New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 1652671324 (0.620)584 (0.280) 87/250 25.6 30.9% intergenic (+231/‑311) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
?CP016816 165271 = 1305 (0.620)intergenic (+235/‑307) JCVSYN2_00665/JCVSYN2_00670 tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1778 total aligned reads displayed.

CGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAAT‑TTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAATTAAT  >  CP016816/165148‑165399
                                                                                                                             |                                                                                                                                   
   acttttttgttttattaACAAAATTAAAAAATTTTTTTTTTATAATTTTTTTTTATATTTAAATTTTTAAAAAATTAAT‑TTTAAATTTTTAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAata                                                                                                                            <  1:4148445/117‑1 (MQ=255)
     ttttATTAATTATTACTAAAATAAAACTTTTATTTTTTTTGATTTTTTTTTTTTTTTCAAATTTTTAAAAAATTAAT‑TTGTAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATaa                                                                                                                         <  2:4539583/125‑1 (MQ=255)
     ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATTTAAatat                                                                                                                           >  2:3743015/1‑128 (MQ=255)
      tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAAtttaaaaaaa                                                                                                                          >  2:3221322/1‑119 (MQ=255)
      tGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATATaaa                                                                                                                        >  2:3626758/1‑128 (MQ=255)
       ttattaattattaatAAAATAAAAATTTTATTTTTTTATTTATTTTTTTTATATGTAAATTTTTAAAAAATTAAT‑TTTAACTTTTAAAAAA‑‑‑‑‑TTGGTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                                      <  2:1854483/127‑1 (MQ=255)
        tATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATaaa                                                                                                                        >  2:2280530/1‑128 (MQ=255)
          tGAATTTTTAAGAAACTAAAATTATTTTCTTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAAATAAT‑TTTAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAAtt                                                                                                                      <  2:152037/128‑1 (MQ=255)
           gAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATATTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAG‑‑‑ATTTTTTTTTTATTTTTAATTATGTAAATATAAAttta                                                                                                                    >  2:868249/1‑127 (MQ=255)
               tattaataaACTAAAAATATTATATTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAATTTAT‑TTTAACTTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTa                                                                                                              <  2:4279927/125‑1 (MQ=255)
               tAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTA‑TGt                                                                                                               >  1:2186627/1‑128 (MQ=255)
                     gAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAG‑‑‑ATTTTTTTTTTTTTTTTTAAAATTTAAATATAAATTTTA‑ATTAttttt                                                                                                         >  2:3323306/1‑127 (MQ=255)
                      aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAATAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTA‑GGTAtttttt                                                                                                        >  1:3507162/1‑126 (MQ=255)
                      aaactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTA‑GTTAttttt                                                                                                         >  1:1590721/1‑127 (MQ=255)
                       aactaaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAAATAAAAATTTTA‑GTTATtttttt                                                                                                       >  2:2109275/1‑128 (MQ=255)
                        actaaaattaTTATTTTTTTTTTTTTTTTTTGTATATTAAAATTTTTAAAAAATTAAT‑TTTAAATTTTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTttgtt                                                                                                       <  1:3718933/128‑1 (MQ=255)
                          taaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGAAAATATAAATTTTA‑TTTATTTttttgt                                                                                                     >  1:2918008/1‑128 (MQ=255)
                           aaaactaTTATCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATTGAAATATAAATTTTA‑GTTATTTTGTTGTATaa                                                                                                 >  2:3881358/1‑128 (MQ=255)
                            aaaataTTTTTTTTTTATTTATTTTTTTTTAATTCAAATTTTTAAAAAATTAAT‑TTGTAATTTTTAAAAAT‑‑‑‑TTCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTaa                                                                                                 <  1:2611535/128‑1 (MQ=255)
                            aaaataTTTTATTTTTTTATATTTTTTTTATATGAAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTaa                                                                                                 <  2:3163068/128‑1 (MQ=255)
                             aaatattatTTTTTTTTATTTTTTTTTTTAATTCAAATTTTTAAAAAATTAAA‑TTTAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTaa                                                                                                 <  2:382035/125‑1 (MQ=255)
                             aaatattatATTTTTATATTTTTTTTTTATATTAAAATTTTTAAAAAATTAAT‑TTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTaa                                                                                                 <  2:2190935/125‑1 (MQ=255)
                             aaatataatATTTTTATATATTTTTTTTATATTCAAATTTTTAAAAAAATAAT‑TTTTAATTTTAAAAAAATGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTaa                                                                                                 <  2:571800/125‑1 (MQ=255)
                                tattatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAATATAAATTTTA‑TGTATTTTGTTGTCTAAGTAta                                                                                            >  2:1028702/1‑127 (MQ=255)
                                 attatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTT‑TTTATTTTTTTTTATAATTa                                                                                              >  2:2428127/1‑128 (MQ=255)
                                  ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑GTTTTTTTTTTTTTTTTTTAT‑‑TGGATATATAAATTTTA‑TGTNTTTTTTTGTTTatttttg                                                                                            >  1:3649628/1‑122 (MQ=255)
                                  ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAT‑‑TGGAAATATAAATTTTA‑GGTATTTTTTTGTCTAAGTATCt                                                                                           >  1:3878034/1‑128 (MQ=255)
                                  ttatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAAT‑‑‑‑TGATTTTTTTTTTTTTTTTATAATGTAAATATAATTTTTA‑TTTATttttttttaattttatat                                                                                           >  2:2888888/1‑116 (MQ=255)
                                   tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATATC‑TTTTTTTTTTTTTTTT‑‑‑‑TAATGTAAAAATAAAATTTA‑TGTTTTTTTTTTTATAAGTaaaaaa                                                                                         >  1:554524/1‑123 (MQ=255)
                                   tatCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTTAATTAATAAATTTA‑TGTATTTTTTTTTATAATTAtat                                                                                           >  2:1360347/1‑126 (MQ=255)
                                    atatttttATATATTTTTTTTATATTCAAATTTTTAAAAAATTAAT‑TTTAAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTa‑a                                                                                        <  2:4617302/125‑1 (MQ=255)
                                    atCTTTTTAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTA‑GTTATTTTTTTTTATAATTaaata                                                                                          >  2:3562974/1‑124 (MQ=255)
                                        ttttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑TTATTTATATTTTTTTATAATGTAAATATAAAAATTA‑GTTATTTTTTTGTATATGAATATa‑a‑aaaa                                                                                   >  1:2285840/1‑128 (MQ=255)
                                         tttAGATATTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGAAAAAAAAATTTTTA‑GGTATTTTTTTGTCTAATTATCTa‑a‑aaaa                                                                                   >  1:3377642/1‑128 (MQ=255)
                                            tttttttttttttttATTTAAATTTTTAAAAAAATAAT‑TTTTAATTTTAAAAAAT‑‑T‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATa                                                                                <  1:1515367/123‑1 (MQ=255)
                                            ttttatTTTTTTTATATTAAAATTTTTAAAAAAATAAT‑TTTAACTTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAg                                                                               <  1:1000910/125‑1 (MQ=255)
                                             tatatTTTTTTTTTATGCAAATTTTTTAAAAATTTAT‑TTGAACTTGTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAg                                                                               <  2:3457610/127‑1 (MQ=255)
                                              tttttttttttATTTTTAAATTTTTTAAAAATTTAT‑TTTTAATTTTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGaa                                                                             <  2:27738/125‑1 (MQ=255)
                                              atatTTTTTTTATATTAAAAAATTATAAAAAATAATATTTAAATTTAAAAAAATA‑C‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGa                                                                              <  1:473396/128‑1 (MQ=255)
                                                atTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTAAAT‑ATTTAAATTTAAATTTTT‑GGTATTTTTTTGTATAA‑TATATa‑a‑aaaaaattaaaa                                                                           >  2:3990403/1‑121 (MQ=255)
                                                atTTTTTGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAG‑‑ATTTTTTTTTTTTTTTTTTATAATTTAAATATAAATATTA‑TTTATTTTTTTTTATAATTATAaa‑a‑aaaaaaaaaa                                                                             >  1:2697989/1‑123 (MQ=255)
                                                  tttttGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTT‑GTTATTTTTTTTTATAAGTATCTA‑A‑AAAATTAAAAAgg                                                                          >  1:165105/1‑128 (MQ=255)
                                                  tttttGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTTAATTAAAAATTTTA‑TGTATTTTTTTTTTAATATATAAA‑A‑AAAAATAGaaatta                                                                         >  1:4233879/1‑125 (MQ=255)
                                                   ttttGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTA‑TTTATTTTTTTTTATAAGTATATA‑A‑AAAAATATAAAgt                                                                          >  2:2617940/1‑127 (MQ=255)
                                                    tttttatattataaTTTTTAAAAAATTAAT‑TTTAATTTGTAAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGa                                                                         <  1:1159144/116‑1 (MQ=255)
                                                     ttttataTGTAAATTTTTAATAAATTAAT‑TTGAAATTTTTAAAAATAGC‑‑‑TTTTTATTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGaaa                                                                       <  2:4200304/125‑1 (MQ=255)
                                                     ttGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTT‑GTTATTTTTTTTTATAATTAAAAA‑A‑AAAAATAAAAAGaaaa                                                                       >  1:4444934/1‑128 (MQ=255)
                                                     ttGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATTTAAATATAAATTTTA‑GGTATTTTTTTTTATAATTATCTA‑A‑AAAAATATAAAGTaaaaa                                                                     >  2:1454179/1‑128 (MQ=255)
                                                      tGTATATGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATATTGGAAATAAAAATTTTA‑GTTATTTTTTTTTATAAGAATGTA‑A‑AAAAAAATAAAGTaaaa                                                                      >  1:3008999/1‑128 (MQ=255)
                                                       ttaaatataaaTTTTTAAAAAAATAAT‑TTGAAATATTAAAAAAAATC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGaaa                                                                       <  1:3974604/120‑1 (MQ=255)
                                                       gTATTTTCAAATTTTTAAAAATTTATT‑TTGAAATTGTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGaaaaa                                                                     <  1:3573653/128‑1 (MQ=255)
                                                         atatGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTA‑TTTATTTTTTTGTATAAATTAATA‑A‑AAAAAAATAAAATAAAAAat                                                                   >  1:2488678/1‑128 (MQ=255)
                                                         atatGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTA‑GGTTTTTTTTTTTATAAGTTTAAA‑A‑AAAAATATAAAGTAAAAAatt                                                                  >  2:2348633/1‑127 (MQ=255)
                                                          tatGCAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTATAATTTAAATTAAATTTTTT‑GGTATTTTTTATTAAATTTATTTA‑A‑AAAAATATAAAGGaaaaa                                                                     >  1:951777/1‑128 (MQ=255)
                                                          tatGCAAATTTTTAAAAAAATAAA‑TTGAAATTTTAAAAAA‑AAC‑CTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAat                                                                   <  1:3795936/128‑1 (MQ=255)
                                                              cAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTA‑AATGGAAATAAAAATTTAA‑GGTATTTTGTTGGAAAAGTAACTA‑T‑AAAATTACAAAGGAAAAAATATTGt                                                              >  1:3206869/1‑128 (MQ=255)
                                                              cAAATTTTTAAAAAATTAAT‑TTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTA‑GGTATTTTTTTTTCTAAGTATCTA‑A‑AAAAATAGAAAGTAAAAAAAATTGt                                                              >  1:2544544/1‑128 (MQ=255)
                                                                   tttttataaattaat‑tTTATATTTTAAATAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTA‑GGTTTTTTTTTTTCTAAGTATCTA‑A‑AAAAATATAAAGGAAAAAATATTGTTaaaa                                                         <  2:3384708/120‑1 (MQ=255)
                                                                       aaaaaaTTAAT‑ATGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTAAATATAAAAATAATATTTA‑GGTAATTTTTTGTATAAGAAAATA‑A‑AAATAAAAAAAATATAAATTATTTATaaaaat                                                       >  2:1294462/1‑126 (MQ=255)
                                                                            attaat‑tTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTT‑‑‑TAATGGAAAATTAAATTTTT‑GGGATTTTGTGGTCT‑AGTTTGGATA‑AAAAAGACAAAGGTAAAATTTGTTTTAAAAGTAATaaata                                               >  1:4077903/1‑124 (MQ=255)
                                                                            attaat‑tTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAAATTTA‑GGTATTTTGTTATAAAAGTATAAA‑A‑AAAAATATATAGTAAAAAATATTTTTAAAAGTaaaaata                                                >  1:1732151/1‑123 (MQ=255)
                                                                            attaat‑tTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATTTAATTTTTA‑GGTTTTTTGTTGTCTATGTATCTA‑A‑AAAAATAGAAAGTAAAAAATATTGTTAAATGTAATACTa                                                >  2:4454380/1‑128 (MQ=255)
                                                                            attaat‑tTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAATAATGTAAATATAAATTTTA‑TGTATTTTTTTGTATAAATATAAA‑A‑AAAAATATAAAGTAAAAAAAATT‑TTAAAATTaaataata                                               >  1:767832/1‑122 (MQ=255)
                                                                            attaat‑tTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTTTTTTATATGTATATA‑A‑AAAAATTTAATTTAAAAAATATTTTTATAATTAATaatta                                               >  2:1211431/1‑124 (MQ=255)
                                                                             ttaat‑tTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTT‑GTTTTTTTTTTGTCTAATTATCTA‑A‑AAAAATATAAAGTAAAAAATATTTTTAAAAGTAATaat                                                 >  2:437952/1‑126 (MQ=255)
                                                                             ttaat‑tTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTTA‑TTTATTTTTTTGTAAAATTAAATA‑A‑AAAAATAGAAAGTAAAAAATATTTTAAAAATtaataataa                                               >  1:684502/1‑128 (MQ=255)
                                                                             ttaat‑tTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTA‑GGTATTTTTTTTTCTATTTATCTA‑A‑AAAAATATAAAGTAATAAATATTTTTAAAAGTTAtaataa                                               >  2:525165/1‑128 (MQ=255)
                                                                             ttaat‑tTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTA‑GGTATTTTGTTTTATAATTATATA‑A‑AAAAATAGAATGTAAAAAATATTTTTAAAATTAATAATaaa                                              >  2:2680190/1‑128 (MQ=255)
                                                                                at‑tTTAACTTGTAAAAAATA‑‑‑‑TGTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAatt                                           <  1:4295794/128‑1 (MQ=255)
                                                                                      taattGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                       <  1:4357912/125‑1 (MQ=255)
                                                                                      aaatttttaaaaaTAGA‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAattat                                         <  1:868748/120‑1 (MQ=255)
                                                                                      aaCTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTA‑GGTTTTTTTTTTTATATTTATATA‑A‑AAAAATAAAAAGTAAAAAATATTTTTAAAATTAATATAAAAATTAttt                                       >  1:1239764/1‑128 (MQ=255)
                                                                                       aCTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTT‑‑‑TAATGGATATATAATTTTTT‑GGTTTTTTGGTGGGTAAGTATGGA‑ATAAAATTAGAATGATAAATATTTTGTT‑ATAGTAATATTATAAtttttttt                                     >  1:1055048/1‑126 (MQ=255)
                                                                                        cTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATATTTTAATTA‑ATATTTTATGGAATTTTTTTTTATAATTATCAA‑T‑AAAAATAAAAATGTAAAAATATTTTTTATATTAATTCTAAAAATATTTaaa                                    >  1:2373836/1‑127 (MQ=255)
                                                                                        cTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTA‑GGTATTTTTTTTTAAAATTATCAA‑A‑AAAAATATAAAGTAAAAAAAATTGTTAAAATTAATAAAAAAATTATTTAAt                                    >  1:1418333/1‑128 (MQ=255)
                                                                                        atatttttaaaTATA‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                                       <  1:134232/120‑1 (MQ=255)
                                                                                          tGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTAAAAAAAAAATTTTT‑GTTTTTTTTTTTTAAAATTATAAA‑A‑AAAAAAAAAAATAAAAAAATTTTTTTAAATATAATAAAAAATTTTTTTAAt                                    >  1:1811184/1‑128 (MQ=255)
                                                                                              taataatttttttttttttttttttttttATAATGTAAATATATATTTTA‑GGTATTTTGTTTTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGt                                  <  1:1990212/118‑1 (MQ=255)
                                                                                               aaaaTAGC‑‑‑TTTTTTTTTTTTTTTTAATAATGAAAATTTAATTTTTT‑GGTTTTTTTTTTGATTTTTTTAAA‑A‑AAAAAAAAAAAGGAAAAATATTTTTTAAAATTAATATAAAAATTAttaaatttaaat                              >  2:1135464/1‑128 (MQ=255)
                                                                                                    aaatagcttttttttttttttttATAATGGAAATATAAATTTTA‑GTTATTTTTTTGTATAATTATATA‑A‑AAAATTTAAAATTAAAAAATATTTTTATAATTAATAATAAAATTATTTATTtttattta                            >  2:166346/8‑128 (MQ=255)
                                                                                                      tagcttttttttttttttttttTAATGTAAATATAATTTTTA‑AGTATTTTGTGGAGTAAGTATATA‑A‑AAAAATATAAAGGAAAAAATATTTTTAAAAGAAATACAAAAATTAATTAATTTTAATTaaa                          >  2:3086469/5‑128 (MQ=255)
                                                                                                          tttttttttttttttttATAATGGAAATATAAATTTTA‑GTTATTTTGTTTTCAAATTAAATA‑A‑AAAAAAATAAAGAAAAAAATATTTTTAAAATTAATAATAAAATATTTAAATTTTATTTaaaaata                      >  1:2805879/1‑125 (MQ=255)
                                                                                                          tttttttttttttttttATAATGGAAATATAAATTTTA‑GGTATTTTTTTGTATAAGTATATA‑A‑AAAAATATAAAGGAAAAAATATTTTTAAAATTAATAATAAAATTATTTAATTTTAATTAAAAAtt                      >  2:4142913/1‑128 (MQ=255)
                                                                                                            ttttttttttttttttTAATGGAAATAAAAATTTTA‑GGTATTTTGTTGACTAATTATCAA‑A‑AAAAATATAAATGAAAAAATATTTTTAAATTTAATAAAAAAATTATTAAATTTAATTTAAAACTaaa                    >  2:2998983/1‑128 (MQ=255)
                                                                                                            tttttttttttttttATAATGGAAATATAAATTTTA‑GTTTTTTTGTTGTCTAATAATATA‑A‑AAAAATAGAAATGAAAAAATATTGTTAAATTTTTAAATAAAATTTTTTAATTTTATTTAAAACTtaa                    >  1:2426151/1‑128 (MQ=255)
                                                                                                             ttttttttttttttATAATTGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaa                   <  2:1594846/128‑1 (MQ=255)
                                                                                                             ttttttttttttttATAATGGATATATAAATTTTA‑GGTATTTTTTTGTATATTTTTATA‑A‑AAAAATATAAATAAAAAAATTTTTTTAAAATTAATAATAAAATAATTTAATTTTaattaaaaattaaa                   >  2:1747518/1‑128 (MQ=255)
                                                                                                              tttttttttttttATAATGGAAATATAAATTTTA‑GGTTTTTTGTTGTCTAATTATCTA‑A‑AAAAATATAAAGGAAAAAATTTTGTTAAAATTATAAATAAAATTATTTAATGTTAATTAAAaaataaat                  >  1:3119555/1‑128 (MQ=255)
                                                                                                               ttttttttttttATAATGGAAATAAAAATTTTA‑GGTATTTTGTTGTCTAAGTTTATA‑A‑AAAAATATAAATGAAAAATTATTTTTAAAATTAATACTTAATTTATTTAATTTTAATTAAAAATtaaata                 >  1:3300422/1‑128 (MQ=255)
                                                                                                                tttttttttttATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTtaaataa                <  2:640679/128‑1 (MQ=255)
                                                                                                                tttttttttttATAATGGAAATAAAAATTTTA‑GGTATTTTTTTTTATATGTTTATA‑A‑AAAAATATAAAGTAAAAAATATTTTTAAAATTAAAAATATAATTTTTTAATGTTAATATAAAAttaattaa                >  2:1941397/1‑128 (MQ=255)
                                                                                                                  tttttttttATTATTGAAATATAAATTTTA‑TGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAATGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATaaaa              <  1:4545050/128‑1 (MQ=255)
                                                                                                                   ttttttttATAATTGAAATATAAATTTTA‑GGTATTTTGTTGTATAAGTATATA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAAc             <  2:2532406/128‑1 (MQ=255)
                                                                                                                   ttttttttATAATGGAAATATAAATTTTA‑GGTATTTTTTTGTATAATTATATA‑A‑AAAAATATAAAGGAAAAAATATTTTTAAAATTAATAAAAAATTTATTTAATTTTATTTAAAAAtaaaataaaaa             >  2:4075789/1‑127 (MQ=255)
                                                                                                                    tttttttATAATGTAAATATAAATTTTA‑GGTATTTTGTTGTATAAGTATATA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACa            <  2:929471/128‑1 (MQ=255)
                                                                                                                    tttttttATAATGGAAATAAAAATTTTA‑GGTATTTTGTTGTCTAAGTTTCTA‑A‑AAAAATATAAAGGAAAAAATATTTTTAAAATTAATAATAAAATTATTTAATGTTAATTAAAAAATAAATaaaaaa            >  2:742905/1‑126 (MQ=255)
                                                                                                                       ttttATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTATAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaa         <  1:2083818/128‑1 (MQ=255)
                                                                                                                         ttATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATaaaa       <  2:2016246/128‑1 (MQ=255)
                                                                                                                          tataATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAAt      <  2:368370/128‑1 (MQ=255)
                                                                                                                            taATGGAAATATAAATTTTA‑GGTATTTTGTTGTATAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAATta    <  1:1874055/128‑1 (MQ=255)
                                                                                                                             |                                                                                                                                   
CGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGATATTTTTTGTATATGCAAATTTTAAAAGAATTAAT‑TTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTA‑GGTATTTTGTTGTCTAAGTATCTA‑A‑AAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTAAATAAAACATAAAATTAAT  >  CP016816/165148‑165399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.