

                                                           aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAGATATgttt                                                                    >  1:2668375/1‑125 (MQ=255)

                                                             aatatataTTTTATGAAATGATGCAAAGAAAAAACCTCTATATTATCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg                                                                  <  2:1277141/128‑1 (MQ=255)

                                                                  atatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                             >  1:4172213/1‑128 (MQ=255)

                                                                      tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGTTGAAATTTAGAAGTTATTTGGTATTAAAt                                                         >  1:3183366/1‑128 (MQ=255)

                                                                       ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                      >  2:1575032/1‑128 (MQ=255)

                                                                        tAGGAAATGAATCAAATAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt                                                         <  2:447588/128‑1 (MQ=255)

                                                                        tAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                           <  2:2366612/128‑1 (MQ=255)

                                                                           gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                                  >  1:997469/1‑128 (MQ=255)

                                                                            aaaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATGCTAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                       >  1:3454227/1‑128 (MQ=255)

                                                                              aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCTATCAGCATAAAATTGTGATATTTAGATCTGAGTTAGTCATAAATTTATAtttat                                               >  1:2003347/1‑126 (MQ=255)

                                                                                 aagcaaagcaAAAACCTCCATATTACATATAGAGTTAATG‑‑ATATATATATATAT‑‑‑T‑TATATATATGCACTCGATCACCATAAAATTGAGAAATTTAGATCTGATTTTGTATTAATTTTGTAGTTgttat                                            >  1:2977205/1‑128 (MQ=255)

                                                                                   gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA‑AT‑CTATCGAACAGAATAAAATTCTGAAATTAAGATCTGAGTTTGTCTTAAATTTTTAGTTtttat                                            >  2:2689853/1‑128 (MQ=255)

                                                                                   gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAATCGATCAGCATAAAATTGTGATATTTAGATATGAGTTGGTCATAAATTTTTAGTTtttat                                            >  1:2310385/1‑128 (MQ=255)

                                                                                       agcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTAAGTTTTTATTtatat                                      >  1:1509783/1‑127 (MQ=255)

                                                                                         caaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGCTCTGAGTTGGTCTTAAATTTGTAGTTTttatttattg                                      >  1:1168468/1‑126 (MQ=255)

                                                                                          aaaaaCCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGt                                     <  1:1938333/128‑1 (MQ=255)

                                                                                             aaCCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑T‑CAAGCGATCAGCATAAAATAGTGAAATTTATATCTGAGTTGATCTTAAATTTTTAGTTTTTATTTATAGTTta                                  >  2:2073918/1‑128 (MQ=255)

                                                                                             aaCCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                                >  2:729498/1‑128 (MQ=255)

                                                                                              aCCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATTGAGAAATTTAGATCTGAGTTGGTCATATATTTGTATTTTTTATATATAGTTtat                                 >  2:431335/1‑128 (MQ=255)

                                                                                               ccTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta                                  >  2:2594666/1‑128 (MQ=255)

                                                                                                cTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATATATAGTTTATaa                               >  1:696372/1‑128 (MQ=255)

                                                                                                cTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGAAAGAGATCAACATAAAATTGTAAAATTTAGATATGATTTTGTAATAAATTTCTATTTTTTATTTAAATTATATaa                               >  1:1728281/1‑128 (MQ=255)

                                                                                                 tCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTATAGTATTTATTTATAGtatata                                >  1:2540680/1‑128 (MQ=255)

                                                                                                  ccATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaa                               >  1:522844/1‑128 (MQ=255)

                                                                                                   cATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCACGCGATCAGAATAAAATGGTGAAATTTATATCTGAGTTTGTCTTATATTTTTAGTTTTTATATATTTTTTATAAAGt                            >  2:3769769/1‑128 (MQ=255)

                                                                                                   cATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGt                            <  2:4398537/128‑1 (MQ=255)

                                                                                                   cATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATATTTTATATAGt                            >  1:2205476/1‑128 (MQ=255)

                                                                                                   cATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCATCATAAAATGTTGAAATTTAGATGTGAGTTGGTAATAAATTTTTTGTTTTTATTTATAGTTTATAAAtttt                          >  1:4244421/1‑127 (MQ=255)

                                                                                                      atTAGCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                           <  2:4247014/128‑1 (MQ=255)

                                                                                                       ttACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑T‑CAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTTTTTTTTTTTTATATATTTTATAATGTttat                        >  1:4442451/1‑128 (MQ=255)

                                                                                                       ttACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaat                        <  2:3183366/128‑1 (MQ=255)

                                                                                                       ttACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATATTtaatta                      >  2:532439/1‑126 (MQ=255)

                                                                                                                gagTTAATG‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt               <  2:1476579/128‑1 (MQ=255)

                                                                                                                      gttaattatatatatatatatatatatatatatGCAAGAGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt             <  2:2273415/122‑1 (MQ=255)

                                                                                                                         aatgatatatatatatatatatatatatatGCAAGCGATCAGAATAAAATGGTTAAATTTATATCTGATTTTGTCTTAAATTTGTATTTTTTATATATTGTTTATAAAGTTAATAATTTAGATTTTTa          >  2:1146405/5‑128 (MQ=255)

                                                                                                                         aatgatatatatatatatatatatatatatGCAAGCGATCAGAATAAAATGGATAAATATAGATCTGATTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATATATATAATAATTTAGATTTTTa          >  2:1894494/5‑128 (MQ=255)

                                                                                                                           aatgatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat        >  1:2599868/5‑128 (MQ=255)

                                                                                                                             tgatatatatatatataaatatatatTCAAGCGATCAGCATAAATTGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAatat      <  1:3590711/126‑1 (MQ=255)

                                                                                                                                 atatatatatatatatatatatGCAATAGATCATCATAAAATTTTGAAATTTATATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTa  <  2:849781/128‑1 (MQ=255)

                                                                                                                                 atatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATATAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTa  <  1:1847623/128‑1 (MQ=255)

TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTTA  >  CP016816/437760‑438014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.