| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | 437881 = | 501 (0.100) | 1513 (0.390) | 192/204 | 3.9 | 76.8% | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | = 437884 | 510 (0.130) | intergenic (‑188/+234) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 2525 total aligned reads displayed.
TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATT > CP016816/437760‑438011 | atttttgtagttgtaagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatat > 1:1115504‑M2/125‑128 (MQ=255) ttttgtagttgtaagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcacagcaaacacctccatattacctatagagttaatgatatatatat > 2:3121123‑M2/123‑128 (MQ=255) ttttgtagttgtaagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatat > 2:1649150‑M2/123‑128 (MQ=255) tttgttttaattttcatttttaataaatattataaataaaaattgtatttttaaaataaatattttattaaatcaagcaaataaaaaacctctatattacatatagagttaattatatatatatatat < 1:346099‑M2/10‑1 (MQ=255) gtagttgtaagtttcatttttaataaatattataaataaaaaatgtatttttaaaataaatattttaggaaaagaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat < 2:5509313‑M2/10‑1 (MQ=255) tttttATTTTTTTTAAATATTTTATATAAAAATTTTTTTTTTAAAATAAATATATTATTAAATTAATCAAACAAAAAACCTCTATATATAATATATAGTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatat < 1:3066349/127‑1 (MQ=255) ttgtaagtttcatttttaataaatattagaaataaaaattgtttttttaaaataaatattttatgaaatgaataaaacaaaaaacctccatattacctatagagttaaatatatatatatatat‑‑‑‑atat < 2:1310809‑M2/14‑1 (MQ=255) tgaTTTTTATTAAATATTATAAATAAAAATTTTATATTTAAAATAAATATTTTATCAAATTAATAAAAGAAAAAACCTCAATATTAACTATATAGATA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatatata < 2:5182674/126‑1 (MQ=255) gtaagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagaaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatat > 2:6916433‑M2/113‑128 (MQ=255) ttttttATAAATATTATATATAAAAATTTTATTTTTATAATATATATTTTATTTAATTAATAAAAGATAAAATCTCTATATTATATATATAGTTT‑‑‑AT‑‑‑‑T‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatatatatat < 1:7879059/128‑3 (MQ=255) taagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatata < 2:97694‑M2/17‑1 (MQ=255) taagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatata > 1:7552792‑M2/112‑128 (MQ=255) ttttTATAAATATTATATATAAAAATTGTTTTTTTAAAATAAATATTTTAGTAAATTAATATAATCAAAAAAATCTATATTACATATAGAGTTA‑‑‑TT‑‑‑‑T‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatatatatata < 1:4091112/128‑4 (MQ=255) aagtttcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat > 1:9705778‑M2/111‑128 (MQ=255) attttaatttttaataaaaaatataaataaaaattttatttttaaaaaaaatattttaggaaatcaatcaaagaaaaaacctccatataaactatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑a < 1:1678397‑M2/19‑1 (MQ=255) taataaATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAATAAAATAAAAAACCTAAATATTATATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatatatatatatat < 1:6119909/128‑7 (MQ=255) tttttttttaataaatattagaaataaaaattttatttttaaaataaatatttttgtaaatgaatcaaagaaaaaacatcaatattatatatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atat < 1:393786‑M2/22‑1 (MQ=255) gatatataATAGATATAAAAATTCTATTTATAAAAAATATATATTTTTAAATTAATCAAATAAAAAACCTATATATAAACTATAGAGATa‑‑‑ta‑‑‑‑t‑‑‑‑‑‑atatatatat‑‑‑‑atatatat‑‑atatatatatatatgca < 2:5341532/127‑8 (MQ=255) tcatttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atata < 1:4703671‑M2/23‑1 (MQ=255) ataaataTTATATATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAATCAAATAAAAAAACTCCATATAAAATATATAGTTA‑‑‑AT‑‑‑‑T‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGa < 1:7155796/128‑1 (MQ=255) catttttaataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatat > 2:2894294‑M2/105‑128 (MQ=255) ttataataaatattataaaaaaaaattttatttataaaataaatattttatgaaaagaagcaaacaaaaaacctccatattacctatagagttaaagatatatatatatat‑‑‑‑atatatat‑‑atatatata < 2:10099765‑M2/27‑1 (MQ=255) atTATAAATAAAAATAGTATTTTTAAAATAAATATTTTATGAAATGTATCAAAGAAAAAACCTCCATATTACATATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATaaa < 1:9464036/128‑1 (MQ=255) aataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatatataaa > 2:4502844‑M2/98‑125 (MQ=255) aataaatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑aaatatatatata > 1:6849323‑M2/98‑125 (MQ=255) taaatattagatataaaaattgtatttttaaaataaatattttatgaaatgaagcaaagcaaaaacctccatattatatatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAg < 1:2852605‑M2/33‑1 (MQ=255) taaatattagaaataaaaattgtatttttataataaatattttatgaaattaatcagagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatatatatgca < 1:3234146‑M2/33‑6 (MQ=255) taaatattagaaataaaaattgtatttttaaaatatatattttattaaatgaatcaaagcaaaaacctccatattaactatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatatgcaagcg < 2:9162993‑M2/33‑8 (MQ=255) aaaaaaaaATT‑TTTTTTTATAATAAATATATTATTAAATGAACCAAACACAAAAACTCCATATTAACTATATAGTTATTTATA‑‑‑T‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATa < 1:7687659/128‑1 (MQ=255) aatattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatattaaagcaat > 2:6414892‑M2/94‑119 (MQ=255) atattagaaataaaaattttatttttaaaataaatattttagtaaattaagcaaatcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatcattaactctat < 2:7390389‑M2/36‑13 (MQ=255) atattagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatataataaagcta > 2:4731503‑M2/93‑119 (MQ=255) tattataaataaaaattttatatttaaaataaatattttagtaaatgaatcaaagcaaaaacctccatattacatatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atatatatatatgcaagcg < 2:1888029‑M2/37‑10 (MQ=255) tattagaaataaaaattgtatttttaaaataaatattttaggaaattaatcaaataaaaaacctctatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGAt < 2:3812053‑M2/37‑1 (MQ=255) tagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATc > 1:6667036‑M2/91‑128 (MQ=255) attataaataaaaattttatttttaaaaaaaatattttatgaaattaatcaaacaaaaaaactccatattaactatagagttaattatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATc < 1:5591682‑M2/38‑1 (MQ=255) tataaataaaaattgtatttttaaaataaatattttattaaattaatcaaataaaaaaaatacatattaactatagagttaaagatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATcac < 2:2083370‑M2/40‑2 (MQ=255) ttagaaataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCTAtcatc > 1:3696749‑M2/88‑126 (MQ=255) agaaataaaaattgtatttttaaaataaatattttaggtaatgaagaaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATACATAT‑‑ATATATATATGCAAGCGATCAGc < 2:2297308‑M2/41‑1 (MQ=255) aaTTTTATTTTTAAAATAAATATTTTATTAAATTAATCAAATAAAAAAACTAAATAATATCTATAGAGTTA‑‑‑ATTATAT‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATgg < 2:960115/128‑1 (MQ=255) ttttATTTTTATAATAAATATTTTATTTTATGAATAAAATAAAAAACATCTATATATAATATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATgg < 1:7362883/125‑1 (MQ=255) aataaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctagagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATTTATGAGAGCGATCAGCATa > 1:8467360‑M2/85‑128 (MQ=255) ataaaattagtttttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattaactatagagttattgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATaa < 1:6005809‑M2/45‑1 (MQ=255) aaaaattgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCTAGCGATCAGCataata > 2:112828‑M2/82‑126 (MQ=255) aattgtatttttaaaataaatattttaggaaatgaataaaataaaaaaactccatattaactatagagttaatgatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAAt < 2:7885367‑M2/48‑1 (MQ=255) aaatagtatttttaaaataaatattttattaaatgaatcaaataaaaaaaatataaattacatatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATg < 2:3959898‑M2/49‑1 (MQ=255) tgtatttttaaaaaaaatatttttatgaaatgaagcaaatcaaaaacatccatattacctatagagttaattatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTg < 1:2682404‑M2/52‑1 (MQ=255) aaatgtatttttaaaataaatattttatgaaatgaatcaaagcaaaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTg < 2:7726113‑M2/52‑1 (MQ=255) tgtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATAAAATCTatcagaaaaaaaaagcaa > 1:5341532‑M2/76‑122 (MQ=255) gtatttttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGAAAGATATCATAATAAAATGGTTaa > 1:83044‑M2/75‑128 (MQ=255) tttttaaaataaatattttagtatattaatcaaagaaaaaaactccttattaaatatagagttatttatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAAtt < 1:9920311‑M2/57‑1 (MQ=255) ttttaaataaatattttaggacatgaagaaaatcaaaaacctacatattaactatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa < 1:2022396‑M2/59‑1 (MQ=255) tttaaaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGAATAAAATGGTGAAATttata > 2:3317682‑M2/68‑126 (MQ=255) ttttAGTAAATGAAGCAAAGAAAAAACATCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa < 1:8646150/128‑1 (MQ=255) aaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatatatatatat‑‑‑‑atatatat‑‑atata < 1:8066773‑M2/23‑1 (MQ=255) aaataaatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATAT‑T‑CAAACTCTCAGAATAAAATGTAGAAATTTATATATg > 1:4297690‑M2/66‑128 (MQ=255) aaatattttattaaattatgcaaatcaaaaaactcgatattacctatatagatatttatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:6475058‑M2/67‑1 (MQ=255) aaatattttatgatattcagcaaatcaaaaacctccatataaacaatagagttaattatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg < 1:4523469‑M2/67‑1 (MQ=255) aatattttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTgtgt > 1:1311068‑M2/61‑128 (MQ=255) aaTGAAACAAATCAAAAACCTCCATATTACCTCTAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa < 2:3668610/128‑1 (MQ=255) ttttaggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCTAGCGATGATCTTAATATTGTTATATTTAGATCTGAGTTGGTCt > 2:4153181‑M2/55‑128 (MQ=255) aggaaatgaagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAATATGGTGAATTATAGAGCTGAGTTGGTCTTa > 1:1852138‑M2/53‑128 (MQ=255) taatgtatcatagcaataacctcaatattacatatatagttattgatatATATAAATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAt < 1:2386409‑M2/79‑1 (MQ=255) ataaaaaaCATCCATATAAACTATAGAGTTT‑‑‑AT‑‑‑‑T‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt < 1:5117082/125‑1 (MQ=255) atcaaataaaaaacatctatattatctatagagataattatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt < 2:9322772‑M2/83‑1 (MQ=255) aagcaaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa < 2:4969265‑M2/84‑1 (MQ=255) aaaCCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑GATATATATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATTCAAGCGCTCAGCATAAAATGTTGAAATATATATCTGTGTGGATCTTATATTTTTAGTTtatatt > 2:6731247/1‑128 (MQ=255) caaagcaaaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCATAATAAAATTTTTAAATTTATATCTGATTTTGTATAATATTTGTAttt > 2:7205603‑M2/42‑128 (MQ=255) acacaaaaacctccatcttacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta < 2:7087555‑M2/91‑1 (MQ=255) aagcaaaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta > 2:8077925‑M2/38‑128 (MQ=255) aaaaacctagatataagctatagagtttattatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt < 2:7552792‑M2/93‑1 (MQ=255) aaaacctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATA‑A‑GCAAGCGATCAAAATAAAATGGATATATTTATATCTGAGTTGGTCTTAATTTTTTAGTTTttatttat > 1:2518889‑M2/35‑128 (MQ=255) aaaacatatatattaaatatagagttaattttatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt < 1:10192006‑M2/94‑1 (MQ=255) aatctcaatattacctatagagttaaagatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat < 2:6259224‑M2/96‑1 (MQ=255) aaaacctccatattacctatagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCTATCAGCATAAAATGGTGAAATTTAGATATGAGTTGTTCTTAAATTTTTAGTTTttatttat > 2:9000116‑M2/33‑128 (MQ=255) ttACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATATATAAATATATAT‑‑ATATATATATACAATCGCTCAAAAAAAAGTTGTTATATTTAGATATTATTTAGTAATAAATTTTTAGTTATTATTTATAGTTtatata > 2:10397787/1‑126 (MQ=255) tccatattacctatagagttaatgatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGAATAAAATGGTGAAATATATATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAg > 2:5674260‑M2/31‑128 (MQ=255) tACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATATAGATCTGATTTGGTCTTAAATTTGTAGTTTTTATTTATTGTTTATAAAGTtaa > 2:4329232/1‑128 (MQ=255) cctccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGCTCAGCATAAAATGGTTAAATTTATATCTGAGTTGGTATTAAATTTTTAGTTTTTATTTATAg > 2:2463179‑M2/31‑128 (MQ=255) ccatattacctatagagttaatgatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATTCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTATATTTTTATTTTTTATTTATAGt > 1:10382415‑M2/30‑128 (MQ=255) ccatattacctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGAGATCAGCATAAAATGGATAAATATAGATCTGAGTTGTTCTAAAATTTTTAGTTTTTATTTATagtat > 2:8568023‑M2/28‑126 (MQ=255) gTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATATAAATATATATATGCAAGATATCAACATAAAATTGTGAAATTTATATCTGAGTTTGTATTAAATTTTTAGTTTTTATTTATAGTTTATAAAGATTATAATTTAg > 2:2661751/1‑128 (MQ=255) acctatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGAGATCATAATAAAATTGTGATATTTATATCTGAGTTTGTGTTAAATATGTTGTTTTTATTTATAGTTTATAAAGt > 1:2196861‑M2/21‑128 (MQ=255) atatagagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta < 1:6271176‑M2/110‑1 (MQ=255) tagagttaatgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTTGTTTTTATTTATAGTTTATAAAGTTaataat > 1:1510037‑M2/14‑128 (MQ=255) gagttaatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTGTGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGTTaataat > 2:657806‑M2/14‑128 (MQ=255) atgatatatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt < 1:9232111‑M2/117‑1 (MQ=255) taatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAg < 2:8297284‑M2/119‑1 (MQ=255) taatgatatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGAAAGAGATCATCATAAAATTGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAATTtat > 2:3499418‑M2/10‑127 (MQ=255) tatatATATATATAT‑‑‑‑ATATAAAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt < 1:4914732‑M2/123‑1 (MQ=255) tgatATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTGTTCTTAAATTTTTAGTTTTTATTTATATTTTATAAAGTTAATAATTTAGAtttt > 1:8842527‑M2/5‑128 (MQ=255) atatatatatatat‑‑‑‑atatatat‑‑atatatatatGCTAGAGATCAGCATAATTTTTTTATATTTAGATCTGAGTTTGTCTTAAATTTTTATTTTTTTTTTATATTTTATATATTTATTTATATAGAtttt > 2:1498410/5‑128 (MQ=255) atATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa < 2:6084729‑M2/126‑1 (MQ=255) atATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTATAATTTATTGTTTTTATTTATAGTTTAAAAAATTAATAATTAATATTTTTa > 1:6981895‑M2/3‑128 (MQ=255) tatatatatat‑‑‑‑atatatat‑‑atatatatttGCACGCGCGCAGAATAAATTGTTGATATTTAGATCTGAGTTTGTCTTTATTGTGTATTTTTTTTTTATAGTTTATATAGTTAATATTTTAGATTTTTaa > 2:5909142/2‑128 (MQ=255) atatatatat‑‑‑‑atatatat‑‑atatatatatTAAAGAGATAATAATAAAATTGTTAAATATATATCTGAGTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATAAATTTAATAATTTATATTTTTAat > 1:9050437/1‑128 (MQ=255) atatatatat‑‑‑‑atatatat‑‑atatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat < 2:10253901/128‑1 (MQ=255) tatatatat‑‑‑‑atatatat‑‑atatatatatGCAAGCGATCAGAATATAATGGTGATATTTAGATCTGAGTTTTTCTTAAATTTTTATTTTTTATTTATAGTTTTTATATTTATTAATTTAGATTTTTAata > 2:8771216/1‑128 (MQ=255) atatatat‑‑‑‑atatatat‑‑atatatatatGAAAGCTATCAGAATAAAATTGTGAAATTTATATCTTATTATGTCTTAAATTTTTAGTTTTTATTTATATTTTATATAGATAATATTTTATATTTTTAatat > 1:1000311/1‑128 (MQ=255) tatatat‑‑‑‑atatatat‑‑atatatatatGCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTTGTCTTAAATTTTTTGTTTTTATTTATATTTTATAAATTTAATAATATATATTTTTAATAtt > 1:5814063/1‑128 (MQ=255) | TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTA‑‑‑AT‑‑‑‑G‑‑‑‑‑‑ATATATATAT‑‑‑‑ATATATAT‑‑ATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATT > CP016816/437760‑438011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |