New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 165253 =2471 (0.680)365 (0.110) 125/220 36.6 14.8% intergenic (+217/‑325) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 = 165249 2029 (0.640)intergenic (+213/‑329) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2617 total aligned reads displayed.

GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAA  >  CP016816/165122‑165375
                                                                                                                                 |                                                                                                                                  
    atatatAGTTTCATTAATTTATAGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATATTTTTAGA‑TATTTTTTGTATATGAAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tatt                                                                                                                               >  2:7798796/1‑128 (MQ=255)
    atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑tttt                                                                                                                               >  1:1349394/1‑128 (MQ=255)
    atatTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTATATAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tatt                                                                                                                               >  2:6341062/1‑128 (MQ=255)
         tAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttt                                                                                                                          >  2:422849/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttatt                                                                                                                        >  2:2921661/1‑128 (MQ=255)
           gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAAATAAAACTATTATCTTTTTATA‑TATTTTTTTTATATTCAAA‑ATTTTAAAAAATAAATTATAACTATTAAAAAATAGA‑ttttatatttt                                                                                                                        >  2:315345/1‑128 (MQ=255)
            tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttt                                                                                                                       >  1:7727775/1‑128 (MQ=255)
               cATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttt                                                                                                                    >  2:2380945/1‑128 (MQ=255)
                  tAATTTATCTCCCTTTTTTTAATTTTTAATAAAAAAAAAAAATTATTTTTTTTTA‑TATTTTTTTTTTATTTAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAAAATC‑tttttttttttttttttt                                                                                                                 <  1:532596/128‑1 (MQ=255)
                     tttATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTtataa                                                                                                              >  1:6175611/1‑127 (MQ=255)
                      ttATCGCACTTTTATTAATTATTAAGAAACTAAAACTATTATCTTTTTATA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTTAACTTTTAAAAAATAGC‑ttttttttttttttttataatg                                                                                                             <  2:5609065/128‑7 (MQ=255)
                         tataaattttattaattattaatAAAATAAAAAAATTAAATTTTTATA‑TATTTTTTTTATATTCAAA‑TTTTTAAAAAAATAATTTGAACATTTAAAAAAAAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATgg                                                                                                        <  2:2778345/119‑1 (MQ=255)
                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTatattgtaa                                                                                                         >  1:1831697/1‑123 (MQ=255)
                          cGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTttt‑atttt                                                                                                        >  1:2358058/1‑124 (MQ=255)
                            cACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttttaaattgtaaat                                                                                                       >  2:5470887/1‑117 (MQ=255)
                              cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAata                                                                                                   >  1:6393689/1‑128 (MQ=255)
                               ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAatat                                                                                                  >  1:6545680/1‑128 (MQ=255)
                                tttatttaattgTAAGAAACTAAAAATATTTTATTTTTTTT‑TTTTTTTTTTATATTAAAA‑TTTTTAAAAAAATAATTTTAAATTTTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAatat                                                                                                  <  2:757466/117‑1 (MQ=255)
                                  ttttaaTTATTAATAAAATAAAAATATTTTATTTTTTTT‑TATTTTTTTTTTATTAAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATaa                                                                                                <  1:6832194/124‑1 (MQ=255)
                                  tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATTTAAATATaaa                                                                                               >  2:1169098/1‑128 (MQ=255)
                                   attaaTTAGTAATAAAATAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATTCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTATTTTTTTTTTTAT‑AATGGAAATATAAAtt                                                                                             <  2:3833856/125‑1 (MQ=255)
                                   aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATTTAAATATAAAt                                                                                              >  1:7488826/1‑128 (MQ=255)
                                   aTGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAA‑ATTTTAAATATAAAt                                                                                              >  2:1726845/1‑128 (MQ=255)
                                    ttaaTTATTAATAAAATAAAAATATTATCTTTTTATA‑AATTTTTTTTATATTAAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAAtt                                                                                             <  2:4790354/126‑1 (MQ=255)
                                    ttaaTTAGTAATATACTAAAAATTTTATATTTTTTGA‑TTTTTTTTGTTTATTGTAA‑TTTTTAAAAAATTAATTTTTAAATTTAAAAAATATC‑‑GTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAAtt                                                                                             <  2:1362056/126‑1 (MQ=255)
                                       aTTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAAATATAAATTTTa                                                                                          >  2:4079644/1‑128 (MQ=255)
                                        ttattaATAAAATAAAACATTTATTTTTTTATA‑TATTTTTTGTTTTTTCAAA‑ATTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGt                                                                                       <  2:222156/128‑1 (MQ=255)
                                         tAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAA‑AATTTAAATATAAATTTTattta                                                                                      >  1:3844100/1‑124 (MQ=255)
                                          aGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATATGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAA‑AAAGTAAATATAAATTTTatg                                                                                        >  1:1003399/1‑126 (MQ=255)
                                           tttataaaataaaaataTTTTTTTTTTATA‑TTTTTTTTTTTTTTTTAAA‑TTTTTTAAAAATTTATTTTTAATTTTTAAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTa                                                                                      <  1:5890284/123‑1 (MQ=255)
                                            atgattgataaaaataTTTTTTTTTTATT‑TTTTTTTTTTTAATTAAAA‑TTTTTAAAAAATTAATTTTTATTTTTAAAAAAT‑TT‑ATTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑t                                                                                    <  1:5716688/120‑1 (MQ=255)
                                               gAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTATA‑AATTAAAATAAATATTTTattta‑ttt                                                                                  >  1:4546225/1‑128 (MQ=255)
                                                caaataaaaataTTATCTTTTTTTATTTTTTTTTTTATTTGAAAA‑TTTTAAAAAAATTATTTTAAATTTTTAAAAAA‑ATC‑‑GTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTttg                                                                                <  2:6991217/124‑1 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑‑AATTTAAATATAAATTTTAGGTA‑ttttt                                                                                >  2:7479696/1‑127 (MQ=255)
                                                aaactaaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TATTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAA‑AATGTAAATATAAAtttatttttttttt                                                                                 >  1:2186524/1‑117 (MQ=255)
                                                  actaaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAT‑AATTTAAATATAAATTTTATTTA‑TTttgtttt                                                                            >  2:1966313/1‑126 (MQ=255)
                                                  aatataatttttatCTTTTTTTT‑TATTTTTTGTTTATTCAAA‑TTTTTAAAAAATTAATTTTAAATTTTTAAAATTTTC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTttgtt                                                                              <  2:5765163/118‑1 (MQ=255)
                                                   ctaaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAAATTTAAATTTTAGGTA‑Tttttttt                                                                             >  1:7186854/1‑127 (MQ=255)
                                                   attaaaataTTTTTTTTTTAGT‑TATTTTTTTTATATTCAAA‑TTTTTAAAAAATTAATTTTAACTTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTttgttg                                                                             <  1:1728840/125‑1 (MQ=255)
                                                    taaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATGTAAAATTAAATTTTATGTt‑ttttttttt                                                                            >  1:7613891/1‑126 (MQ=255)
                                                     aaaactaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAATTATAAATTTTAGTTT‑TTTtgttgta                                                                           >  1:5997677/1‑127 (MQ=255)
                                                      aaacatttaattttttAGA‑TTTTTTTTGTTTATTCAAA‑TTTTTTAAAAATTAATTTTAACTTGTAAAAAA‑AAC‑CTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCt                                                                          <  1:2678776/117‑1 (MQ=255)
                                                       aaatattatTTTTTTATA‑TATTTTTTTTTTATTCAAA‑TTTTTAAAAAATTAATTTTAACATTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTa                                                                         <  2:5926322/125‑1 (MQ=255)
                                                        aaaatattttttttATT‑TATTTTTTTTATTTGAAAA‑ATTTTAAAAAATAAATTTTAAATTG‑AAAAAAT‑TC‑GTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAg                                                                       <  1:4100077/119‑1 (MQ=255)
                                                         ctaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATTTAAATATAAATTTTATTTA‑TTTTTTTTTATaat                                                                       >  1:2017243/1‑127 (MQ=255)
                                                         ctaTTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTGTTTTTTTTTTTTTAT‑AATGTAAAAATAAATTTTTGGTT‑TTtttttgaagaag                                                                       >  1:299135/1‑122 (MQ=255)
                                                         atattttTTTTTTATA‑TATTTTTTTTTTTTTTAAA‑TTTTTAAAAAATTTATTTTAAATTTTTAAAAA‑‑‑‑‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTAt                                                                    <  1:1183515/127‑1 (MQ=255)
                                                          tattatCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑AATTGAAATAAAAATTTAATGTA‑TTTTTTTTTATAATTa                                                                     >  1:7342787/1‑128 (MQ=255)
                                                            ttatCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑AATTTAAATATAAATTTTATTTA‑TTTTTTTTTATAATTAt                                                                    >  2:3596827/1‑128 (MQ=255)
                                                             tatCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATTTAAAAATAAATTTTTGTTT‑TTTTTTTGTATAATTAta                                                                   >  1:3355215/1‑127 (MQ=255)
                                                              atCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAT‑AATTTAAATAAAAATTTTATTTA‑Tttttttttatatttat                                                                    >  2:5358222/1‑118 (MQ=255)
                                                              atCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑AATTTAAATATAAAATTTTTTTA‑TTTTTTTGTATAATTaaata                                                                 >  1:3965928/1‑124 (MQ=255)
                                                                cTTTTTATA‑TTTTTTTTTTTTATGCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTaaaaa                                                             <  1:2846780/128‑1 (MQ=255)
                                                                cTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTAAT‑‑ATTTAAATATAAATTTTAGTTA‑TTTATTTTTCTAATTATATaa                                                                >  2:3699024/1‑128 (MQ=255)
                                                                     ttta‑tatTTTTTGATTATTATAA‑TTTTTAAAAATTTAATTTTATATTGTTATAAA‑ATG‑GTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTaaaaaaa                                                           <  2:6710811/125‑1 (MQ=255)
                                                                      aGA‑TATTTTTTGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAA‑AATTAAAATATAAATTTTATTTA‑TTTTTTTTTATAAGTATAAAAAAAAAt                                                          >  1:4353510/1‑128 (MQ=255)
                                                                       tgtttttttttttttATGCAAA‑TTTTTAAAAAATTAATTTGAACTTTTTAAAAATAGC‑TTTTTTTTTTTTTTTATTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTaaaaaaa                                                           <  2:5199719/123‑1 (MQ=255)
                                                                        a‑tatTTTTTTTATATTCAAA‑TTTTTAAAAAATTAATTTTAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTCTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑g                                                       <  1:3190089/128‑1 (MQ=255)
                                                                         tttttttttttATTTGTAAATTTTTTAAAAATTTAATTTAAATTTTAAAAAAATA‑C‑‑GTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑g                                                       <  1:4210628/125‑1 (MQ=255)
                                                                         attttttttttATATTAAAA‑TTTTTAAAAAATTTATTTTAAATTTTAAAAAA‑ATT‑ATTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑g                                                       <  2:4538065/125‑1 (MQ=255)
                                                                          tatTTTTTTTTTATATAAA‑TTTTTTAAATATTAATTTTAACTTTTTTAAAATA‑T‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑Ga                                                      <  2:5073943/128‑1 (MQ=255)
                                                                          tatTTTTTGTATTTTCAAA‑TTTTTAAAAAAATAATTTTAAATTGTAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑Ga                                                      <  2:6158936/128‑1 (MQ=255)
                                                                           atTTTTTTTATATTTAAA‑TTTTTTAAAAATTATATTTTATTTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑Gaa                                                     <  2:1865980/128‑1 (MQ=255)
                                                                               ttttttttatttaa‑TTTTTAAAAAATTAATTTTTAATTTTTAAAAATA‑T‑ATTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGa                                                 <  2:1497346/116‑1 (MQ=255)
                                                                               tttGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTT‑‑‑T‑AATGTAAATTAAAATTTTTTGTA‑TTTTTTTTGTTAATTATCAAAAAAAATA‑Taaattaaa                                               >  1:6976900/1‑123 (MQ=255)
                                                                                ttGTATATGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑CTTTTTTTTTTTTTTTTTAA‑AATGAAAATATAAATTTAATGTT‑TTTTTTTTTATAATTAAATAAAAAAATA‑AAAAGTaa                                                >  1:5109861/1‑128 (MQ=255)
                                                                                  tttaattataa‑TTTTTAAAAAATTAAATTTAAATTTTAAAAAATTTC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGaaaa                                              <  2:7685501/119‑1 (MQ=255)
                                                                                   tataTGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAT‑AATTTAAATATAAATTTTATGTT‑TTTTTTTTTATAATTATAAAAAAAAATA‑TAAATAaaaaaaa                                           >  2:1599637/1‑127 (MQ=255)
                                                                                     tttttaaa‑TTTTTTAAAAATTTATTTTTATTTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAat                                           <  1:2471197/123‑1 (MQ=255)
                                                                                     tatGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATGGAAATAAAAATTTTAGTTA‑TTTTGTTTTATATGTATATAAAAAAATA‑TAATTTAAAAAat                                           >  2:7224539/1‑128 (MQ=255)
                                                                                      atGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAATTTAAATTTTTAGGTT‑TTTTTTTTAGTAATTATAAAAAAAAAAA‑AAAAGTaaaaaaat                                          >  1:1553690/1‑126 (MQ=255)
                                                                                       tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTATTTTTTTTTTTTTAA‑AATGTAAATATAAATTTTAGTTA‑TTTTTTTTTATAATTAACTAAAAAAATA‑GAAAGTaaaaaaaa                                          >  1:4904608/1‑126 (MQ=255)
                                                                                       tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑ATTGTAAATA‑AAATTTTTTTTATTTTTTTTGTTAAATTAATTAAAAAAATA‑AAATATAAAAAatat                                         >  1:708525/1‑128 (MQ=255)
                                                                                       tGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATTGAAATATAAATTTTATTTT‑TTTTGTTGTATAAGTATATAAAAAAATA‑TAAAGGaaaaatatt                                         >  2:7099091/1‑124 (MQ=255)
                                                                                         cAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTAAATGTAAAAATAAATTTTATTAA‑TTTTTTTTAAAAATTATATAAAAAAA‑A‑TAAAATAAAAAATAtt                                        >  1:6314511/1‑128 (MQ=255)
                                                                                         cAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑AATGTAAATATAAATTTTAGTTA‑TTTTTTTGTATAATTATATAAAAAAATA‑GAATGGAAAAAATTTTGt                                      >  1:370480/1‑128 (MQ=255)
                                                                                          aaa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTAT‑AATTGAAATTTAAATTTTAGGTT‑TTTTGTTGTCTATGTTTGTAAAAAAATA‑AAAAGAAAAAAAtttt                                        >  2:4910321/1‑128 (MQ=255)
                                                                                           tttttttTAAATAATTATTTTTATATTTTAAAAAAT‑‑‑‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTa                                    <  2:2669905/125‑1 (MQ=255)
                                                                                           aa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTA‑‑ATTGTAAATTTAATTTTTATTTT‑TTTTTTTGTATATTTTGATAAAAAAATA‑TAATGTaaaaatttttttt                                     >  2:6590849/1‑120 (MQ=255)
                                                                                           aa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAT‑ATTGGAAAATTAAATTTTTTTTT‑TTTTTTTTTATAATTTTATAAAAAAATA‑TAAAGTAAAAAATttttttt                                    >  2:4391734/1‑127 (MQ=255)
                                                                                             tttttTAAAAAA‑TAATTTTTAATTTTAAAAAATATC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTa                                    <  2:2091403/127‑1 (MQ=255)
                                                                                               tttttaaaaattaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑T‑AATGTAAATATAAATTTTAGGTT‑TTTTGTTTTTAATGTATATAAAAATTTA‑TAAAGGAAAAATTTTTTTTata                                  >  2:7360689/9‑126 (MQ=255)
                                                                                                  ttaaaaattaattTGAAATTGTAAAAAATAG‑‑‑‑‑‑TTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATa                           <  1:5483666/123‑1 (MQ=255)
                                                                                                   aaaaaaTTAATTTTTAATTTTAAAAAATA‑T‑ATTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTa                              <  1:2577744/128‑1 (MQ=255)
                                                                                                   aaaaaaTTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTATATGTATATAAAAAAATA‑GAAAGGAAAAAATATTTTTAAATGTa                              >  2:7918938/1‑128 (MQ=255)
                                                                                                     aaaattaattTTAACTTTTAAAAAA‑A‑T‑TATTTTATTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATa                           <  2:6048858/126‑1 (MQ=255)
                                                                                                     aaaattaattTTAAATTTTTAAAAAT‑TT‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAAt                            <  1:88098/126‑1 (MQ=255)
                                                                                                       aattaattTGCACTTGTAAAAAATAGC‑‑‑‑‑‑TTTATTTTTTTTTTAT‑AATGTAAATAAAAAATTTATTTA‑TTTTTTGGTCAAAGTAACTAAAAAAAAA‑GAACGGAAAAAAAATATTAAAAAATAATTATaaa                      >  1:3529095/1‑128 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTT‑AATGTAAATATAAATTTTAGGTA‑TTTTGTTGTCTAATTATCTAAAAAAAAA‑TAAAGGAAAAAATATTTTTAAAATTAATaat                         >  2:3971657/1‑126 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑TATGGAAATAAAATTTTTAGGTT‑TTTTGTTGTGTAATTATATAAAAAAATA‑GAATGGAAAATATATTGTTAAAAGTAATACTa                        >  2:860632/1‑128 (MQ=255)
                                                                                                         ttaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTTTTGTATAAGTATATAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAATTAATACTa                        >  2:6458230/1‑128 (MQ=255)
                                                                                                                 aaCTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAAATTTAAATTTTAGTTT‑TTTTTTTTTATAATTATATAAAAAAATA‑AAAAGTAAAAAATATTTTTAAATTTAATAATAAAattttt                >  2:4687652/1‑128 (MQ=255)
                                                                                                                 aaCTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAT‑AATGGAAAAATAAATTTTAGTTA‑TTTTGTTTTATAATTATCTAAAAAAATA‑GAAAGTAAAAAATATTTTTAAAATTAATAATAAAATTATTTa              >  2:1048857/1‑128 (MQ=255)
                                                                                                                  aCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTT‑ATTTGAAATAAAAATTTTAGGTA‑TTTTTTTTTATAATTATATAAAAAAATA‑TAAAGTAAAAAATATTGTTAAAATTAATaaataaataatt                >  2:3469910/1‑117 (MQ=255)
                                                                                                                   tttttttaaaaTATT‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt               <  2:2523631/121‑1 (MQ=255)
                                                                                                                    ttttAAAAAATATT‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTa              <  1:6679766/125‑1 (MQ=255)
                                                                                                                      gTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAA‑AATGAAAAAAAAAATTTTATTTA‑TTTTTTTTTATAATTAAAAAAAAAAATA‑TAAAAAAAAAAATATTTTTAAAATTAAAAATAAAATTATTTAAtt           >  1:4703218/1‑127 (MQ=255)
                                                                                                                       ttaaaaaTTTC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg           <  1:7875646/126‑1 (MQ=255)
                                                                                                                           aaaTAGC‑TTTTTTTTTTTTTTTTTTTAA‑AATTTAAATATAAATTTTTGTTA‑TTTT‑TTTTAAAATTTTTATAAAAAATATAAAAGTAAAAAATTTTTTTAAATTTAATAATAAAATTATTTAAtttaaa       >  2:3320700/1‑123 (MQ=255)
                                                                                                                            aaTAGC‑‑TTTTTTTTTTTTTTTTTTAT‑AATGTAAATATAAATTTTTGGTT‑TTTTTTTTTGAAAGTATATAAAAAAATA‑TAAAGTAAAAAATATTTTTAAAATTAATAATAAAATTAtttaattttaata     >  2:6869903/1‑127 (MQ=255)
                                                                                                                                 |                                                                                                                                  
GATAATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TATTTTTTGTATATGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTAT‑AATGGAAATATAAATTTTAGGTA‑TTTTGTTGTCTAAGTATCTAAAAAAATA‑GAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAA  >  CP016816/165122‑165375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.