New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =1835 (0.600)294 (0.120) 129/208 12.6 16.9% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 1378 (0.550)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1000 total aligned reads displayed.

TTTAATAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP016816/311301‑311153
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tat‑‑atatat‑‑a‑‑tat‑‑atatatata‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  CP016816/311148‑311022
                                                                                                                                                                                                                                                                                              
    ATAATTTTTAAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑AT                                                                                                                                                          <  2:653330/128‑1
      AATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGAATTAT‑‑ATAT                                                                                                                                                        >  1:4859783/1‑128
      AATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATAT                                                                                                                                                        >  1:6418999/1‑128
      AATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATAT                                                                                                                                                        >  1:2132823/1‑128
       ATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATA                                                                                                                                                       >  2:5029701/1‑128
       ATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATA                                                                                                                                                       >  2:2518487/1‑128
       ATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATA                                                                                                                                                       >  1:274540/1‑128
        TTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGATTTTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT                                                                                                                                                      >  2:5181348/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAATTAGTATATTTACTATTTTTTTACTTTATAAACGTTTGCTATTATACAATATTATAATTTACATATTTCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  2:5267095/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  1:6541017/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  2:194994/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  2:3541202/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  2:4884835/1‑128
         TTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A                                                                                                                                                   >  1:3554843/1‑128
           TTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTTCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TA                                                                                                                                               >  2:4769148/1‑128
            taAAATTAGTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT                                                                                                                                              <  2:5110044/126‑1
             ttAATTACATTTTTAAATAAAAATATATTTTATTAGTAAATAATTAGTATATTTACTATTTTTTTACTATATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑A                                                                                                                                           <  2:1374743/126‑1
             CAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑A                                                                                                                                           >  2:752907/1‑128
              atATTACTTTTTTAAATAAAATTAGATTTTATTTGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑AT                                                                                                                                          <  2:3113722/126‑1
              AAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑AT                                                                                                                                          >  1:1876587/1‑128
              AAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑AT                                                                                                                                          <  1:2933060/128‑1
              AAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑AT                                                                                                                                          <  1:5543837/128‑1
               AATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATA                                                                                                                                         >  1:5127125/1‑128
               AATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATA                                                                                                                                         >  1:4831038/1‑128
                 TTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATA                                                                                                                                       <  1:2393844/128‑1
                  TACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATAT                                                                                                                                      >  1:333321/1‑128
                  TACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACAATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATAT                                                                                                                                      >  1:1000211/1‑128
                   acaTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATA                                                                                                                                     <  1:1773899/125‑1
                   aaTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATAACATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATA                                                                                                                                     <  1:4022554/126‑1
                   ACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATA                                                                                                                                     >  1:5704091/1‑128
                    aTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACTGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    <  1:4445091/127‑1
                    CTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    >  2:668182/1‑128
                    CTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    >  1:797278/1‑128
                    CTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTAATATTTTTTTAATTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    <  2:5832277/128‑1
                    CTTTTTTAAATAAAAATAGATTTTATTAGTAAATAACTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATAGCAATAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    <  1:4344543/128‑1
                     TTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAAAGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA                                                                                                                                   >  1:3672329/1‑128
                                   ATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTA                                                                                                                   >  1:5799269/1‑128
                                     AGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATTAATGTATTTTATA                                                                                                                 >  2:5375780/1‑128
                                         TTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATG                                                                                                             <  1:603303/128‑1
                                          TTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑T‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATTAATGTATGTTATATATGTTT                                                                                                          >  2:118527/1‑128
                                              TAGTAAATCATTAGTATATTTACTATTTTTTTTATTTATAAAATGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTG                                                                                                        <  2:4946162/128‑1
                                              TAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATATACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTG                                                                                                        <  1:2476318/128‑1
                                               AGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATATAAA‑‑TAT‑‑ATATATATA‑‑ATTAATATATTTTATATATtattt                                                                                                         >  2:1286818/1‑123
                                                  AAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATTAATTTATGTTATATATTTTTTGActa                                                                                                    >  2:6154164/1‑125
                                                         TAGTATTTTTAATATTTTTTTACTTTATAAAATGTTGCTATTATACCATATTTTCATTTATATATTGAATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTA                                                                                             <  2:6275666/128‑1
                                                             ATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATTTATGTTATATATGTTTTGAATCTTATTTAACAA                                                                                         >  2:1505075/1‑128
                                                             ATATTTACTATTTTTTTAATTTATAAACGGTTGCTATTATAACATATTTTCATTTATATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAA                                                                                         <  1:4566151/128‑1
                                                               ATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTTAATCTTATTTAACAAtt                                                                                       >  1:1541052/1‑126
                                                                    CTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATAT                                                                                                                                    >  1:930843/1‑80
                                                                    CTATTTATTTACTTTATAAACGGTTGATATAATAACATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTT                                                                                  <  2:3359815/128‑1
                                                                         TTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCAT‑‑T‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTT                                                                           >  1:1160101/1‑128
                                                                          TTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TATAAATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACTAGTATTTTATTT                                                                              >  1:2610096/1‑128
                                                                          TTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑AAGAATGTATGTTATATATATTTTTAATCATATGTAACAAGaaaatatttttt                                                                            >  2:4433245/1‑116
                                                                                 TTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAG                                                                     >  2:458587/1‑128
                                                                                   ATAAACGGTTGCTATTATACAATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATTTA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGtt                                                                   >  1:120116/1‑126
                                                                                       ACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATTTTATATATGTTTTGAATCTTATATAACAATTATTTTATTTTTTAATAATGGTTGT                                                               >  2:917388/1‑128
                                                                                        ctGTTGCTATTATAACATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTG                                                              <  1:5262301/126‑1
                                                                                        CGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATATTATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTG                                                                <  1:1705945/128‑1
                                                                                          GTTGCTATTATACCATATTTTCTTTTACATATTTCTTTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTA                                                            <  1:5423733/128‑1
                                                                                             ccgtTTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATT                                                                               >  2:1816129/5‑106
                                                                                                  TATAACAAAATTTAATTTAAATATTGAATTATAAATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATTTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGA                                                      <  2:6048771/128‑1
                                                                                                       CATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑ATGTAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAG                                                 <  1:6180240/128‑1
                                                                                                                 TTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATT                                     <  1:5897994/128‑1
                                                                                                                           GCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATTTATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCAT                           <  2:2284998/128‑1
                                                                                                                            ttTTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATT                          <  1:6299732/126‑1
                                                                                                                            CATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATT                          <  1:1944458/128‑1
                                                                                                                             taaAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTT                         <  2:2952563/125‑1
                                                                                                                                 T‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGAT                     <  2:5625315/128‑1
                                                                                                                                 T‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGAT                     <  2:2421037/128‑1
                                                                                                                                 T‑‑ATATAA‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTTTAAAATGAAAAATTTAATTACAATTTTAATTTAATTTatat                     >  2:3623143/1‑124
                                                                                                                                  attTATAT‑‑A‑‑TTT‑‑ATATATATA‑‑ATGATTGTATGTTATATATGTATTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGA                      <  1:4691297/125‑1
                                                                                                                                    ATATTT‑‑A‑‑TAT‑‑ATTTATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATT                    <  1:4138220/128‑1
                                                                                                                                    ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGATTCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATT                    <  1:1363894/128‑1
                                                                                                                                      ATAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATATTATGTAACAAGTATTTTATTTTTTAATAAGTGGTGTGTAAAATTAAAAAGTGAATTACAATTTTAATTTAATTTttatttg                  >  2:2216361/1‑121
                                                                                                                                       TAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGATTGTATGTTATATATGTTTTGAATCTTATGTAACAAGTATTTTATTTTTTAATAAGGTGTGTGTAAAATGAAAAAGTTAATTACAATTTTAATTTCATTTGGATGAGT                 >  1:340760/1‑128
                                                                                                                                       TAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAGATGAAAAAGTCAATTACAATTTTAAGTTCATTTGGATTAGT                 <  1:308269/128‑1
                                                                                                                                       TAT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATCTAACAAGTATTTTATTTTTTAATAAGGGGTGTCTAAAATGAAAAAGTTAATAAAAATTTAAAGTTCTTTTAGATTAtt                 >  2:1595897/1‑126
                                                                                                                                        AT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTTAATCGTATGTAACAAGTATTTTATTTTTTAATAATTTGTGTGTAAAATGAATAATTTAATTTCAATTTTTATTTCATTTTGATTAGTT                >  1:3125523/1‑128
                                                                                                                                        AT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTT                <  2:3028504/128‑1
                                                                                                                                        AT‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAG                  <  2:2130842/126‑1
                                                                                                                                         T‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTA               <  2:3730389/128‑1
                                                                                                                                         T‑‑A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTA               >  2:2771343/1‑128
                                                                                                                                            A‑‑TAT‑‑ATATATATT‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATTTAACAAGTATTTTATTTTTTAATAAGGTGTGTTTAAAATGAAAAAGTTAATTAAAATTTTAATTTCATTTGTATTAGTTtt              >  1:6092926/1‑126
                                                                                                                                            A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTAT              <  2:1701118/128‑1
                                                                                                                                            A‑‑TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTAT              <  1:4929725/128‑1
                                                                                                                                               TAT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATAGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATT             <  1:4230466/128‑1
                                                                                                                                                AT‑‑ATATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGAT                     <  2:4212424/119‑1
                                                                                                                                                    ATATTTATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACA          <  2:4000048/128‑1
                                                                                                                                                     TATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAA         <  2:3238701/128‑1
                                                                                                                                                     TATATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAA         <  1:6643372/128‑1
                                                                                                                                                        ATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCTTATGTAACAAGTATTTTATTTTTTAATAAGTTGTGTGTAAAATGAAAAAGTTAATTACAATTTTAATTTAATTTGGATTAGTTATTACAACTt      >  2:59267/1‑127
                                                                                                                                                        ATATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTG      >  1:2251008/1‑128
                                                                                                                                                          ATA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGTGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTTGATTAGTTATTACAACTGGT    <  2:5511385/128‑1
                                                                                                                                                           TA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTA   <  1:3859858/128‑1
                                                                                                                                                           TA‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTA   <  2:3905865/128‑1
                                                                                                                                                           TA‑‑ATGAATGTATGTTATATATGATTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTA   <  2:428880/128‑1
                                                                                                                                                           TA‑‑ATGAATGGATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTA   <  2:4163176/128‑1
                                                                                                                                                            A‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  2:5747632/128‑1
                                                                                                                                                            A‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  2:2662585/128‑1
                                                                                                                                                            A‑‑ATGAATGTATGTTAGATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  2:6402334/128‑1
                                                                                                                                                                                                                                                                                              
TTTAATAATTTTTCAAATTACTTTTTTAAATAAAAATAGATTTTATTAGTAAATAAGTAGTATATTTACTATTTTTTTACTTTATAAACGGTTGCTATTATACCATATTTTCATTTACATATTGCATTAT‑‑ATATAT‑‑A‑‑TAT‑‑ATATATATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP016816/311301‑311153
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tat‑‑atatat‑‑a‑‑tat‑‑atatatata‑‑ATGAATGTATGTTATATATGTTTTGAATCGTATGTAACAAGTATTTTATTTTTTAATAAGGGGTGTGTAAAATGAAAAAGTTAATTACAATTTTAAGTTCATTTGGATTAGTTATTACAACTGGTAC  <  CP016816/311148‑311022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.