Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP016816420,2710GT32.5% 3676.6 / inf 2405intergenic (‑554/+289)JCVSYN2_01895/JCVSYN2_0190030S ribosomal protein S10/tRNA‑Thr
Reads supporting (aligned to +/- strand):  ref base G (491/1079);  new base T (698/59);  total (1266/1139)
Fisher's exact test for biased strand distribution p-value = 0.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 2429 total aligned reads displayed.

TTTTTTAAAAAATTTAAAATTAAAATAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTAAAACAAAAA  >  CP016816/420142‑420398
                                                                                                                                       |                                                                                                                               
       aaaaaTTTTTAATTTTAATAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAATAAAATTTATTttatta                                                                                                                             >  2:7241305/1‑128 (MQ=255)
       aaaaaTTTTTAATTTTAATAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑‑TTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTTATTaaa                                                                                                                           >  2:2263333/1‑128 (MQ=255)
          aaTTTTTAATTTTAATAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTA‑AAAAAAATATAAATTATTTTATTaaaat                                                                                                                         >  2:6713/1‑126 (MQ=255)
          aaTTTTTAATTTTAATAACTGAATTATTTTTCAAATTGTTAAATTAATTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATTAAAct                                                                                                                         >  2:6379770/1‑127 (MQ=255)
            ttttAAATTTAAATAA‑TTTATTTTTTTTTAAATTTTTAAATTTTTTTAAAATAATTATATATTAAAAAA‑‑TTTTA‑‑‑ATCT‑‑TGGTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTatat                                                                                                                    <  2:652369/128‑1 (MQ=255)
             ttttaattttaatAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTTTTTTTTTAAAAGta                                                                                                                       >  2:5746314/11‑128 (MQ=255)
               ttaattttaatAAATTAATTATTTTTAAAATTGTTAAATTTTTTTCAAATAATTATCTATTAATAAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTatat                                                                                                                    <  2:2036019/120‑1 (MQ=255)
                   ttttaatAAATGAATTATTTTTAAAATTTTTAAATTATTTTAAAATAATTATCTATTAATAAA‑‑TTTTA‑TTCTCG‑‑‑‑‑TTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGtt                                                                                                             <  2:3665266/124‑1 (MQ=255)
                     tttatAATTTAATTATTTTTTAAATTTTTAAATTTTTTTTAAAATATTATATTTTAATCAT‑‑TTTTA‑T‑‑T‑G‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTta                                                                                                           <  2:2651375/125‑1 (MQ=255)
                     ttaatAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATTAAACGTATATTTAttt                                                                                                              >  2:6875939/3‑126 (MQ=255)
                       aattaatttatttttTTTAAAATTTTTAAATTTTTTTTAAATAATTTTTTTTTTATTAT‑‑TTTTATTTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGtt                                                                                                             <  2:5184857/119‑1 (MQ=255)
                       aatAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACTTATATTTATGttt                                                                                                            >  2:801143/1‑128 (MQ=255)
                       aatAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATAAAATTTATTTGATTAAAAGTAAATTTATtttt                                                                                                            >  1:152908/1‑128 (MQ=255)
                        taaaatttattattTTTAAAATTTTTAAATTATTTTCAAAAAATTATTTAATAAAAAATTTTTTT‑TTCTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGtt                                                                                                             <  1:5933736/120‑1 (MQ=255)
                        ataattttaatattTTTAAAATTTTTAAATTATTTTCAAATCATTATATATTTATAAA‑‑TTTTA‑TTCT‑G‑‑GTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTtaa                                                                                                          <  1:7681630/118‑1 (MQ=255)
                          aaCTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAAAATTATTTTTTTTATTTAAAGTTTATTTTTTTTtaat                                                                                                         >  1:5327339/1‑128 (MQ=255)
                            attaaTTTTTTTTTAATTTTTTTAATTTTTTTAAAATTATTATATATTAATAAA‑‑TTTTT‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTtaataa                                                                                                       <  2:557545/125‑1 (MQ=255)
                             tGAATTATTTTTCAAATTGTAAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATAAAACTAATATTTATGTTtaataa                                                                                                       >  2:890700/1‑128 (MQ=255)
                              ttattattTTTTAAATTTTTAAATTTTTTTTAAATTATTATTTATTTATAAT‑‑TTTTA‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATaaaa                                                                                                     <  1:4722330/126‑1 (MQ=255)
                                  tattTTTCAAATTGTTAAATTATTTTCAAATCAATATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTTAAAAAAAATATAATTTATATTATTAAACTTAAATTTATTTTAAATAAAAAta                                                                                                  >  1:7209670/1‑127 (MQ=255)
                                  tattTTTCAAATTGTTAAATTATTTTAAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTAT‑‑TTTTTTTTTTTTTTTTA‑ACAAAAATATAATTTATTTAATTAAAAGTATATTTATTTTTAATAAAAATgt                                                                                                 >  2:5388730/1‑127 (MQ=255)
                                   tttttttaattttttaaTTTTTTTTAAAATAATTATTTATTAATTAA‑‑TTTTT‑TGGTTGT‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATgg                                                                                                 <  2:6984723/127‑1 (MQ=255)
                                   attTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTATTTTTTTA‑AAAAAAATATATTTAATTTTTTTAACCGTAATTTTATGTTTTATATAAAtttt                                                                                                >  1:4956926/1‑125 (MQ=255)
                                     ttttttaaTTTTTAATTTATTTTTAAATATTTATTTATTTATAAA‑‑TTTTA‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGaaa                                                                                              <  1:1255390/122‑1 (MQ=255)
                                     ttttCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTTATTTTTTAAAAATAAATTTTTTTTTTATAAAAAttaaaa                                                                                              >  2:3473361/1‑123 (MQ=255)
                                     ttttAAAATTTTTATATTATTTTAAAATTATTATCTATTAATAAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGaa                                                                                               <  2:6124212/128‑1 (MQ=255)
                                         aaaaTTTTTAATTTTTTTTAAATTAATTTTATTTTAATAAA‑‑TTTTA‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAaaagaa                                                                                          <  2:2762921/127‑1 (MQ=255)
                                          aaaTTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTGAATAAAAGAAAATTATTTTTTAATAAAAATTAAaaataaa                                                                                         >  1:6209707/1‑128 (MQ=255)
                                           aaTTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAAAATAATTTATTTTATTAAAAGTATATTTATTTTTAATAAAAATTTaaaaaaaa                                                                                         >  2:2503999/1‑128 (MQ=255)
                                           aaTTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAAAATAAATTATATAAATAAACGTATATTATAGTATAAAAAAAATAGaaaatcaat                                                                                        >  1:3972833/1‑123 (MQ=255)
                                           aaTTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑‑‑TTTTTTTTTTTTTTT‑AAAAAAATATAATTTTTTTGATTAAACGATTATTTTTTTTTAAAAAAAATGGAAAATAAAGtt                                                                                      >  1:7569247/1‑127 (MQ=255)
                                            attttttattttttttTAAATTATTTTTTTTTTATTAA‑‑TTTTT‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGt                                                                                       <  2:3796722/116‑1 (MQ=255)
                                             ttGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTTATTAAACGTATATTTATTTTTAATAAAAATTTAAAATAATGtt                                                                                      >  2:4072016/1‑127 (MQ=255)
                                              ttttAAATTATTTTTAAATTATTATATTTTTATTAA‑‑TTTTA‑TTCTAG‑‑‑‑TTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAAt                                                                                   <  2:7577280/126‑1 (MQ=255)
                                                   aaTTTTTTTTAAATTATTTTATTTTAATAAA‑‑TTTTT‑TTCTAG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGt                                                                                <  1:7329298/128‑1 (MQ=255)
                                                      tattTTCTAATTTTTATTTTTTAATAAA‑‑TTTTA‑TTTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCat                                                                             <  1:6491538/128‑1 (MQ=255)
                                                      tattTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGTAAAATAAAGTGAATTGTAat                                                                             >  2:6279058/1‑128 (MQ=255)
                                                       tttttTAAATTATTATATTTTAATAAA‑‑TTTTT‑TTTTTG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCata                                                                            <  1:7059217/127‑1 (MQ=255)
                                                       attTTAAAATTAATATTAATTAATAAA‑‑TTTTA‑TTCTAT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCata                                                                            <  2:7682338/128‑1 (MQ=255)
                                                         tttCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑‑‑TTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTGATTAAACTTATATTTATTTTTAATAAAAATGGAAAATAATGTGATTTGTCTtaataa                                                                        >  2:6639510/1‑128 (MQ=255)
                                                            aaaaTAATTATATATTAAAAAA‑‑TTTTT‑TGTTTT‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATaataat                                                                       <  1:511215/127‑1 (MQ=255)
                                                                 cATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑‑TTTTTTTTTTTTTTTT‑AAAAAAATATAATATATTTAATTAAAAGTATATTTATATTTAAAAAAAATATAAAAAAAATTAAATATTCATAAtaatataatt                                                                 >  2:4809541/1‑128 (MQ=255)
                                                                     aTCTATTAATCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAATAAAATTTATTTTTTTAAAATTTTATTTATTTTTAATAAAAATGAAAAATAAATTAATTTGTCATAAAAATttaattaa                                                               >  2:4347416/1‑128 (MQ=255)
                                                                       cTATTAATCAA‑‑TTTTA‑TGCTCG‑‑‑TTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTTATTAAACGTATATTTTTTTTTTATAAAAATGTAAAAAAAATTGAATTTTAATAATAATTTAATTAAattt                                                           >  2:4507405/1‑126 (MQ=255)
                                                                        tATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTGATTAAACGTATATTTATTTTTAATAAAAATGTAAAAGAAATTGAATTGAAATAATATTTTAATTAAatat                                                           >  1:7788345/1‑128 (MQ=255)
                                                                          ttAATCAA‑‑TTTTA‑TGCTCGTTTTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATTAACCTTTAATTTTTTTTTAAAAAAATTGTAAAAAAAATTTAATTTTATTAATAATttaattaattta                                                           >  2:3964510/1‑124 (MQ=255)
                                                                           tAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAAAATAATTTTTTTTTTTAAAAGTATTTTTATTTTTAAAAAAAATTTAAAAAAAATTTAATTTTAATATAAATTTAATTAAAtattta                                                        >  1:2019985/1‑128 (MQ=255)
                                                                           tAATCAA‑‑TTTTA‑TGCTCG‑‑‑TTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTTATAAAACGTATATTTATGTTTAATAAAAATGTAAAATAAAGTTAATTTTCATAATAATTTAATTAAAAATATaa                                                       >  1:2854017/1‑128 (MQ=255)
                                                                            aaTCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAAAATAATTTATTTGATTAAACGTATTTTTATTTTTTATAAAAATTTAAAATAAATTTAATTTTAATAAAAATTTAATtatatataaa                                                        >  2:4157773/1‑126 (MQ=255)
                                                                            aaTCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTTAAAAAAAATAAAATATTTTTTATTAAACTTAAATTATTGTTAAAAAAAAATTAAAAATAAATTTAATTTACAAAAATATATAATTAAattaaaa                                                        >  1:4204989/1‑123 (MQ=255)
                                                                            aaTCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATTTAATTTATTTTATTAAAGTTATATTTATTTTAAATAAAAATGTAAAAAAAATTAATTTGTAATAATAATTTAATTAAATATATaa                                                       >  1:3146503/1‑128 (MQ=255)
                                                                              tCAA‑‑TTTTA‑TGCTCGT‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTTTTTTTTTAAACTTTTTTTTTTTTTTAATAAAAATGTAAAAAAAATTAAATTTTAATAATAATTTAATTAAATATATaaa                                                      >  2:4629171/1‑127 (MQ=255)
                                                                              tCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAAATTATTTTATTAAACATATATTTATGTTTAATAAAAATGTAAAAGAAAGTTAATTTTAATAATAATTTAATTAAATATATaaaa                                                     >  1:2538978/1‑126 (MQ=255)
                                                                                    ttttA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATTAAACGTATATTTATTTTTAATAAAAATGTAAAATAAATTAAATTTAAATAATATTTTAATAAAATAAATAaaaaata                                                 >  1:6890011/1‑125 (MQ=255)
                                                                                        ttttttttttttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAAAGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTa                                                <  1:674393/118‑1 (MQ=255)
                                                                                        a‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATAAAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGTAAAATAAATTTAATTGTAATAATAATTTATTTAAATATATAACAATTTAAGt                                             >  2:5051143/1‑128 (MQ=255)
                                                                                          tGCTCG‑‑‑TTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTTATTAAACTTATATTTATGTTTAATAAAAATTTAAAATAAAATAAATTTTAATAATAATTTAATTAAATATATAAAAATTTAAtttt                                           >  1:3784370/1‑128 (MQ=255)
                                                                                            ttttatttttttttttttttttt‑AAAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGtt                                            <  2:7366222/122‑1 (MQ=255)
                                                                                             tttttttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGttt                                           <  2:3097098/123‑1 (MQ=255)
                                                                                             ttg‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  1:6670843/126‑1 (MQ=255)
                                                                                              ttttttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGtttt                                          <  1:1843851/124‑1 (MQ=255)
                                                                                               tttttttttttttttttttt‑ATAAAAATATAATTTATTTGATTAAAATTATATTTATTTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  2:2918983/125‑1 (MQ=255)
                                                                                               tttttttttttttttttttt‑AGAAAAATATAATTTATTTGATTAAAAGTATATTTATTTTTAATAAAAATTGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  1:5802768/125‑1 (MQ=255)
                                                                                               tttttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACTTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  2:1811123/125‑1 (MQ=255)
                                                                                               tttttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  1:4357576/125‑1 (MQ=255)
                                                                                               gctcgttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTa                                         <  2:6784775/123‑1 (MQ=255)
                                                                                               g‑‑TTTTTTTTTTTTTTTTT‑AAAAAAATATAATTTATTTTATTAAACGTATATTTATTTTTAATAAAAATTTAAAATAAATTTAATTTTAATAATAATTTAATTAAATTAATAAAAATTTAA‑TTTTaaaa                                      >  2:1908068/1‑128 (MQ=255)
                                                                                               cgtttttttttttttttttt‑AAAAAATAATAATTTATTTTATTAAACGAATATTTTTTTTTAATAAAAATTAAAAATAAATTTAATTTTAATAATAATTTAATAAAAAATATAACAATTTATTTTTTa                                         >  2:1440887/4‑128 (MQ=255)
                                                                                                  ttttttttttttttttt‑ACAAAAATATATTTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTaaaa                                      <  1:6080043/128‑1 (MQ=255)
                                                                                                  ttttttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTaaaa                                      <  1:6597196/128‑1 (MQ=255)
                                                                                                  gtttttttttttttttt‑AAAAAAATATAATTTATTTTATTAAACGTATATTTATTTTTAATAAAAATGAAAAATAAATTGAATTTTAATAATAATTTAATTAAATATATAACAATTTAATTTTTaaaa                                      >  2:591559/2‑128 (MQ=255)
                                                                                                  gtttttttttttttttt‑AAAAAAATATAATTTATATGAAAAAACATAAAATAATGATTAATAAAAATTAAAAAAAAATTAAATTGTCAAAAAAATTTAATTAAATATAAAAAAATTTAATTTTTaaaa                                      >  2:2390634/2‑128 (MQ=255)
                                                                                                     tttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAactt                                   <  1:6355799/128‑1 (MQ=255)
                                                                                                     tttttttttttttt‑AAAAAAATATAATTTATTTGATTAAAAGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAactt                                   <  1:4498611/128‑1 (MQ=255)
                                                                                                      ttttttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAactta                                  <  2:7456520/128‑1 (MQ=255)
                                                                                                      ttttttttttttt‑AAAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAactta                                  <  2:7760871/128‑1 (MQ=255)
                                                                                                      ttttttttttttt‑AAAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAactta                                  <  1:1720463/128‑1 (MQ=255)
                                                                                                      ttttttttttttt‑A‑TTAATTATTATTTATTTGATTAAATTTATATTTATGTTTAATAAAAATTGAAAAGAAATTTAATTGTAATAATAATTTAATTAAATATATAAAAATGTAATTTTTAAAacttac                                 <  1:2403235/128‑1 (MQ=255)
                                                                                                         tttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGTAAAATAAAGTGAATTGTAATAATAATTTAATTAAATATATAAAAATGTAAGTTTTAAAaattactt                               >  2:1202718/1‑128 (MQ=255)
                                                                                                          ttttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACatt                              <  1:7935314/128‑1 (MQ=255)
                                                                                                          ttttttttt‑AAAAAAATATAATTTATTTTATTAAAAGTATATTTATGTTTAATAAAAATGGAAAAGAAATTTAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACttt                              <  1:1013904/128‑1 (MQ=255)
                                                                                                           tttttttt‑ACTAATATATAATTTATTTGATTAATAGTATATTTATGGTTATTTAAAATGTAAATGTAAGATTATTGTCATTATTATTTAATTAAATATATAACAATGTAAGTATTAAAACTTACtttt                             <  2:5994163/128‑1 (MQ=255)
                                                                                                           tttttttt‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACtttt                             <  1:867066/128‑1 (MQ=255)
                                                                                                           tttttatt‑ATAAAAATATAATTTATTTGATTAAACGTATATTTAAGTTTAATAAAAATTGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACtttt                             <  1:2154576/128‑1 (MQ=255)
                                                                                                            ttttttt‑AAAAATATATAATTTATTTGATTAAAAGTATATTTATGTTTAATAAAAATTTAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACttttt                            <  2:3234198/128‑1 (MQ=255)
                                                                                                                   ttaaataaTATATTTTATTTTATTATAAGTATATTTATGTTTATTAATAATGTAAAAGAAATTTAATTGTCATAATAATTTATTTAAATATATATCAATGTAAGTTTTAAAACTTACTTTTTTGtttt                      <  1:3597122/122‑1 (MQ=255)
                                                                                                                   taaaaaaaTATAATTTATTTGATTAAACGTATATTTATGTTTATTAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGtttt                      <  1:2692537/125‑1 (MQ=255)
                                                                                                                        aaaTTTATTTTTTTTTATTAATTTTTTATTTTTTTTTAATAAAAATTTAAATTAATTTTAATTTTAATAATAATTTAATTAAATTTATAAAATTTTATTTTTTAAAAATTATTTTTTTTTTtttattt                 <  1:41066/128‑1 (MQ=255)
                                                                                                                         aaTATATTTTTTTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTtttattta                <  1:2997343/128‑1 (MQ=255)
                                                                                                                          atatAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTAc               >  2:7114405/1‑128 (MQ=255)
                                                                                                                            ataATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTg             >  1:2287056/1‑128 (MQ=255)
                                                                                                                             taATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGt            <  1:989331/128‑1 (MQ=255)
                                                                                                                              aaTTTATTTGATTATAAGTATATTTATGTTTAATAAAAATTGATAAGAAAGTGAATTGTAATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTa           <  2:7854964/128‑1 (MQ=255)
                                                                                                                              aaTTTATTTGATTAAAAGTATATTTATGTTTAATAAAAATTGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTa           <  2:4251083/128‑1 (MQ=255)
                                                                                                                                  tatttGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGAGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGATTTAAAACTTACTTTTTTGATATTATTAACTATAAAAc       >  1:5508351/1‑128 (MQ=255)
                                                                                                                                    tttGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCataata                                                                         >  2:2180672/1‑60 (MQ=255)
                                                                                                                                    tttGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTAAAACaa     >  1:3368546/1‑128 (MQ=255)
                                                                                                                                      tGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAATTGAATTGTCATAATAATTTAATTAAat                                                             <  1:7478493/70‑1 (MQ=255)
                                                                                                                                      tGATTAAAATTATATTTATTTTTAATAAAAATTGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTAAAACaaaa   <  2:1680186/128‑1 (MQ=255)
                                                                                                                                      tGATTAAAAGTATATTTATGTTTAATAAAAATTGAAAAGAAAGTGAATTGTAATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTAAAACaaaa   <  2:1544445/128‑1 (MQ=255)
                                                                                                                                       |                                                                                                                               
TTTTTTAAAAAATTTAAAATTAAAATAACTGAATTATTTTTCAAATTGTTAAATTATTTTCAAATCATTATCTATTAATCAA‑‑TTTTA‑TGCTCG‑‑TTTTTTTTTTTTTTTTT‑ACAAAAATATAATTTATTTGATTAAACGTATATTTATGTTTAATAAAAATGGAAAAGAAAGTGAATTGTCATAATAATTTAATTAAATATATAACAATGTAAGTTTTAAAACTTACTTTTTTGTTTTTATTTACTGTAAAACAAAAA  >  CP016816/420142‑420398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑