BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	311153 =	2682 (0.550)	547 (0.140)	164/208	12.1	20.6%	intergenic (‑76/‑238)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
*	?	CP016816	= 311148	2008 (0.500)	547 (0.140)	164/208	12.1	20.6%	intergenic (‑71/‑243)	JCVSYN2_01300/JCVSYN2_01305	hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3208 total aligned reads displayed.

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280

cAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTGATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatat                                                                                                                                 <  1:461598/128‑1 (MQ=255)

    tGTAATAAGAAATCCAAATTAACTTAAAATTGTAATTAAATTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATTCGATTCAAAACATATATAACATACATTCAT‑‑tatatatat                                                                                                                             <  1:8944170/128‑1 (MQ=255)

       aataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatata                                                                                                                          >  1:2954003/1‑128 (MQ=255)

        ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatttat                                                                                                                         >  2:1180313/1‑128 (MQ=255)

        ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatat                                                                                                                         <  1:6373687/128‑1 (MQ=255)

          aaCTAATACAAATGAAATTAAAATTTTAATTAACTTTTTAATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatat                                                                                                                       <  1:972843/128‑1 (MQ=255)

           aatAATCCAAATGAAATTAAAATTGTAATTAAATTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                      <  1:4836596/126‑1 (MQ=255)

            cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑taaatatatatatatat                                                                                                                     >  1:10362570/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                    >  2:741559/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                    >  1:2366874/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                    >  2:1753801/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                    >  2:4330139/1‑128 (MQ=255)

             tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCAT‑‑tataaaaatatataaata                                                                                                                    >  2:225476/1‑128 (MQ=255)

              aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                                   >  1:1000916/1‑128 (MQ=255)

              aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATTCATTCAT‑‑tatatatatatatatatat                                                                                                                   >  2:1347281/1‑128 (MQ=255)

                tatatattttattAAAATTGTATTTATATTTTTATTTTTAAACACACCTTTTAAAAAAATATAATATTTTTTACATAATATTCTAAAAATATATATAATACATTCAT‑‑tatatatatatatatatatat                                                                                                                 <  1:10189824/117‑1 (MQ=255)

                tCCAAATGATATTAAAATTGTTAATAAATATTTCATTTTACACACCCATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatat                                                                                                                 <  2:6650074/128‑1 (MQ=255)

                  taaaTGATCTTAAAATTGTATATAACTTTTTCATTTTACAGACTCCTTATTAAAAAATAAATTACTTGTTAGATACTATTCATAACTTATATAACATTCATTCAT‑‑tatatatatatatatatataatg                                                                                                               <  1:6209593/127‑4 (MQ=255)

                   aaaTTAACTTAAAATTGTAATTAACTTTTTAATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatata                                                                                                              <  1:941991/128‑1 (MQ=255)

                    aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatat                                                                                                                     >  2:9048711/1‑120 (MQ=255)

                      tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAACCATATATAACATACATTCAT‑‑tatatatatatatatatatatataatg                                                                                                           >  1:9105240/1‑125 (MQ=255)

                      tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatatatat                                                                                                           >  1:8269542/1‑127 (MQ=255)

                         aattATAATTTTAATTAACTTTTTCATATTACACACCACTTATTAAAAAAAAAAAAACTTGATACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatataatgaatgtat                                                                                                        <  1:6947807/126‑11 (MQ=255)

                         aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatattgaaata                                                                                                        >  1:7895883/1‑121 (MQ=255)

                          cTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatataaagaaatat                                                                                                       >  2:572008/1‑119 (MQ=255)

                             aaaaTTTTTATAAAATTTATAATTTTAAACACCCCTTATTATAAAATAATATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑T‑T‑TATATATATATATATATATATAATGCAATATg                                                                                                  <  2:9209681/128‑1 (MQ=255)

                              aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataattaaatatgt                                                                                                   >  1:3144149/1‑117 (MQ=255)

                               aaTTGTATTTAAATTTTTAATTTTAAACAACCCTTATTAAAAAATAAAAAAATTGTTAAATACTATACAAAAAATATATAACATAAATTCAT‑‑TATATATATATATATATATATATATAATGCAATATg                                                                                                  <  1:9279354/128‑1 (MQ=37)

                                aTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGTTTCTAAACATATATAACATACATTCAT‑‑TAT‑T‑TATATATATATATATATATAATGCAATATGTat                                                                                               >  2:7281835/1‑127 (MQ=255)

                                     atttATCTTTTTCATTTTACAAACACATTATTATAAAATAAAATAATTGTTAAATAAGATTATAAAAATATATAAAATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaa                                                                                          <  2:2065000/126‑1 (MQ=255)

                                      aTTAAATTTTTCATTTTACAAACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaaa                                                                                         <  1:8618357/128‑1 (MQ=255)

                                       ttAACTTTTTCATTTTAAACACAACTTATTATAAAATAAAATATTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGaaaa                                                                                        <  2:2759545/128‑1 (MQ=255)

                                         aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATAAAATATGTAAAAGAAAata                                                                                      >  2:3498712/1‑128 (MQ=255)

                                          aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATTTAAATTAatatat                                                                                     >  2:7618163/1‑128 (MQ=255)

                                          aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAatat                                                                                     <  2:4097142/128‑1 (MQ=255)

                                          aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATAAAAatat                                                                                     >  1:5221804/1‑128 (MQ=255)

                                           cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑AAT‑AAATATATAAATAAAAatata                                                                                    >  2:10039268/1‑127 (MQ=255)

                                                taaTTTTACACAATACTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataat                                                                             <  2:6475958/126‑1 (MQ=255)

                                                 cATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTataata                                                                            <  2:979339/128‑1 (MQ=255)

                                                    tttACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAg                                                                           <  2:1890451/128‑1 (MQ=255)

                                                     ttatactcacattattaAAAAATAAAATAGTTGTTACATACGATTCAAATAATATATAACATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGc                                                                          <  1:2775756/117‑1 (MQ=255)

                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATA‑A‑ATATATATATATATAATACAATATGTAAATGAAAATATTATataatatc                                                                          >  2:6061910/1‑126 (MQ=255)

                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTATATGAAAATATGTTATAATAGc                                                                          >  1:5049670/1‑128 (MQ=255)

                                                     ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTGATAATAGc                                                                          >  1:4233220/1‑128 (MQ=255)

                                                     attaacaaaccTTATTAAAAAATAAAATACTTGTTATATAAGATAAAAAACATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGc                                                                          <  1:9894714/119‑1 (MQ=255)

                                                      taaacacCCATTATTAAAAAATAAAATAATTGTTAAATACGATTAAAAACATATATAACAAAAATT‑AT‑‑T‑TATATATATATATATATATATATAATGCAATATGTAAATGAAATTATGGTATAATAGCa                                                                         <  1:6584442/125‑1 (MQ=255)

                                                       aaactccacTTATTAAAAAATAAAATACTTGTTATATACTATTAAAAACATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCaa                                                                        <  2:6880431/120‑1 (MQ=255)

                                                           acaccTTATTAAAAAATAAAATACTTGATAAATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                                    <  2:3822371/125‑1 (MQ=255)

                                                            ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGAAATATGTAAATGAAAATATGGTATAATATCAAccttata                                                                 >  1:3716664/1‑123 (MQ=255)

                                                            caccTTATTTAAAAATAAAATATTTTTTAAATAAGATTCAAAAAATATATAACATAAATTC‑T‑‑T‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                 <  1:5780590/126‑1 (MQ=255)

                                                             taattattaAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTAAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                                <  2:2622903/125‑1 (MQ=255)

                                                              ccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtata                                                               <  1:8747044/128‑1 (MQ=255)

                                                               cTTATTAAAAAATAAAATACTTGTTACATACGATTAAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTATATAATAGCAACAGATtat                                                                >  2:6356426/1‑128 (MQ=255)

                                                                ttattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTta                                                                 <  2:9395360/128‑1 (MQ=255)

                                                                 tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATATAAATAAATATTTAAAAGAAAATATTGTATAATAGCAAACGatt                                                                  >  2:5475286/1‑128 (MQ=255)

                                                                 tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATTTAAATGAAAATATTTTATAATATAAACAGTATATaa                                                              >  2:2439351/1‑128 (MQ=255)

                                                                   ttaTAAAATAAAATAATTTTTATATATTATTAAAAAAATATATAACATAAATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                            <  2:3363816/128‑1 (MQ=255)

                                                                    taAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGCAAACGTTTATAAAGTaa                                                         >  1:8417596/1‑128 (MQ=255)

                                                                        aaatataataCTTGTTATATAAGATTCAAAAAATATATAACATACATT‑AT‑‑T‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                       <  2:3660457/128‑1 (MQ=255)

                                                                         aaaaaaaaaCTAGTAACATACGATTACAAAAATATATAACATACAGTCA‑‑‑TA‑ATATATATATATATATATATATAATGCAATATGAAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                      <  1:5936363/125‑1 (MQ=255)

                                                                            aaattaCTTGTTACATACGATTCAAAACATAAATAACATACATTCA‑‑‑‑ATATATATATAAATAAATATATAAAATTAAATAAAAAAATAAAAAAATAATATAATAAAAAACGAATATATATTaaaaaact                                                   >  1:4433116/1‑126 (MQ=255)

                                                                            aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaa                                                     >  1:1753581/1‑128 (MQ=255)

                                                                                  cTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑TATATATA‑‑‑A‑ATATATATATATAATGCAATATGAAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:10383156/128‑1 (MQ=255)

                                                                                   ttGTTACATACTATTCAAAAAATATATAACATAATTTCAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAatat                                          <  1:9578758/128‑1 (MQ=255)

                                                                                   ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAAAGAAAATATTGTATAATAGACACCTTTTATAAAATAAAAAAATAGAAAat                                            >  1:1951101/1‑128 (MQ=255)

                                                                                   ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATAAAATATTTAAATTAAAATATTTTATAATATCAAACTTATATAAATTAAAAAAATATTAAat                                            >  1:7707063/1‑128 (MQ=255)

                                                                                    ttttACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:10212228/126‑1 (MQ=255)

                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑‑‑AA‑GAAATATCTAAATGAAAATATGATATAATATCAACCGTTTATATAGTAAAAAAATAGTAAAtata                                         >  1:3519743/1‑128 (MQ=255)

                                                                                    tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                           <  2:958831/128‑1 (MQ=255)

                                                                                       tataTAAGATTAAAAAAATATATAACATAAATTAAT‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtacta                                      <  1:8108459/125‑1 (MQ=255)

                                                                                       tACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATAATTCTATATGTAAATGAAAATATGGTATAATAGAAACTGTATATAAATTAAAAAAATAGTAAAtataatt                                      >  1:3355711/1‑125 (MQ=255)

                                                                                         cATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATTTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATATTAAATAtacta                                      >  2:8273184/1‑128 (MQ=255)

                                                                                             cGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAAATCAATATTAAAATTAAAATATTATATAATATAAACATTTTATAAATAAAAAAAAAAGTAAATAtacaaat                                    >  1:2528668/1‑124 (MQ=255)

                                                                                              gATTAAAAACATATATATAATATATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                                 <  2:8645394/128‑1 (MQ=255)

                                                                                                 tCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTa                              <  2:8853374/128‑1 (MQ=255)

                                                                                                    aaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATTTAAATGAAAATATTATATAATAGAAAAAGTTTATAAATTAAAAAAATATTAAATAtactaataatataata                           >  2:7787549/1‑117 (MQ=255)

                                                                                                      aCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACtaat                         >  1:5600728/1‑128 (MQ=255)

                                                                                                      aCATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         <  2:8478965/128‑1 (MQ=255)

                                                                                                      aCATATATAAAATAAATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaat                         <  2:5287114/128‑1 (MQ=255)

                                                                                                        atatatAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATTTAAATAAAAATATTTTATAATAGAAACAGTTTATAAATTAAAAAAATAGTAAATATACTAATTATTTAAtaaaaa                       >  1:2192100/1‑128 (MQ=255)

                                                                                                           tataACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                      <  2:2979628/128‑1 (MQ=255)

                                                                                                               acatacatTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                  <  2:3127678/128‑1 (MQ=255)

                                                                                                               acatacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAAAGAAAATATGGTATAATATCAACCGTTTATAAAGAAAAAAAATATTAAATATACTAATTATTTAATAATAAAATCttt                >  1:1541639/1‑126 (MQ=255)

                                                                                                                 atacatTCAT‑‑TATATATATATATATATATATATA‑AA‑GAAATATGTAAATGAAAATATTGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt              >  2:4519844/1‑128 (MQ=255)

                                                                                                                  tacatTCAT‑‑TATATATATATATATATATATATAAAATGAAATATGTAAATGATAATATGGTATAATAGAAACCGTTTATATAGAAAAAAAAAAGTAAATATACTACTTATTATATAATATAAACTAtt               >  1:675723/1‑128 (MQ=37)

                                                                                                                  tacatTCAT‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtttt             >  1:7095735/1‑128 (MQ=255)

                                                                                                                  tacatTCAT‑‑‑‑TATATATATATATATATATATATAATGAAATATGAAAATGAAAATATTTTATAATAGCAACATTTTATAAAATAAAAAAATATAAAATATAATAATTATTTACAAATAAAATCTAtttt             >  2:6235331/1‑128 (MQ=255)

                                                                                                                   acataaaaaaattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAt                <  2:7098419/116‑1 (MQ=255)

                                                                                                                       acattaattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttttt            <  1:6080156/120‑1 (MQ=255)

                                                                                                                        cattcattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTttta           >  1:7470537/8‑128 (MQ=255)

                                                                                                                          tatattatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt         <  1:7300575/123‑1 (MQ=255)

                                                                                                                             ttattatttatatatatatatatataATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa      <  1:3999110/124‑1 (MQ=255)

                                                                                                                             attatatatatatatatatatatataATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa      >  1:1077132/3‑128 (MQ=255)

                                                                                                                              atatatatatatatatatatatataTTGCAATATGTAAATGAAAATATGGTATTATAGCAACAGTTTATAATGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa     >  2:5086352/1‑128 (MQ=255)

                                                                                                                               tatatatatatatatatatatataATGCAATATGTAAATGAAAATATTTTATAATATCAAAAGTTTATAAAGTAAAAAATTAGAAAATATACTAAATATATACAAATAAAATATATTTATAATAaaaa    >  2:5917332/1‑128 (MQ=255)

                                                                                                                               tatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa    >  1:5413210/1‑128 (MQ=255)

                                                                                                                               tatatatatatatatatatatataATGAAATATGTAAATGAAAATATGTTATAATAGAAACATTTTATAAAGTAAAAAAATAGTAAATATAATAATTATTTAATAAAAAAATCTATTTATATTTaaaa    >  2:1567878/1‑128 (MQ=255)

                                                                                                                               attatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa    <  2:7999880/126‑1 (MQ=255)

                                                                                                                               aatatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa    <  2:4801280/127‑1 (MQ=255)

                                                                                                                                atatatatatatatatatatataATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGAAAAAAAATATTAAATATACTACTTATATAATAATAAAATCTATTTATATTTaaaaa   >  1:1264654/1‑128 (MQ=255)

CAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAA  >  CP016816/311026‑311280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.