| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | 437881 = | 873 (0.240) | 1047 (0.350) | 136/208 | 28.7 | 61.6% | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | = 437886 | 584 (0.190) | intergenic (‑190/+232) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 1727 total aligned reads displayed.
TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT > CP016816/437759‑438013 | aTTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat > 2:116804/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGTAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑a > 1:7490491/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACATCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑a > 2:7755666/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑a > 2:2601904/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑a > 2:6010111/1‑128 (MQ=255) gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatat < 1:6244565/128‑1 (MQ=255) gTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatat > 2:1990596/1‑128 (MQ=255) tAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatata > 2:4001179/1‑128 (MQ=255) aaGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatat > 2:4183365/1‑128 (MQ=255) ttttAATTTTTAATAAATATTATAAATA‑AAA‑ATTTTATTTATAAAATAAATATTTTATTAAATGACTCAAAGAAAAAACCTATATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatat < 1:665427/127‑1 (MQ=255) gTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTATGAAATTAATCAAAGAAAAAACATCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatat < 2:140276/128‑1 (MQ=255) gTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑taaatatat > 2:3866297/1‑128 (MQ=255) tttCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatata > 1:6100529/1‑128 (MQ=255) tttAATTTTTAATAAATATTATAAATA‑AAA‑ATTTTATTTTTATAATAAATATTTTTGTAAATTAATAACAGCAAAAACCTCCATATTACATATATAGTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑t‑‑tatatat‑‑atatata‑‑‑‑tatatatata < 1:298005/128‑1 (MQ=255) ttCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatat > 1:594220/1‑128 (MQ=255) tattttttAATATATATTAGATATA‑TAA‑TATGTTTTTTTATAATATATATTTTTGGATATTAATCAAATAAAAAATATATATATTACATATATAGTTT‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatata < 1:6762512/125‑1 (MQ=255) tCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatata > 2:7059900/1‑128 (MQ=255) tttttAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatat > 2:3512814/1‑126 (MQ=255) ttattataaataTAAGAAATA‑AAA‑ATTTTATTTATAAAATAAATATTTTTTTAAATGAATAAAATAAAAAAACTCAATATTAACTATAGATTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatata < 1:469725/123‑4 (MQ=255) tttataaaataTTATAAATATAAATATTTTATTTAAAAAAAATATATTTTATTATTTCAAAAACATAAAAAAACTATATATTATATATAGATATT‑‑‑TT‑‑‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGc < 1:4493632/122‑1 (MQ=255) tttAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATGTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatattaatataagc > 1:4132087/1‑124 (MQ=255) tttAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatatat > 2:1069080/1‑124 (MQ=255) tttAATAAATATAATATATA‑AAA‑ATTTTATTTTTATAATAAATATTTTATTTAATTAATAAAATAAAAAAACACAATATAATATATAGAGATA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatatat < 1:1938456/128‑5 (MQ=255) ttAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatattta > 1:917493/1‑123 (MQ=255) aataaataTTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAGCTCAATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatttatatatattagaaag > 1:6519709/1‑121 (MQ=255) aataaataTTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatataagaa > 1:129374/1‑121 (MQ=255) taaataTTATATATA‑AAA‑ATAGTATTTTTAAAATAAATATTTTATGAAAAAAATCAAAGAAAAAACATCAATATAATATATAGAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatatatgcaag < 2:3125024/128‑10 (MQ=255) atatatTATAAATA‑AAA‑ATTTTATATTTAAAATAAATATTTTATGATATTAATCAAAGAAAAAACCTCCATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGa < 1:3729961/126‑1 (MQ=255) aataTTAGATATA‑AAA‑ATTTTATTTTTTAAATAAATATATTAGTAAATGAAGAAAATAAAAAAACTCTATATTAAATATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatcattaactcta < 1:227379/128‑12 (MQ=19) atatTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatatatatactaaa > 1:3296607/1‑116 (MQ=255) atatAAAAAAAA‑AAA‑AATGTATTTTTAAAAAAAATATATTATTAAAACAAACAAAAAAAAAAACACAATATAAACTATATAGAAA‑‑‑AA‑‑‑‑C‑‑‑‑‑‑a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatatatatatatat < 2:5824526/128‑13 (MQ=255) aGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCACCAt < 2:7437096/128‑1 (MQ=255) aaaTA‑AAA‑ATTTTATATTTAAAATAAATATATTATTAAATCAATCAAATCAAAAAAATCAATATTAAATATAGAGTTATAGATA‑‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCAt < 1:2054786/128‑1 (MQ=255) aaaTA‑AAA‑ATTGTAGTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATATACATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATaa < 2:2342454/128‑1 (MQ=255) aaTA‑AAA‑ATTTTATTTTTAAAATAAATATTTTATCAAATTAATCAAATAAAAAACCTCCATATTACCTATAGAGATA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATa < 2:3339100/128‑1 (MQ=255) aaTA‑AAA‑ATTGTATTTTTAAAATAAATATTTTATGAAAAGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATaaa < 2:635004/128‑1 (MQ=255) aaTA‑AAA‑ATTGTATTTTTAAAATAAATA‑TTTAGTAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATaa < 2:6872609/128‑1 (MQ=255) ata‑ata‑ATTGTTTTTTTAAAATAAATATTTTAGGATATGAAGATAATCAAAAACCTCTATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATaa < 1:4042350/128‑1 (MQ=255) ttGTATTTATAATATAAATATTTTATGATATGAAGAAAATCTAAAAAAACTATATAAAATATAGAGTTT‑‑‑TT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATATATTTATATATATATATGCAAGCGATCAGCATAAAATGGTg < 1:4312448/128‑1 (MQ=255) ttGTATTTATAAAATAAATATTTTAGTTAATGAATAAAAGAAAAAAAATCCATATTAACTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTg < 2:4671905/128‑1 (MQ=255) ttataTTTAAAATAAATATTATATTATATTAAGAAAATCAAAAACATACATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATATATA‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTg < 2:2916240/127‑1 (MQ=255) ttATTTTTAAAATAAATATTTTATTAAATTAATCATAGAAAAATCCTCCATATTACCTATAGAGTTT‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGaa < 1:4790444/127‑1 (MQ=255) ttATTTTTAAAATAAATATTTTATGTAATGAATCAAATAAAAAACCTACATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt < 1:2804592/127‑1 (MQ=255) tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCGATCAGCATAAAAttttgtaa > 2:5098669/1‑121 (MQ=255) aTTTTTTAAATAAATATTTTATTTAATTAATAAAATCAAAAACCTCAATATAACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAttt < 1:5863374/128‑1 (MQ=255) aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCGATCATCATAAAATGTTGAAAt > 2:4335863/1‑128 (MQ=255) ttAAAATAATTATTTTAGTAAATGAAGAAAAGCAAAAACATCTATATAAACAATAGAGATA‑‑‑AA‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg < 1:2667404/128‑1 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAACCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAATTATAGa > 2:7304292/1‑128 (MQ=255) tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGCTCAGCAAAAAATGGAGAAATTTata > 1:5001009/1‑126 (MQ=255) aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt > 2:1768692/1‑128 (MQ=255) aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCTATCATCATAAAATTTTGATATTTATATCTGAg > 2:5238579/1‑128 (MQ=255) aataTTTTAGTAAATGAAGCAAAGAAAAAACATCAATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt < 1:3866297/128‑1 (MQ=255) tatTTTATTAATTGAATAAAATAAAAAACATACATATTATATATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTg < 2:6230934/128‑1 (MQ=255) atTTTATGAAATTAATACAATCAAAAAACTAAATATTTAATATATAGTTA‑‑‑TT‑‑‑‑G‑‑‑‑‑‑ATTTATATAT‑‑ATATTTA‑‑‑‑TATTTATATATATGAATGCGATCAGCATAATATGTGGAAATTTAGATCTGAGTTGGTc < 1:7002673/128‑1 (MQ=255) ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGATTTgtt > 2:2799479/1‑126 (MQ=255) tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCTATCAAAAAAAAATGGTTAAATTTATATATGAGTTTGTCtt > 1:1788914/1‑128 (MQ=255) ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATA‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATTAAAGAGATCAGCAAAAAATTGTGAAATATATATCTGAGtttct > 2:6511255/1‑125 (MQ=255) taaagAAGCAAAGAAAAAAACTCAATATTAACTATAGAGATA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt < 1:5270302/124‑1 (MQ=255) taaaatcaaaAACATCAATATAACCTATAGAGTTT‑‑‑AT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttttt < 1:5725472/126‑1 (MQ=255) aaatcaaaAAACTCAATATTACCTATAGATTTA‑‑‑TA‑‑‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat < 2:6605182/128‑1 (MQ=255) caaaAAACTCCATATAAACTATAGATTTA‑‑‑TTTA‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt < 1:7874199/128‑1 (MQ=255) aaaaaaCTCCATATTACCTATAGAGATT‑‑‑AT‑‑‑‑GATATATA‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta < 2:2700692/128‑1 (MQ=255) aaaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCGATCAGTATAAAATGGTGAAATTTATATCTGATTTTGTCTAATATATTTAGTTtatattt > 1:7767126/1‑128 (MQ=255) aaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCATCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTATTTTttttttat > 1:253178/1‑128 (MQ=255) aaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat > 2:373271/1‑128 (MQ=255) cTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGATATCAGAATAAAATTGAGATATTTAGATATGATTTTTTATTTAATTTATATTATTTATTtatattat > 2:5642922/1‑124 (MQ=255) aaatatTACCTATAGAGTTA‑‑‑TT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:5489289/126‑1 (MQ=255) aaatatTAAATATAGAGATA‑‑‑ATTA‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:7863429/126‑1 (MQ=255) cATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATA‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGtt > 1:541205/1‑128 (MQ=255) cATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta > 2:4801369/1‑128 (MQ=255) atatTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGtt > 1:5598763/1‑128 (MQ=255) tatTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaaa < 2:2440772/128‑1 (MQ=255) ttACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAATAGATCAGAAAAAAATGTAGATATTTATATCTGAGTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATaaa > 1:514003/1‑128 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGCTCAGCATAAAATGGTGAAATTTATATATGAGTTGGTCTTATATTTGTAGTTTTTATATATAGTTTATAAAGtt > 2:572813/1‑128 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGCGCTCAGCATAAAAGGGTGAAATATAGATCTGAGGTGGTCTTATATTTGTAGTGTTTATTTATAGTTTATAAAggt > 1:1461185/1‑126 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGAAAGAGATCAGAAAAAAATTGTTAATTTTATATCTGAGTTTGTCTGTTATTTTTAGTTTTTTTTTATAGTTTATAAATTtaa > 2:4942101/1‑128 (MQ=255) aaaatatataGATT‑‑‑AT‑‑‑‑T‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa < 1:1109000/124‑1 (MQ=255) aatgatatatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGAAAGCGATAAGAATAAAATTGTGAAATATATATCTGAGTTGTTATTATATTTTTATTTTTTATTTATAGTTTATAAATTTAATAAtt > 2:867220/13‑128 (MQ=21) tttaatgatata‑‑tatttat‑‑atatata‑‑‑‑tatatatatttatGCAAGCGATCAGCATAAAATGGTGTAATTTAGATATGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt < 2:1925124/117‑1 (MQ=38) taatgatatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCTAGAGATCAGAATAAAATTGTGAAATTTATATATGAGTTTGTCTTAAATTTGTAGTTTTTATTTATTGTTTATAAAGTTATTAAttt > 2:1267775/12‑128 (MQ=25) gttaatgatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATTGTTAAATTTATATCTGAGTTTGTATTAAATTTTTAGTTTTTATTTATATTTTATAAATTTAATAAttt > 1:6420797/12‑128 (MQ=25) gttaatgatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGAAAGCGATCAGAAAAAAATTGTGATATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt > 2:7595279/12‑128 (MQ=25) aatgatatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatTAAAGATATCATAATAAAATATTGAAATTTATATCTGAGTTTGTATTAAATTTGTATTTTTTTTTTATATTTTATATATTTAATAATTTa > 1:1624651/11‑128 (MQ=16) tatatata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt < 2:537149/121‑1 (MQ=255) tgata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtttt < 2:3018628/124‑1 (MQ=255) atata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAACATAAAATGGTGAAATTTATATATGAGTTTGTCTTAAATATGTATTTTTTATTTATAGTTTATATAGTTAATAATTTAGAtttt > 2:6723702/5‑128 (MQ=255) atcgcttgcatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt > 2:158965/10‑128 (MQ=255) ata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCTCTCAGCATAAAATGGTTAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAATTTAATATTATATATTTTTa > 1:712196/3‑128 (MQ=255) ata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa > 2:451890/3‑128 (MQ=255) ata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAACAAAAAATTGTTATATTTATATCTGAGTTGTTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATATATATTTTTa > 1:7375327/3‑128 (MQ=255) ata‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGAAAGCGATCAAAATAAAATTGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATTTATATTTTTa > 1:7612105/3‑128 (MQ=255) ta‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTAGATTTTTat > 1:3575917/2‑127 (MQ=255) ta‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATAATATAGAtttttta > 2:6113356/2‑126 (MQ=255) ta‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGAAAGCGATCAGCATAAAATGGTGATATATAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTATATTTTTaa > 1:3128049/2‑128 (MQ=255) a‑‑tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat < 2:218303/128‑1 (MQ=255) cttgcatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa > 1:6864263/6‑128 (MQ=255) tatatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTTATTTATAGTTTATATAGTTTATAATTTAGATTTTTAata > 2:3642086/1‑128 (MQ=255) atatat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAatat < 1:2390051/128‑1 (MQ=255) atat‑‑atatata‑‑‑‑tatatatatatatGCAAGCTATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAATATAGATTTTTAATAttt > 1:3472611/1‑128 (MQ=255) atat‑‑atatata‑‑‑‑tatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATATATATTTTATAAAGTTAATAATATAGATTTTTAATAttt > 1:1006428/1‑128 (MQ=255) | TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATA‑AAA‑ATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑A‑‑TATATAT‑‑ATATATA‑‑‑‑TATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTTT > CP016816/437759‑438013 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |