New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 34949 =2119 (1.010)215 (0.110) 118/228 21.9 10.3% intergenic (+53/+113) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
?CP016816 = 34945 1818 (0.950)intergenic (+49/+117) JCVSYN2_00105/JCVSYN2_00110 ABC transporter permease/cell division protein FtsH
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2348 total aligned reads displayed.

ACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTATC  >  CP016816/34822‑35076
                                                                                                                                |                                                                                                                               
 cttattTATGAGTTTCAACAAAAATCGTAATAAATGATGAACCAATTAAAATGCTAAGGGAATTTTATTAATAATAAAACATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTTaaaaa                                                                                                                                <  1:795022/128‑1 (MQ=255)
      ttATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGT‑AATTTTAATCATAATAAAAGTATAAACCAAAAAAATTTTGTTTTGTTTTTTTATTTTCATATTAaaaaaaaaaa                                                                                                                           >  2:1596831/1‑128 (MQ=255)
        ttgtttttAAAAAAAAATATTAATAAATTGTTAAACAAGTAAAATGCTAAGTGTATTTGATTAATAATAAAAGTTTAAACAAAATAAATTGTGTTTGGTTTTTTTTTTTAC‑TATTGaaaaaaaaaaaa                                                                                                                         <  1:3487233/123‑1 (MQ=255)
        aTGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGATAATTTATTTAC‑TATTGaaaaaaaaaaaa                                                                                                                         >  1:4303601/1‑128 (MQ=255)
           aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTTGTTTTTTTATTTAC‑TATTaaaaaaaaaaaaaaaa                                                                                                                      >  2:2807698/1‑128 (MQ=255)
           aGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGaaaaaaaaaaaaaaa                                                                                                                      >  1:2008292/1‑128 (MQ=255)
            gTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATTAATAATAAAATATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTAC‑TATTTaaaaaaaaaaaaaata                                                                                                                     >  2:2473860/1‑126 (MQ=255)
            gTTTAAACAAAAAGAGTAATAAATGCTTAACCAAGTACAATGCTAAGTGATGTTGATGAATAATAAAAGATTAAACCAAATAAATTGTGTTTGGTTTTTTTATTTAA‑TATTTaaaaaaaaaaaaaata                                                                                                                     <  1:445311/128‑3 (MQ=255)
               tCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAataata                                                                                                                 >  2:4343371/1‑128 (MQ=255)
                 aacaaAAACTTTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATTAAAAATAAAATATTAAACCAAATAAATTGTTTTTGGTTTTTTTATTTAC‑TATT‑TAAAAAAAAAAAAAataatata                                                                                                               <  2:1968722/128‑1 (MQ=255)
                  acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTCGTTATTTTATTTAC‑TATT‑‑AAAAAAAAAAAAAataatataat                                                                                                             >  1:2959541/1‑128 (MQ=255)
                  acaaAAAGAGTAAGAAATGCTGAACCAAGTACAATGATAATTGAAGTTGATTAATAATAAAAGATTAAACCAAATTCATTGTTTTTGGTTTTTTTATTTAC‑TATT‑TAAAAAAAAAAAAAataatataa                                                                                                              <  2:3489768/128‑1 (MQ=255)
                   caaAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAaataaaaaaa                                                                                                              >  1:3197124/1‑123 (MQ=255)
                     aaaattgTAATAAATGTTTAACCAAGTACAATGCTAATGTAAGTTTATGAATAATAAAATATTAAACCAAATACATTTTGTTTGGTTTTTTTATTTAC‑TATTG‑‑AAAAAAAAAAAAATAATATAATTTg                                                                                                          <  2:1534956/122‑1 (MQ=255)
                     aaaaGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTAGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAAttt                                                                                                           >  1:2082408/1‑128 (MQ=255)
                        atagTAACAAATGCTGAACCAATTACAATGCTAAGTGAATTTTATTAATAATAAAATATTAAACCAAATAAATTGTTTTTGGTTTTTTTATTTAA‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCa                                                                                                        <  2:4113163/126‑1 (MQ=255)
                         gagTAAGAAATGCTGAAACAAGTACAATGCTAAGTGAAGTTTATGAATAATAAAAGATTAAACCAAATACATTGAGTTTGGCTTTTTTATTAAC‑TATTGAAAAAAAAAAAAAAATAATATAAtttaat                                                                                                        >  1:3396897/1‑125 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGTTTTTTTTATTTAC‑TATT‑TAAAAAAAAAAAAAATAATTTAAattaaaaac                                                                                                     >  1:2260780/1‑122 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑‑AAAAAAAAAAAAATAATATAATTTGCAAACt                                                                                                    >  2:744252/1‑128 (MQ=255)
                           gTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATATAC‑TATTGAAAAAAAAAAAAAAAAAAAAAAAttgcaaac                                                                                                      >  1:2521822/1‑122 (MQ=255)
                             aaGAAATGCTTAACCAAGTACAATGCTAAGTTAAGTTTATTAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATT‑‑TAAAAAAAAAAAAATAATATAATTTGCATACtat                                                                                                  <  1:4042669/128‑1 (MQ=255)
                              cgAAATCCTGAACCACTCCAAATGCTAAGTGAAGTTGATGAATAATAAAAGATAAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑‑AAAAAAAAAAAAATAATATAATTTGCATACtata                                                                                                 <  2:3065798/127‑1 (MQ=255)
                              aGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAA‑AATATAATTTGAATAatat                                                                                                  >  1:567924/1‑128 (MQ=255)
                                aaaTGCTTAACCAATTAAAATGCTAAGTGAATTTTATTAATAATAAAATATTAAAACAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATaa                                                                                                <  2:2723594/128‑1 (MQ=255)
                                 aaTTCTTAACCACTTACAATGCTAAGTGAAGTTGATTAATAATAAAATATAAAACCAAATACATTGGTTTTGGTTTTTTTATTTAA‑ATTTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATaa                                                                                                <  2:292528/128‑1 (MQ=255)
                                  attcttaaCCAATTAAAATGTTAATTGTAGTTTATTAATAATAAAATATTAAACCAAAAACATTTTTTTTGGTTTTTTTATTTAA‑TATT‑‑‑‑TAAAAAAAAAAATAATATAATTTGCATACTATAAAAAAt                                                                                           <  2:1320835/122‑1 (MQ=255)
                                  aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATaaaa                                                                                              >  2:4414512/1‑128 (MQ=255)
                                  aTGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATaaaa                                                                                              >  2:4265886/1‑128 (MQ=255)
                                   tGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATAAAATTTTAAAAATATaaaaa                                                                                             >  2:123810/1‑128 (MQ=255)
                                    gCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGATTGGTTTTATTATTTAC‑TATTGAAAAAAAAAAAAAAATAATATAAATTGAATAATATaaaaa                                                                                             >  2:1912013/1‑128 (MQ=255)
                                     cgtgaCCAAGTACATTTCTATGTGAATTTTATTAATAAAAAAATATTAAACAAAATATATTGTGTTTGGTTTTTTTTTTAAC‑TAAT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAAt                                                                                           <  1:913654/124‑1 (MQ=255)
                                          ccAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATAAAATTTAAAAAAAATAAAAAAtttttt                                                                                      >  1:2803101/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAA‑‑AATATAATTTGCATACATAAAAAAATTGTTTTTc                                                                                   >  1:3647755/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATATTATAATTTGAATACTATAAAAAAtttttttt                                                                                    >  2:1165709/1‑128 (MQ=255)
                                            aaGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACAAAATACATTGTGTTTGATTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAAAAAAATTTG‑AAAAAATAAAAAAATtttttta                                                                                   >  1:3576678/1‑127 (MQ=255)
                                              gTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑‑AAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTaaa                                                                                 >  2:2638297/1‑128 (MQ=255)
                                              gTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATT‑TAAAAAAAAAAAAAATAAAATAATTTAAATAATATAAAAAATTTattttaa                                                                                  >  1:12225/1‑126 (MQ=255)
                                                    ttttaattttaGTTTATTAATAATATTATATTTAACAAAATAATTTTTTTTTTGTTTTTTTATTTA‑‑TAATTTAAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTGTTTTTCAAATAAg                                                                            <  1:1133437/118‑1 (MQ=255)
                                                    tGCTAAGTTAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑‑AAAAAAAAAAAAATAATAAAATTTGAATAATATAAAAAATTTTTTTTAAAATaatt                                                                           >  1:2885746/1‑126 (MQ=255)
                                                     gctaattttaGTTTATTAATAATAAAAGTTTAAACTAAATAAATTTTTTTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGt                                                                           <  1:3106678/119‑1 (MQ=255)
                                                           tGAAGTTTTTTAATAATAAAATATTAAACCAAATACATTTTTTTTGGTTTTTTTATTTAA‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAg                                                                     <  2:4188648/128‑1 (MQ=255)
                                                           tGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTAAAAATAAGTATTCAg                                                                     >  2:3674863/1‑128 (MQ=255)
                                                             aattttattaataatAAAAGATTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGa                                                                   <  2:1089483/119‑1 (MQ=255)
                                                             aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATATATTGCATAATATAAAAAATTTTTTTAAAAAAAATTAtaaaaaa                                                                   >  2:849063/1‑122 (MQ=255)
                                                             aaGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTTTTTTTCAAATAACTATTAAgta                                                                   >  2:1391549/1‑126 (MQ=255)
                                                               ttttattaataatAAAAGATTAAACAAAATAAATTGTGTTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGt                                                                 <  2:1474813/121‑1 (MQ=255)
                                                                tttattaataatAAAAGATTAAACCAAATAAATTGGGTTTGGTTTTTTTTTTTAA‑TATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGt                                                                 <  1:2597182/122‑1 (MQ=255)
                                                                    ttaataatAAAATATTAAACAAAATACATTGTGTTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAAtt                                                            <  2:2548594/126‑1 (MQ=255)
                                                                     gaATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAATAAAATAATTTGCATAATATAAAAAATTGTTTTTCAAATAATTATTAAGTATAAAAtt                                                            >  1:2350449/1‑128 (MQ=255)
                                                                      aataatAAAATTTTAAAAAAAATAAATTTTGTTTGGTTTTTTTTTTTAA‑TTTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAAttt                                                           <  1:3884275/128‑1 (MQ=255)
                                                                         aataaAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTTCATACTATAAAAAATTTTTTTTCAAATAATTATTAATGAGTAAATTTaaaa                                                       >  2:3419049/1‑128 (MQ=255)
                                                                           taaAAATTTAAACCAAATTAATTTTTTTTGTTTTTTTTATTTTA‑TATTTAAAAAAATAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTaaaaa                                                      <  2:3155794/128‑1 (MQ=255)
                                                                             aaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAATAATATAATTTGAATACTATAAAAAATTTTTTTAAAAATAATTTATAATTATAAAATTTAAAAAAc                                                    >  2:921038/1‑128 (MQ=255)
                                                                             aaaGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGAATAATATAAAAAATTTTTTTTAAAATAATTATTCAGGATTAAATTTAAAAAAcc                                                   >  1:1075367/1‑128 (MQ=255)
                                                                              aataTTAAACAAAATACATTGTGTTTGGTTTTTTTATTTAT‑TATT‑‑TAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCaa                                                 <  2:4533759/125‑1 (MQ=255)
                                                                               taaaaaaaCCAAACACATTGTATTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAATTAAGTATTCTGGTGTAATTTTAAAAAACCaa                                                 >  2:3573775/6‑128 (MQ=255)
                                                                               ataTTAAACAAAATAAATTTTGTTTGGTTTTTTTATTTAA‑TATTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCa                                                  <  2:491623/126‑1 (MQ=255)
                                                                                 aTTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAA‑AAAATAATTTGCATACTATAAAAAATTATTTTTAAAATAAATAATAATGATTAAATATaaaaaaaaaaaa                                               >  1:2448317/1‑122 (MQ=255)
                                                                                 aTTAAACCAAATAAATTTTGTTTGTTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAaga                                               <  2:3873958/128‑1 (MQ=255)
                                                                                 aTTAAAAAAAATAAATTGTGTTTGTTTTTTTTTTTTAA‑TATTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAag                                                <  2:3949702/128‑1 (MQ=255)
                                                                                   tAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAATTATTCATGAGTAAATTTAAAAAACaaatatt                                             >  1:1500101/1‑124 (MQ=255)
                                                                                   tAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑‑‑AAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGAAAATTTAAAAAACCAATAGTta                                           >  1:3784931/1‑128 (MQ=255)
                                                                                    attttttatattttGTTTTTTTTTTTTTTTTTTA‑‑TTTTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACAAAGAttt                                            <  1:2668616/116‑1 (MQ=255)
                                                                                    aaaCCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGTAGTAAATTAAAAAAACCAAGAGtt                                            >  1:3977077/1‑128 (MQ=255)
                                                                                      acaaaaTACATTTTTTTTGTTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTtat                                          <  2:1689989/125‑1 (MQ=255)
                                                                                      aaaaaaTACATTTTGTTTGGTTTTTTTATTTAA‑TATTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTta                                           <  2:3311851/125‑1 (MQ=255)
                                                                                      aCCAAAAACATTGTGTTTGGTTTTTTAATTTAC‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtat                                          <  1:490680/128‑1 (MQ=255)
                                                                                       ccAAATACTTTGTGTTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  1:2176030/128‑1 (MQ=255)
                                                                                       caaaataaatTGTTTTTGGTTTTTTTATTTAA‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  2:1784682/126‑1 (MQ=255)
                                                                                       caaaaTATTTTGTTTTTTGTTTTTTTATTTTA‑T‑TTTTAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTtata                                         <  1:157346/126‑1 (MQ=255)
                                                                                        cAAATACTTTTTGTTTGGGTTTTTTTTTTAA‑ATTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTtata                                         <  1:4136353/128‑1 (MQ=255)
                                                                                        cAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAA‑AATATAATTTTCATAATATAAAAAATTTTTTTTAAAATAATTATTAATTATTAAATTTAAAAAAACAATATTTATaa                                        >  1:1694431/1‑128 (MQ=255)
                                                                                         aaaTACATTGTGTTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAATTATTCAGGATTAAATTTAAAAAACCAAGAGTTAaaaa                                       >  1:1310611/1‑128 (MQ=255)
                                                                                          aaTACATTGTGTTTGTTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATaact                                      <  2:3763068/128‑3 (MQ=255)
                                                                                           taagatttggtttgtttTTTTTATTTAA‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATATAAAAAACCAAGAGTTATAAATc                                     <  2:2866201/119‑1 (MQ=255)
                                                                                                  tttttttGTTTTTTTAATTAA‑TATAG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGATTTATAACTCTTGGttt                              <  2:660967/125‑1 (MQ=255)
                                                                                                  ttgtTTGGTTTTTTTATTTAA‑TATT‑TAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttt                              <  1:1422727/127‑1 (MQ=255)
                                                                                                    gtTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAATAATAAAATTTGCATACAATAAAAAATTGTTTTTCAAATAATTATTCAGTATTAAATTTAAAAAACAAATAGTAAAAAATAtttttttt                             >  1:1785308/1‑128 (MQ=255)
                                                                                                    gtTTGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTGTTTTTAAAATAATTATTCAGTAGTAAATTTAAAAAACCAAGATTTATAAATATTGtttttt                            >  1:3702234/1‑128 (MQ=255)
                                                                                                     tttGTTTTTTTTTTTTAA‑ATTTTAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGttttt                            <  1:4523187/128‑1 (MQ=255)
                                                                                                       tGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTTAATTTAAAAAACCAAGAGATATAAATCTTGCTTTTTTGt                         >  1:1001134/1‑128 (MQ=255)
                                                                                                       tGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGTGTTATAAATCTTGGtttttttt                         >  2:2087086/1‑126 (MQ=255)
                                                                                                       tGGTTTTTTTATTTAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTTTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACAAAGATTTATAAATATTTGTTTATTga                         >  2:1840640/1‑127 (MQ=255)
                                                                                                             ttttttttAC‑TATTG‑AAAAAAAAAAAAAATAATATAATTTGCATACTTTAAAAAATTGTTTTTCAAATAAGTATTCAGTAGTAAATTTAAAAAACAAATAGTTATAAATCTTGGTTTTTTTTTTatat                   >  2:2400836/1‑128 (MQ=255)
                                                                                                             ttttATTTAC‑TATTGAAAAAAAAAAAAAATTAATATATTTTGAATACTTTAAAAATTTGTTTTTAAATTAATTTTTAAGTATTAAATTTAAAAAAAAAATCTTTATAAATATT‑TTTTTTTTTTtatta                   >  2:403539/1‑126 (MQ=255)
                                                                                                                aatttaA‑TATTT‑AAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattat                <  1:4385403/127‑1 (MQ=255)
                                                                                                                    tttaatatttaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTAtattatta              <  1:646274/118‑1 (MQ=255)
                                                                                                                    taC‑TATTGAAAAAAAAAAAAAAATAATATAATTTGCATAATATAAAAAATTTTTTTTAAAATAATTATAAAGGAGTAAATTTAAAAAACCAATAGTTATAAATATTGGTTTTTTTTTTAtattatttt             >  1:3033350/1‑126 (MQ=255)
                                                                                                                      c‑TATTGAAAAAAAAAAAAAAATAAAATAATTTGAATAAAATAAAAAATATTTTTTCAAAAAAATATTAAGTAATAAATTAAAAAAACCAATAATTATAAAAATTGGTTTTTTTTTTatatttatattt           >  1:1960787/1‑128 (MQ=255)
                                                                                                                       tcttttgaaaaaaataaaaaaTAATATAATTTGCATAATATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAATAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTAttt           <  2:3009244/121‑1 (MQ=255)
                                                                                                                          ttttaaaaaaaaaaaaaaTAATATAATTTGAATACTATAAAAAATTGTTTTTCATATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTc        <  2:3217522/124‑1 (MQ=255)
                                                                                                                          ttGAAAAAAAAAAAAAAATAATATAATTTGCTTACTTTAAAAAATTGTTTTTAAAATAAGTATTCAGGTTTAAATTTAAAAAACCAAGAGTTATAAATATTGTTTTTTTGTTGATTTTTTTATTTGtg        >  2:1013369/1‑127 (MQ=255)
                                                                                                                          ttGAAAAAAAAAAAAAAAAAATAAAATTTGAATAAAAAAAAAAATATATTTTAAAATAATTATTAAGAATTAAATAAAAAAAACAAAAAATAATAAATATTATTTTTTTTTTTAATATATTAttttta        >  1:1858204/1‑125 (MQ=255)
                                                                                                                          attgaaaaaaaaaaaaaaTAATATAATTTGCATACTTTAAAAAATTGTTTTTCAAATAAGTATTAAGGAGTAATTTTAAAAAACAAATATTTATAAATCTTGGTTTTTTGTTTTAATTATTATTTTTc        >  2:2186181/5‑128 (MQ=255)
                                                                                                                          attgaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTAATGATTAAATTTAAAAAACAAATATTTTTAAATATTGTTTTTTTGTTTTTTTTAtttttttta        >  2:2284002/5‑125 (MQ=255)
                                                                                                                          attcaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTc        <  2:575310/124‑1 (MQ=255)
                                                                                                                            ttgaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCATGAGTTATAAATCTTGGTTTTTTGTTTATTTTTTTATTTGTCtt      >  2:4473781/4‑128 (MQ=255)
                                                                                                                            ttaaaaaaaaaataaaTAATATATTTTGCATACTATAAAAAATTGTTTTTTAAATAAGTATTCAGGAGTATATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCtt      <  2:3629812/126‑1 (MQ=255)
                                                                                                                            tgaaaaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCtt      <  1:4217039/126‑1 (MQ=255)
                                                                                                                                aaaaaaaaaaaaTAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTAtc  <  2:203679/128‑1 (MQ=255)
                                                                                                                                |                                                                                                                               
ACTTCTTTATGAGTTTCAACAAAAAGAGTAAGAAATGCTGAACCAAGTACAATGCTAAGTGAAGTTGATGAATAATAAAAGATTAAACCAAATACATTGTGTTTGGTTTTTTTATTTAC‑TATTGAAAAAAAAAAAAAAATAATATAATTTGCATACTATAAAAAATTGTTTTTCAAATAAGTATTCAGGAGTAAATTTAAAAAACCAAGAGTTATAAATCTTGGTTTTTTGTTTATATTATTATTTGTCTTTATC  >  CP016816/34822‑35076

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.