Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP016816203,9460CA32.3% 3208.8 / 278.0 1848intergenic (+330/+128)JCVSYN2_00845/JCVSYN2_00850lipoprotein/inorganic diphosphatase
Reads supporting (aligned to +/- strand):  ref base C (601/615);  new base A (453/127);  total (1077/771)
Fisher's exact test for biased strand distribution p-value = 3.57e-32
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1885 total aligned reads displayed.

TGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTTTATTAAATTA  >  CP016816/203817‑204073
                                                                                                                                       |                                                                                                                               
   aaaaaaTACTATTTTGTAGGCTTTTTATTATTCTTTACAACATTAAAACGCTTTCAAAGTGTT‑TTTTTTT‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAAc                                                                                                                                 <  2:6039225/128‑1 (MQ=255)
    aaaaaGCCAATTTTCTAGGCTTTTTATTAAAATTATAAACATTACAACGGTTTAAAATTGTA‑TTTTTTA‑GG‑TTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACt                                                                                                                                <  1:937176/128‑1 (MQ=255)
     aaaaGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑TG‑CTTG‑‑‑‑TTTTTTTTTTTTTTTGTAAAAATAAAATTAAGATTTGGATAAAACAAAAAtata                                                                                                                             >  2:6450292/1‑128 (MQ=255)
         gCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAATATAATTTGGATAAACCAACACTatata                                                                                                                           >  2:7819467/1‑127 (MQ=255)
           cTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTTATATTTGGTTAAACCAAAAATATATaaa                                                                                                                         >  1:2579010/1‑128 (MQ=255)
            tATGTTATAGTATTTTTATTATAATTATAAAAATTAAAAATCTTTAAAATTTTA‑TTTTTTA‑GG‑CTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCaaaa                                                                                                                       <  2:760163/128‑1 (MQ=255)
                ttCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGTTAAACAAAAAATATATaaaaaaaa                                                                                                                    >  1:7605994/1‑128 (MQ=255)
                acatAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAATAATATTTGGATAAAACAAAAAAATATaaaaaaaa                                                                                                                    >  2:2847122/4‑128 (MQ=255)
                 tCTAGTCTTTTTATTATACTTATAAAAATTACAATGCTTTCATAGTGTT‑TTTTTTA‑GG‑CTTG‑‑‑‑TTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTa                                                                                                                 <  1:6262973/128‑1 (MQ=255)
                  cTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTT‑TAAAAAATAAATTAATATTTTGATCTACCAAATAAATATAAAAAAAAATaa                                                                                                                >  2:6285595/1‑128 (MQ=255)
                   tAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAAAAAAATTAATATTTGGATCAACCAAAACTATATCAAAAAAATTa                                                                                                                 >  2:6106205/1‑128 (MQ=255)
                    aGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTTGATAAACAAAAAATATTTAAAAAAAAtt                                                                                                                  >  2:3230055/1‑128 (MQ=255)
                    aGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGATCAACCAAAACTATATCAAAAAAATTaa                                                                                                                >  2:2714969/1‑128 (MQ=255)
                    aGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAATTTAAAATTTGTATAAACCAAAA‑AATATAAAAAAAAtataa                                                                                                               >  1:5951293/1‑124 (MQ=255)
                     tgttttttATTATACTATTAAAAATTACAACGCTTTAAAATTGTATTTTTTTG‑GG‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaa                                                                                                               <  1:840317/125‑1 (MQ=255)
                       cTTTTTATTATAATTTTATAAATTAAAAAGCTTTAAAAGTGTT‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaaaa                                                                                                            <  1:7310892/128‑1 (MQ=255)
                         ttttATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTTATATTTTGTTAAACAAAAAATATATAAAAAAAATTaaaaaaa                                                                                                           >  2:1801655/1‑128 (MQ=255)
                         ttttATTATAATTATAAAAATTACAACGCTTTAAAAGTTTA‑TTTTTTT‑GGTTTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTATGATTTGGATCAACCAAAACTATATCAAAAAAATTaaaaaaa                                                                                                           <  1:1917946/128‑1 (MQ=255)
                          tttATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTTTAAAAAAAAAAAATATttaaaaaaaattaaaaaaaa                                                                                                          >  2:5717278/1‑128 (MQ=255)
                          tttATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAATTAAGATTTGTATTAAAAAAAAAAATATAAAAAAAATTaaaaaaaa                                                                                                          >  2:7719288/1‑128 (MQ=255)
                                 taCTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGTT‑TTTTTTTTTTTTTTTTTTAAAAAAAAAATTAATATTTTGTTCAACCAAAAAAATAAAAAAAAAATTAAAAAAAAtatttt                                                                                                    >  1:3444470/1‑128 (MQ=255)
                                   attttaaaCATTATATGGCTTTTAAAGTTTT‑TTTTTTT‑TG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTATAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagtttagt                                                                                                 <  1:5536390/122‑1 (MQ=255)
                                    ttATAAAAATTACAACGGTTTATAAGTTTT‑TATTTTATTG‑TTTT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAAtagtttagtt                                                                                                <  1:3148632/128‑1 (MQ=255)
                                     tATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAAATTTGTATAAACCAAAACTAAATAAAAAAAATATAAAAAAAtattttttttta                                                                                              >  1:7081408/1‑122 (MQ=255)
                                     tATCAAAATTAAAAATGTTTAAAATTTTA‑TTTTTTT‑TG‑TTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTg                                                                                               <  1:1757277/128‑1 (MQ=255)
                                       tCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAGTAATATTTTGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATATTTTATTTg                                                                                               >  1:6904346/1‑128 (MQ=255)
                                          aCATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTATAAAAAAAATTAAAATTTTTTTAAAACAAAAAAATATAAATAAAATTAAAAAATAtatttaatatattttta                                                                                         >  1:2975771/1‑116 (MQ=255)
                                          aCATTAAAAATCTTTAAAATTTTT‑TTTTTTATGA‑TTTT‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAGATTTTGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGttt                                                                                          <  1:6163111/128‑1 (MQ=255)
                                            aTTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAAAAAAAGTTATATTTGTATAAAAAAAAACTATATAAAAATAATTAAAAAAAATATTTTATTTTAAtttaa                                                                                        >  2:6708591/1‑126 (MQ=255)
                                                    gttttCAAATAGTT‑ATTTTTA‑TG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCa                                                                                <  1:7390040/126‑1 (MQ=255)
                                                    gCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAAGATTTGGATAAACCAAAACAATAAAAAAAAAATTAAAAAAAAAATTTTAATTGAGTTTAAAAtaatcat                                                                               >  1:4363596/1‑122 (MQ=255)
                                                      tttCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAATATTTGGATAAACCAAAACTATATAAAAAAAATTAAAAAAAATATTTTAGTTTAGTTTCAAAtaatcata                                                                              >  2:4277880/1‑121 (MQ=255)
                                                       ttCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTT‑TAAAAATAAAAATAAAATTTGTTTAAACCAAAAAAATA‑AAAAAAAAATAAAAAAAAAAATTTATTTTAATTTTAAAtattaaattttt                                                                          >  1:1515421/1‑117 (MQ=255)
                                                        tCAAAGTGTA‑TTTTTTA‑GG‑CTTGTT‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATTTTTTTTTAAAACAAAATTTTATAAAAAAAATTAAAAAAAATATTTTTTTTGATTTTAAAATCTatatat                                                                             >  2:5827250/1‑128 (MQ=255)
                                                        tCAAAGTGTA‑TTTTTTA‑GG‑CTTGTT‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAATATTTGGATCAACCAAAACTAATTAAAAAAAATTAAAAAAAATTTTTTAGTTTATTTTAAAATATGAatat                                                                             >  2:7330456/1‑128 (MQ=255)
                                                        tCAAAGTGTA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAATAAGATTTGGATAAACCAAAAATATATAAAAAAAATTAAAAAAAATAATTTATTTTATTTTAAAATATGAatata                                                                            >  2:4615306/1‑128 (MQ=255)
                                                              tttttttttttT‑GG‑TTGT‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTAc                                                                      <  1:2012861/123‑1 (MQ=255)
                                                               gtA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAATATTTGGATAAACCAAAACTATATAAAAAAAATTAAAAAAAATATTTTAGTTTATTTTCAAAAATGAATATATATTaaa                                                                     >  2:2224376/1‑126 (MQ=255)
                                                                tA‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAAAATTTGGAACAACCAAAACTATATAAAAAAAATTAAAAAAAATATTTTATTTAAGTTACAAATCTGAATATATTGAACaa                                                                    >  2:7059596/1‑128 (MQ=255)
                                                                 a‑TTTTTTA‑GG‑CTTGT‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAATTAATATTTTGTTAAACCAAAAATTTTAAAAAAAAATTAAAAAAAATATTTTATTTGATTTTAAAATATGAaaataatttaaaaa                                                                   >  2:6792218/1‑119 (MQ=255)
                                                                       ttA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTTTAAAAATAAAAGTAATATTTGGATCAACCAAAAATATATAAAAAAAATTAAAAAAAATAGTTTATTTGAGTTTAAAATCTGAATATATAGTTCAaattaatt                                                             >  2:3604331/1‑128 (MQ=255)
                                                                          tttttttttttttttttttttttttttttTAAAATTAAATTTATTTTTTGTTTAAACAAAAATATATTAAAAAAATTTAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGaa                                                               <  1:2759304/117‑1 (MQ=255)
                                                                             ttttttttttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt                                                            <  1:6716439/120‑1 (MQ=255)
                                                                             ttgtttgtttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAAttt                                                            <  1:4021192/120‑1 (MQ=255)
                                                                               ttG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGTATCAACCAAAACTATATAAAAAAAATTAAAAAAAATTTTTTAGTTGTGTTTAAAAAATGAATATTAATTAAAAATGAATTtattat                                                       >  2:4168621/1‑128 (MQ=255)
                                                                                  tttttttttttttttttttttATAATTAAAATTAATATTTTTATTAAATAAAAATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTTAAATATGCATATATAGTACAAAGGAATTTATGAt                                                       <  1:1021409/125‑1 (MQ=255)
                                                                                  tttttttttttttttttttGTAAATATATATTTATGATTTTTATAATTTATATATATATTAAAAAAATTAATAAATATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGAt                                                       <  1:5785168/125‑1 (MQ=255)
                                                                                   gtttttttttttttttttttAAAAATAAAATTAAGATTTTGATCAACCAAAACTTTATAAAAAAAATTAAAAAAAAAATTTTATTTTAGTTTCAAATATTCATATAAAATAAAAAGGAATTTAttaaa                                                      >  2:7914972/3‑124 (MQ=255)
                                                                                    tttttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAg                                                     <  2:6519958/127‑1 (MQ=255)
                                                                                     ttttttttttttttttGTAAAAATAAAAGAAAGATTTGTATAAACAAAAAATAAAAAAAAAAAATTAAAAAAAATATTTTTTTTTTTTTTAAAATATTAATATAAATTAAAAATCAATTAATGATata                                                    >  2:4703091/1‑126 (MQ=255)
                                                                                      tttttttttttttttGTAATAATAAAAGTAAGATTTGGATCAAACAAAATTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaa                                                   <  2:4486530/128‑1 (MQ=255)
                                                                                      tttttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaa                                                   <  1:6039739/128‑1 (MQ=255)
                                                                                       tacttttatttttaCAAAAAAAAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTTAGTTTCAAATATGCATATATAGTACAAAGGAATTTATGATAGaaa                                                  >  2:2563137/4‑128 (MQ=255)
                                                                                         ttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATTTAAAAAAAATTAAAAAAAATAGTTTTTTTTATTTTCAAATGAGCATATATTTTAAAAATGAATTTATTATAGaaata                                                >  2:3946863/1‑126 (MQ=255)
                                                                                         ttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaaaaa                                                <  1:6522932/128‑1 (MQ=255)
                                                                                         ttttttttttttGTAAAAATAAAAGTAAGATTTGGATCAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaaaaa                                                <  2:2412080/128‑1 (MQ=255)
                                                                                          tttttttttttGTAAAAATAAAAGTAAGATTTGGATAAAAAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaaaaaa                                               <  1:458671/128‑1 (MQ=255)
                                                                                           ttttttttttGTAAAAATAAAAGTAATATTTGGATAAAACAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGaaaaaaa                                              <  1:634672/128‑1 (MQ=255)
                                                                                            tttttttttGTAAAAATAAAAGTAAGATTTGGATCAACCAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAAt                                             <  1:6842394/128‑1 (MQ=255)
                                                                                             ttttttttGTAAAAATATAAGTAATATTTGGATAAAATAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTAAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATg                                            <  1:4966773/128‑1 (MQ=255)
                                                                                             ttttttttGTAAAAATAAAATTAAGATTTGGTTCAACAAAAACTATATAAAAAAAAATAAAAAAAATTTTTTTGTTGAGTTTAAAATATGCATATTTTGTAAAAATGAATTTTTGATTTAAAAAAATg                                            >  2:3733666/1‑128 (MQ=255)
                                                                                                  tttGTAAAAATATAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTa                                       <  2:6376611/128‑1 (MQ=255)
                                                                                                     gtttaaaTAAAAGTATGATTTGGATAAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGtt                                    <  1:3847725/124‑1 (MQ=255)
                                                                                                     gTAAAAATAAAAGTAAGATTTGGATCAACAAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGtt                                    <  1:473926/128‑1 (MQ=255)
                                                                                                      tAAAAATAAAAGTAAGATTTTGATCAAAAAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTg                                   <  2:3461392/128‑1 (MQ=255)
                                                                                                       aaaaaTAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTatcaac                                  <  1:788599/128‑6 (MQ=255)
                                                                                                       aaaaaTAAAAGTAAGATTTGGATCAAAAAAATATATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTatcaac                                  <  2:7217225/128‑6 (MQ=255)
                                                                                                        aaaaTAAAAGTAAGATTTGGATCAACCAAAACTATATCATAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTatcaact                                 <  2:1956942/128‑7 (MQ=255)
                                                                                                        aaaaTAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTatcaact                                 <  1:7751672/128‑7 (MQ=255)
                                                                                                        aaaaTAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTatcaact                                 <  1:6417670/128‑7 (MQ=255)
                                                                                                          aaTAAAAGTAAGATTTGGATCAACCATAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATaa                               <  2:5940329/128‑1 (MQ=255)
                                                                                                          aaTAAAAGTAAGATTTGGATCAACCAATACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATaa                               <  2:2087765/128‑1 (MQ=255)
                                                                                                            tAAAATTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATc                             <  2:6925985/128‑1 (MQ=255)
                                                                                                             aaaaGTAAGATTTGGATAAAAAAAAAGTATATAAAAAATATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATcc                            <  2:1494010/128‑1 (MQ=255)
                                                                                                              taaGTAAGATTTTTATCAACCAAAAATATATCAATATAATTAATAAAAATAGTTTAGTTGAGTTTCAAATCTGAATATATAGTACAAATGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCa                           <  2:6636327/127‑1 (MQ=255)
                                                                                                               aaGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAt                          <  1:6615110/128‑1 (MQ=255)
                                                                                                                aGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAtt                         >  2:4883543/1‑128 (MQ=255)
                                                                                                                   attaTTTTGATAAAACAAAAATTTATAAAAAAAATTAATATAAATAGTTTAGTTGAGTTTCAAATCTGAATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAttttt                      <  1:2402845/125‑1 (MQ=255)
                                                                                                                   aaGATTTGTATAAACAAAATATATATAAAAAATATTAAAAAAAATAGTTTAGTTGAGTTTAATATCTGAATATATAGTACAAAGTAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAttttt                      <  2:5363307/128‑1 (MQ=255)
                                                                                                                   aaGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCCttttt                      >  1:5118284/1‑128 (MQ=255)
                                                                                                                   aaGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAttttt                      >  2:912845/1‑128 (MQ=255)
                                                                                                                   aaGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAttttt                      >  1:2170524/1‑128 (MQ=255)
                                                                                                                    aGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATATTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATACAtttttt                     >  2:4060059/1‑128 (MQ=255)
                                                                                                                    aGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCCGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCAtttttt                     >  2:1156415/1‑128 (MQ=255)
                                                                                                                    aGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATATGCATATATAGTACAAAGGAATTTATGATATAAAAAAATGGATTAGTTGATATTCACtttttt                     >  1:4186370/1‑128 (MQ=255)
                                                                                                                     taTTTGGATCAACCAAAAATATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTTCATATATATTAAAAAGTAATTTATTATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTa                    <  2:1308955/127‑1 (MQ=255)
                                                                                                                     gATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTa                    <  1:1271517/128‑1 (MQ=255)
                                                                                                                     gATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATACAAAAAAATAGATGAGTAGATAATCCATTTTTTa                    >  2:3050752/1‑128 (MQ=255)
                                                                                                                      aTTTGGATCAACTAAAACTATATAAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTaa                   <  1:533311/128‑1 (MQ=255)
                                                                                                                      aTTTGGATCAAACAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTaa                   <  1:7487955/128‑1 (MQ=255)
                                                                                                                       tttGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAAt                  >  1:3660257/1‑128 (MQ=255)
                                                                                                                         ttgatataacAATACTATATCAAAAATATTAAAAAAAATAGTTTAGTTGAGTTTCTAATATGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAAtaa                <  2:519891/119‑3 (MQ=255)
                                                                                                                         tGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAAtat                >  2:5550960/1‑126 (MQ=255)
                                                                                                                           gttCAAGCAATACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTTAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTg              <  2:1685449/126‑1 (MQ=255)
                                                                                                                               aaCCAAAAATATATAAAAAAAATTAAAATAAATAGTTTAGTTGAGTTTCAAATCTGAATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTtta          <  2:6205359/128‑1 (MQ=255)
                                                                                                                                aCCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTttat         >  2:5066944/1‑128 (MQ=255)
                                                                                                                                 caaaaaCTATATTAAAAAAATTAAAAAAATTAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAATGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTttatt        <  2:7467245/126‑1 (MQ=255)
                                                                                                                                  cAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGTATTAGTTGATAATCCATTTTTTAATTTTGTtaatta       >  1:7167832/1‑128 (MQ=255)
                                                                                                                                     aaCTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCAATTTTTTAATTTTGTTTATTAAat    >  1:7691242/1‑128 (MQ=255)
                                                                                                                                      aCTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTTTATTAAatt   >  1:2297856/1‑128 (MQ=255)
                                                                                                                                       |                                                                                                                               
TGTAAAAAAGCCTATGTTCTAGGCTTTTTATTATACTTATCAACATTACAACGCTTTCAAAGTGTA‑TTTTTTA‑GG‑CTTG‑‑‑TTTTTTTTTTTTTTTTGTAAAAATAAAAGTAAGATTTGGATCAACCAAAACTATATCAAAAAAATTAAAAAAAATAGTTTAGTTGAGTTTCAAATCTGCATATATAGTACAAAGGAATTTATGATAGAAAAAAATGGATTAGTTGATAATCCATTTTTTAATTTTGTTTATTAAATTA  >  CP016816/203817‑204073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑