| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 401 (0.140) | 1014 (0.290) +ATATAT |
120/184 | 27.8 | 65.3% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 618 (0.170) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 1716 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT > CP016816/437754‑438008 | gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a > 1:3894967/1‑128 (MQ=255)gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑a > 2:1592511/1‑128 (MQ=255) aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑at > 2:1275813/1‑128 (MQ=255) aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atat > 1:3743626/1‑128 (MQ=255) aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atat > 1:2809508/1‑128 (MQ=255) cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atata > 2:2140858/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACATCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata > 2:7755666/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata > 2:6010111/1‑128 (MQ=255) tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatata > 2:1732806/1‑128 (MQ=255) gTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tat > 1:496567/1‑128 (MQ=255) ttGTAAGATTCATATTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatat < 2:399506/128‑1 (MQ=255) gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatat > 1:6864466/1‑128 (MQ=255) ttattttattttttAATAAATATTAGAAATAAATATTTTATTTTTAAAATAAATATTTTATTAAATCAAGAAAAGCAAAAAAATCCATATTATCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatata < 1:4689943/119‑1 (MQ=255) aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑aataaattaat > 1:1944179/1‑124 (MQ=255) aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatat > 2:4183365/1‑128 (MQ=255) gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatataaatatat > 2:3866297/1‑128 (MQ=255) tttAATTTTTAATAAATATTATAAATAAAAATTTTATTTTTATAATAAATATTTTTGTAAATTAATAACAGCAAAAACCTCCATATTACATATATAGTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑ttatatatata‑‑‑‑tatatatatatata < 1:298005/128‑1 (MQ=255) tcttttttAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATAAAAGCAAAAACCTCAATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatata < 2:4327167/125‑1 (MQ=255) cATTTTTATTATATATTATAAATAAAAATTGTATATTTAAAATAAATATTTTATGAAAATACCCAAAGCAAAAACCTCAATATAACCTATAGAGATA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatat < 2:2381936/128‑1 (MQ=255) cATTTTTAATAAATATTATAAATAAAAATTGTATATATAAAATAAATATATTAGTAAATGAACCAAATCAAAAACCACCATATTAACTATAGAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatat < 2:7062073/128‑1 (MQ=255) tttttAAAAAATATTAGAAATATAAAATGTATTTTTATAATAAAAATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatat < 1:5850314/128‑3 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgc > 2:364112/1‑124 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgc > 2:7634081/1‑124 (MQ=255) tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatat > 2:1069080/1‑124 (MQ=255) ttAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATAAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatg < 2:3726171/128‑6 (MQ=255) ttataaataTTAGAAATAAAAATTGTTTTTTTAAAATAAATATTTTATTAAATGAAGCAAAGCAAAAAAATCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatat < 1:539686/126‑7 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatattatag > 1:4776911/1‑121 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatataaa > 2:1384738/1‑121 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatatt‑‑‑‑tatatatatatatatatatatgaa > 1:5555140/1‑121 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatattctag > 2:2554821/1‑121 (MQ=255) aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatataaaat > 1:3295889/1‑121 (MQ=255) taaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTCAATGAATCAAAGCAAAAAAATCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGAt < 2:1974700/128‑1 (MQ=255) aaataTTAGAAATAAAAATTGTATTTTTAAAATAAAAATTTTATTATATGAAGAAAATCAAAAACCACCATATTACCTATAGAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatgcaagc < 2:6909561/128‑11 (MQ=255) aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatgcaagatat > 1:1528776/1‑117 (MQ=255) atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatataatatc > 2:6242862/1‑116 (MQ=255) atatAAAAAAAAAAAAATGTATTTTTAAAAAAAATATATTATTAAAACAAACAAAAAAAAAAACACAATATAAACTATATAGAAA‑‑‑AA‑‑‑‑C‑‑‑‑‑‑atatatatata‑‑‑‑tatatatatatatatatatatatatatat < 2:5824526/128‑13 (MQ=255) ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGc > 2:3130172/1‑128 (MQ=255) taaaaaaaaATTTTATTTTTAAAAAATATATTTTTTTAAAATAATAAAATAAAAAACATCTATATAATATATATAGATA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCa < 2:864429/127‑1 (MQ=255) taaaTAAAAATTTTATTTATAAAAAAAATATTTTATCAAATAAACAAAAACAAAAAACACAATATTAACTATAGAGATA‑‑‑AT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAAt < 2:3047577/127‑1 (MQ=255) aaaTAAAAATTTTATTTTTATAAAAAATATTTTATGAAATTACTATAATCAAAAAAATCTATATTATCTATATAGATA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa < 1:664389/128‑1 (MQ=255) aaaTAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaa < 2:3504755/128‑1 (MQ=255) aaTAAAAATTTTATTTTTAAAATAAATATTTTATCAAATTAATCAAATAAAAAACCTCCATATTACCTATAGAGATA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATa < 2:3339100/128‑1 (MQ=255) ataataATTGTTTTTTTAAAATAAATATTTTAGGATATGAAGATAATCAAAAACCTCTATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaa < 1:4042350/128‑1 (MQ=255) tAAAAATTGTATTTTTAAAATAAATATTTTATTATATTAATCAAAGAAAAAAAATCCATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaa < 1:2553681/128‑1 (MQ=255) aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATGAGCATaaaa > 1:2712636/1‑128 (MQ=255) aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATCAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTA‑‑‑AA‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATaaaa < 2:6610521/128‑1 (MQ=255) aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCTAGCGATCAGCATAAAATGGTGa > 1:1314440/1‑128 (MQ=255) aaTTGTATTTTTTAAATAAATATATTATTAAATTAATCAAATCAAAAAACTACATATTACATATAGAGTTA‑‑‑TTTA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg < 1:5121542/128‑1 (MQ=255) ttGTATTTATAAAATAAATATTTTAGTTAATGAATAAAAGAAAAAAAATCCATATTAACTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg < 2:4671905/128‑1 (MQ=255) ttataTTTAAAATAAATATTATATTATATTAAGAAAATCAAAAACATACATATTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTg < 2:2916240/127‑1 (MQ=255) tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AC‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGata > 2:2792622/1‑126 (MQ=255) aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAAACTCCATATAACATATAGAGATA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAAt < 1:6751911/128‑1 (MQ=255) aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGCATAAAATTGTTAAAt > 2:6391643/1‑128 (MQ=255) ttttAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTAAATATTATCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt < 1:6094371/128‑1 (MQ=255) aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATATGAGt > 1:5702660/1‑128 (MQ=255) taaataTTTTAGTAAATGAATCAAATCAAAAAACTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa < 2:6524203/128‑1 (MQ=255) taaataTTTTAGGAAATTAATCAAACAAAAAACCACCATATTACATATAGAGTTA‑‑‑AA‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt < 1:5258506/128‑1 (MQ=255) aaataTTTTATTAAATTAATAAAAGAAAAAACATCCATATTACCTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:113005/128‑1 (MQ=255) atatTTTATTATATGAAGCAAATCAAAAAAATCCATATTAAATATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt < 1:7008194/128‑1 (MQ=255) tattataTGAAGAAAATCAAAAAACTCTATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTc < 2:1174328/122‑1 (MQ=255) aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCTATCAGCATAAAATGGTGAAATTTATATCTTAGTTTGTGTTAAAttt > 1:1645179/1‑128 (MQ=255) agcaaagcaaAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCTATCAGAATAAAATTGTGAAATTTATATCTGATTTTGTATAAAAttttttg > 1:4309208/1‑124 (MQ=255) taaaagaaaaAACCTCAATATTATCTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt < 1:6391643/126‑1 (MQ=255) aaagcaaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATATAAGCAAGAGATAATAATAAAATAGATATATTTAGATCAGAGTTTTTATTAAAttattattttat > 2:4947083/1‑118 (MQ=255) gcaaaAACCTCAATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt < 2:2280221/128‑1 (MQ=255) gaaaaaaCCTCTATAATAGCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATTTATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta < 2:5237708/126‑1 (MQ=255) caaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAATCTATCAGAATAATATTGTGAATTATAGATCTGAGTTGGTATTAAATTTATATTTtttat > 1:2413040/1‑128 (MQ=255) caaaAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGCATAAAATAGAGATATATATATCTGATTTGGTCTATAATATTTATTTtttatat > 1:922856/1‑126 (MQ=255) aaaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCATCAAAAAATGGTGAATTATAGATCTGAGTTGCTCTTAAATATTTAGTTtttattt > 1:7165399/1‑128 (MQ=255) aaaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGTATAAAATGGTGAAATTTATATCTGATTTTGTCTAATATATTTAGTTtatattt > 1:7767126/1‑128 (MQ=255) aaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCTAGCGATCAGAATAATATTGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTTGTTtttattta > 1:1014028/1‑128 (MQ=255) aaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGCTCAACATAAAATTGTGAAATTTAGATCTGAGTTGTTCTTATATTTGTAGTTTttatttat > 2:4517639/1‑128 (MQ=255) accaccATATTAACTATAGAGTTAAATATA‑‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata < 1:4480105/128‑1 (MQ=255) aCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATATA‑‑‑‑TATATATATATATATAT‑‑AAAAGCTATCATAATAAAATTGTGAAATATATATCTGAGTTTGTATTATATTTTTAGTTtttattta > 2:6743489/1‑128 (MQ=255) acTCAATAATACCTATATAGTTA‑‑‑TT‑‑‑‑‑‑‑‑‑‑‑‑TATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata < 1:2291286/127‑1 (MQ=255) cTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGATATCAGAATAAAATTGAGATATTTAGATATGATTTTTTATTTAATTTATATTATTTATTtatattat > 2:5642922/1‑124 (MQ=255) ccATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa > 2:2700170/1‑128 (MQ=255) aaatatTAAATATAGAGATA‑‑‑ATTA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat < 2:7863429/126‑1 (MQ=255) cATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTta > 2:4801369/1‑128 (MQ=255) aatatTAACTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata < 1:2095395/127‑1 (MQ=255) tatTAACTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTCTATTTATAGTTtata < 2:7326726/128‑1 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑TCAAGCTATCAGCATAAAATGGTGAAATATAGATCTGAGTTTGTCTAAAATTTCTAGTTTATATTTATATTTTATAAAg > 1:7875239/1‑128 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTATATATGAGTTGGTCTTATATTTGTAGTTTTTATATATAGTTTATAAAGtt > 2:572813/1‑128 (MQ=255) ccTATAGAGTTA‑‑‑AT‑‑‑‑GATAT‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑CCAAGAGAAGAGCATAAAATGGTGAATTTTAGATCTGAGTTTGTTATAATTTTCTATTTTTTTTTtatatgttttaatttt > 1:6201568/1‑116 (MQ=255) atatattaa‑‑‑aT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAtt < 1:4138791/120‑1 (MQ=255) ataGAGTTA‑‑‑ATCA‑‑T‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaatta < 2:5096629/128‑3 (MQ=255) agagTTA‑‑‑AT‑‑‑‑GAT‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GAAAGCGATCAGAAAAAAATGGTGAATTTTATATGTGAGTTGTTGTTTATTATGTAGTTTTTATTTATTGTTTATTAAGATTATAttt > 2:547022/1‑128 (MQ=255) gttaatgatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGTTAATAAttt > 1:1824500/12‑128 (MQ=38) atttatatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa < 1:7491202/118‑1 (MQ=255) taatgatatatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTTGTATTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTat > 2:7447587/10‑127 (MQ=37) tatatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt < 2:537149/121‑1 (MQ=255) tatatatatatatata‑‑‑‑tatatatatatatatat‑‑TCAAGCGATCAGCATAAAATTGTGATATATATATGTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATATTTTATAAATTTATTAATTTATAttt > 1:3473718/6‑128 (MQ=255) tatatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGAGATCAGCATAAAATGGTGTAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt < 1:6511255/123‑1 (MQ=255) atgatatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt > 2:1911198/6‑128 (MQ=255) atatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAACAAAAAATTGTTATATTTATATCTGAGTTGTTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATATATATTTTTa > 1:7375327/3‑128 (MQ=255) atatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAAAATAAAATTGTGAAATTTATATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATAGTTTATATATTTAATAATTTATATTTTTa > 1:7612105/3‑128 (MQ=255) tatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTAGATTTTTat > 1:3575917/2‑127 (MQ=255) tatatatatata‑‑‑‑tatatatatatatatat‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATAATATAGAtttttta > 2:6113356/2‑126 (MQ=255) tatatatatata‑‑‑‑tatatatatatatatat‑‑GAAAGCGATCAGCATAAAATGGTGATATATAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTATATTTTTaa > 1:3128049/2‑128 (MQ=255) tatatatatata‑‑‑‑tatatatatatatataa‑‑GCAAGCGATCAGCAAAATATGGAGATATTTATATGATAGTTGGTATTAATTTTTTTGTTTTTTTTTATATTTTATATATTTTATATTTTATTTTTTTaa > 1:5925610/2‑128 (MQ=255) | GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATA‑‑‑‑TATATATATATATATAT‑‑GCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAAT > CP016816/437754‑438008 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |