BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	437885 =	1171 (0.650)	78 (0.050)	58/204	40.8	7.9%	intergenic (‑189/+233)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	= 437880	876 (0.600)	78 (0.050)	58/204	40.8	7.9%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1249 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

 ttattaTTGTAGTTGTAAGTTTCATTTTTAATAAATATAAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAATTGAAGAAAAGCAAAAACCTCCATATTACATATAGAGATAAT‑‑‑‑G‑‑‑‑atatat                                                                                                                                >  2:2183491/1‑128 (MQ=255)

 ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCATAAACGTCCATATTACCTATAGAGTTATT‑‑‑‑G‑‑‑‑atatat                                                                                                                                >  2:634991/1‑128 (MQ=255)

     ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatat                                                                                                                            >  2:929829/1‑128 (MQ=255)

     aactacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatat                                                                                                                            >  1:3253535/12‑128 (MQ=255)

        tacaaaaatAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatata                                                                                                                         >  1:3147182/9‑128 (MQ=255)

        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGATGCAAAGCAAAAACCTACATATTACATATATATATAAT‑‑‑‑G‑‑‑‑atatatatatata                                                                                                                         >  2:3210105/1‑128 (MQ=255)

        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatata                                                                                                                         >  1:1280778/1‑128 (MQ=255)

           agatttAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatat                                                                                                                      <  1:3102422/123‑1 (MQ=255)

            gTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatata                                                                                                                     <  1:434384/128‑1 (MQ=255)

             ttGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatat                                                                                                                    >  2:1398522/1‑128 (MQ=255)

              tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAGAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatata                                                                                                                   >  2:1876764/1‑128 (MQ=255)

                tAATTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatata                                                                                                                 <  1:3773034/128‑1 (MQ=255)

                  attttAATTTTTAATAAATATTATAAATATAAATTGTATTTTTAAAATAAATATTTTTTGAAATTAATCAAATCAAAAACCTCAATATTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                               <  2:3154616/126‑1 (MQ=255)

                  aGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatata                                                                                                               <  1:61397/128‑1 (MQ=255)

                   gtttattttttAATATATATTAGATATAAATATTTTATTTTTAATATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATAAACTATAGAGTTTAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                              <  2:874759/122‑1 (MQ=255)

                     ttaaTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                            <  2:3038308/125‑1 (MQ=255)

                     ttCATTTTTAATAAATATTATATATAAAAATTTTATTTTTAAAATAAATATTTTTGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑‑‑T‑‑‑‑atatatatatatatatatatatatat                                                                                                            <  2:2108768/128‑1 (MQ=255)

                          ttttAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGAAAAGAAAAAAACTCCATATAACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCa                                                                                                       <  1:1235557/128‑1 (MQ=255)

                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatataata                                                                                                      >  1:3040576/1‑124 (MQ=255)

                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTAACTATAGAGATAAT‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAg                                                                                                     <  1:877381/128‑1 (MQ=255)

                            ttAATAAATATTAGAAATAAAAATTTTTTTTTTAAAATAAATATATTATGATATCAAGCAAAGCAAAAACATCAATATTAAATATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAg                                                                                                     <  2:2434771/128‑1 (MQ=255)

                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa                                                                                                  <  1:2866330/128‑1 (MQ=255)

                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatataatcacgcga                                                                                                    >  1:2019207/1‑119 (MQ=255)

                              attaaataTTTTATATATAAATTTTTTTTTTATATTAAATATTTTATTAATTTAATCAAACAAAAAAAATACATATTAAATATATATTTATT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatatatgcaag                                                                                                   <  2:128787/126‑8 (MQ=255)

                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGct                                                                                                   >  2:3863129/1‑127 (MQ=255)

                               ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑atatatatatatatatatatatatatatatgcaagc                                                                                                  >  1:67639/1‑120 (MQ=255)

                                taaaatttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGAt                                                                                                 <  2:1976949/122‑1 (MQ=255)

                                 aaataTTATATATAAAAATTTTATATTTAAAATATATATTTTATTAAATGAATAAAATAAAAAACATCAATATTAAATATAGAGTTAATTA‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGa                                                                                                  <  2:477388/128‑1 (MQ=255)

                                  aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCTAGCGATCa                                                                                               >  1:1480051/1‑128 (MQ=255)

                                   atatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAg                                                                                              <  1:1714230/128‑1 (MQ=255)

                                    tatTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                         <  1:1872008/128‑1 (MQ=255)

                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCTGc                                                                                             >  2:3445200/1‑128 (MQ=255)

                                      ttAGATATAAAAATTTTATTTTTAAAATATATATTTTATTAAATTATTCAAAGAAAAAACATACATATTAACTATAGATATTAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCAt                                                                                           <  2:3539370/128‑1 (MQ=255)

                                      ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATcatcat                                                                                           >  1:1106003/1‑128 (MQ=255)

                                         gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGAATaaa                                                                                        >  1:1932273/1‑128 (MQ=255)

                                          aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAATAGCAAAAACCTCCAGATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATTTATGAGAGCGATCAGCAGaata                                                                                       >  2:774149/1‑126 (MQ=255)

                                           aaTAAAAATTGTATTTTTAAAATATATATTTTAGGAAAAGAAGCACAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAt                                                                                      <  1:3646909/128‑1 (MQ=255)

                                           aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGaa                                                                                <  1:1058594/128‑1 (MQ=255)

                                             tAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAt                                                                                      <  1:1405896/128‑1 (MQ=255)

                                              aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGa                                                                                 >  2:1544543/1‑128 (MQ=255)

                                                aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCTATCAGCATAATATGGTGa                                                                                 >  1:700345/1‑128 (MQ=255)

                                                aaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATc                                                                       >  2:1710479/1‑128 (MQ=255)

                                                    tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATAT‑GAT‑‑‑AGCTATCATAATAAAATTGTGAAATTTata                                                                         >  1:1620315/1‑126 (MQ=255)

                                                     gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCTATCAGAAGAAAATAGTCATAttt                                                                            >  2:1235753/1‑128 (MQ=255)

                                                     gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAACCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAttt                                                                            <  2:422142/128‑1 (MQ=255)

                                                      tATTTTTAAAATAAATATTTTAGTAAAAGAACCAAAGCAAAAACCTCCATATAAACAATAGAGTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTa                                                                           <  2:2529948/128‑1 (MQ=255)

                                                         ttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGATATCAGCATAAAATTGTGAAATTTat                                                                          >  2:3602089/1‑127 (MQ=255)

                                                            tataattaataTTTTAGGAAATGAATCTAATAAAAAACCTCCATATTAACTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:2123716/125‑1 (MQ=255)

                                                            tAAAATAAATATTTTAGTTAATTAAGAAAATCAAAAACCTCCATATTACATATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:2917185/128‑1 (MQ=255)

                                                              aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:1811317/128‑1 (MQ=255)

                                                               aataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATAT‑T‑CAAGAGATCAGCATAAAATTGTGAAATTTAGATCTGAGttt                                                                >  1:1352028/1‑127 (MQ=255)

                                                                 taaataTTTTATGAAATGAAGCAAAGAAAAAACCTCAATATAAACTATAGAGTTAAT‑‑‑‑GATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGa                                                                    <  1:929829/128‑1 (MQ=255)

                                                                 taaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  1:1670079/128‑1 (MQ=255)

                                                                    atatTTTAGTAATTGCATCAAAGCAAATACCTCCATATTACCTATAGATTTAAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                           <  2:1801718/128‑1 (MQ=255)

                                                                     aatTTTATGAAATGAACCTCATCTAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                            <  1:2196543/127‑1 (MQ=255)

                                                                      atattattcaaTGAATCAAAGAAAAAACATCCATATTACCTATAGATTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  2:2774768/119‑1 (MQ=255)

                                                                       ttttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                          <  1:503624/128‑1 (MQ=255)

                                                                        tttATGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  1:577175/128‑1 (MQ=255)

                                                                        tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTTGTCTTaa                                                         >  1:3841126/1‑128 (MQ=255)

                                                                         ttattaaaTGAAGCAAATCAAAAACATCCATATTAACTATAGAGATAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  1:101/123‑1 (MQ=255)

                                                                         ttAGGAAATGAAGAAAAGAAAAAAAATACATATTATCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        <  1:2776233/128‑1 (MQ=255)

                                                                          tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCGATCAGAATAAAATTTTGAAATTTATATATGAGTTTGTATTAAAt                                                       >  1:2577158/1‑128 (MQ=255)

                                                                          tAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAATCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTGGTCTTAAAt                                                       >  2:134492/1‑128 (MQ=255)

                                                                           aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGTGTTGGTCTTaaa                                                        >  1:2084408/1‑128 (MQ=255)

                                                                            gtaaaTGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  2:2707394/126‑1 (MQ=255)

                                                                            ggatatgactctaagcaaaAACCTCCATATTAACAATAGAGATAATTATAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  1:79879/116‑1 (MQ=255)

                                                                            ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTATATCTGAGTTGGTCTTTAAttt                                                     >  2:3335992/1‑128 (MQ=255)

                                                                             taaaTGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTATT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                                  <  1:2723840/127‑1 (MQ=255)

                                                                                 tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATTGTGATATTAAGATCTGAGTTTGTCTTAAATTTGTAGt                                                >  1:3417689/1‑128 (MQ=255)

                                                                                 tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATA‑A‑ATATATATATATATATATGCAAGCGATCAGCATATAATGGTGATAGTATGATCTCAGTTGGTCGTAAATTTGTTGttt                                              >  2:1610604/1‑128 (MQ=255)

                                                                                    agcaaagcaaAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATAAGCGAGAGATCATAATTATATTGTGATATTTATCTCTGAGTGTGTGTTTAATTTTTAGtttt                                             >  2:2047307/1‑128 (MQ=255)

                                                                                     gcaaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTAGTTtttat                                          >  2:103320/1‑128 (MQ=255)

                                                                                     ccaaagcaaaAACCTCAATATAAACTATAGAGTTAAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                          <  2:3722145/127‑1 (MQ=255)

                                                                                      aaaatcaaaAACATTAATATAATATATAGATTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                           <  2:1471894/127‑1 (MQ=255)

                                                                                        aagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTTATATTTATATCTGTGTTGGTCTTATATTTGTAGTTtttata                                         >  1:2490523/1‑127 (MQ=255)

                                                                                                aCCTCAATCTTATATATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGttt                                 <  2:2841478/128‑1 (MQ=255)

                                                                                                   tCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATA‑‑‑‑‑A‑‑‑ACCCGATCAGCAAAAAAAGTTGATATATAGATCTGTGTGTTTCTTAAATTTTTAGTTTTTATTTATAGATTATAAAGAtatt                      >  1:2643012/1‑126 (MQ=255)

                                                                                                    ccATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAATATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaa                             >  2:1116605/1‑128 (MQ=255)

                                                                                                      atatTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                         >  2:2333717/1‑128 (MQ=255)

                                                                                                        atTACCTATAGAGTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGAGAAATTTATATCTGAGTTGGTCTAAAATTTGTAGTTTTTATTTATATTTTATATAg                           >  1:3195441/1‑128 (MQ=255)

                                                                                                                taGAGTTAAT‑‑‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGATAATAATATAg               >  1:969222/1‑128 (MQ=255)

                                                                                                                 agagTTAAT‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTa                <  2:2629907/128‑1 (MQ=255)

                                                                                                                 agagTTAAT‑‑‑‑GAT‑‑ATATATATATATATATATATATATATATGATATCTATCAGAAAATAATTTTCATATATATATATGATTTTGTATTAAATTTTTATTTTTTATTTATTTTTTATATATTTATTAAtt                  >  2:32780/1‑128 (MQ=255)

                                                                                                                   agatatt‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  1:3699290/122‑1 (MQ=255)

                                                                                                                     agaaT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGAGATCAGCATAAAACGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            <  1:1541155/126‑1 (MQ=255)

                                                                                                                      tAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           >  1:3479661/1‑128 (MQ=255)

                                                                                                                         t‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGAGATCATAATAATATGGATAAATTTAGATCTGATTTTGTATTAAATTTTTAGTTTTTATATATATTTTATATAGTTAATTATTTATAttttaa        >  2:559551/1‑126 (MQ=255)

                                                                                                                            tagagttaatgatatatatatatatatatatatatGCAAGCGATCAGCAT‑AAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            <  2:3777417/117‑1 (MQ=38)

                                                                                                                              gttaatgatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  1:3559340/121‑1 (MQ=255)

                                                                                                                              gttaatgatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  1:2261435/121‑1 (MQ=255)

                                                                                                                              gatatagatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAttt           <  1:3346494/121‑1 (MQ=255)

                                                                                                                                 ttatatatatatttatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTCGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa        <  2:699675/126‑1 (MQ=255)

                                                                                                                                 atatatatatatatatatatatatatatatGCAAGCTATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa        <  1:2333960/126‑1 (MQ=255)

                                                                                                                                   atatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAat      <  2:3662493/128‑1 (MQ=255)

                                                                                                                                    tatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAATTTAATAATTTAGATTTTTAata     >  2:2254897/1‑128 (MQ=255)

                                                                                                                                     atatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATTGTTTATAAAGTTAATAATTTAGATTTTTAatat    >  1:2968590/1‑128 (MQ=255)

                                                                                                                                     atatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTAAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAatat    >  1:1183050/1‑128 (MQ=255)

                                                                                                                                      tatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAtt   >  2:2367192/1‑128 (MQ=255)

                                                                                                                                       atatatatatatatatatatatatGCGCGCGCTCAGGATATTTTGGTGAATTTTTGATCTGAGTTGGTGTTATATTTGTTGTTTTTTTTTATTGTTTATATATTTTATTATTTAGATTTTTAAtttta  >  1:2413763/1‑127 (MQ=255)

                                                                                                                                       atatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATAATATAGATTTTTAATAtta  >  2:1186345/1‑127 (MQ=255)

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.