New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =1143 (0.540)366 (0.210) 120/204 13.4 30.1% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 776 (0.450)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 1461 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012
                                                                                                                                    |                                                                                                                               
   aTTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatat                                                                                                                              >  1:2744661/1‑128 (MQ=255)
   aTTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatat                                                                                                                              >  2:75318/1‑128 (MQ=255)
    caactacaaaaatAAGTTTCATTTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCAATATTACCTATAGAGTTAATG‑‑‑‑atatatat                                                                                                                              >  2:1139625/13‑128 (MQ=255)
      tttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAATG‑‑‑‑atatatatata                                                                                                                           >  2:2569606/1‑128 (MQ=255)
       ttGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatat                                                                                                                          >  2:3276964/1‑128 (MQ=255)
        tGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatata                                                                                                                         <  2:1411539/128‑1 (MQ=255)
         gTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatat                                                                                                                        >  2:3417465/1‑128 (MQ=255)
           aGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑atatatatatatatat                                                                                                                      <  2:220703/128‑1 (MQ=255)
             ttGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatat                                                                                                                    <  1:198716/128‑1 (MQ=255)
              tGTAATTTTAA‑TTTTTATTATATATTATAAATAAAAATTGTATTTTTAAAATATATATTTTATTAAATGATGAAAATCAAAAACCTCCATATTACATATAGAGTTAATt‑‑‑‑atatatatatatatatata                                                                                                                   <  1:775085/128‑1 (MQ=255)
              tGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatata                                                                                                                   >  2:3760589/1‑128 (MQ=255)
               gTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAATATAAATATTTTACGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatat                                                                                                                  >  1:481593/1‑128 (MQ=255)
               gTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatat                                                                                                                  >  2:3336875/1‑128 (MQ=255)
                ttattattttttttttATAAAAATTAGATATAAAAAATTTATATTTAAAATATATATATTATTAAATTAATAAAACATAAAAACTCAATATAAACTATATAGATAATG‑‑‑‑atatatatatatatatatat                                                                                                                  <  1:968020/118‑1 (MQ=255)
                tAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatata                                                                                                                 <  2:1576901/128‑1 (MQ=255)
                  aGTTTTA‑TTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatata                                                                                                               <  1:3901978/128‑1 (MQ=255)
                   ttttAA‑TTTTTAAAAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGACGCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑atatatatatatatatatatatat                                                                                                              <  1:4024628/127‑1 (MQ=255)
                    tttCA‑TTTTTAATAAATATTATAAATAAAAAATGTAATTTTAAAATAAATATTTTAGGAAAAGAAGCTAAGCAAAAACCTCCATATTACCAATAGAGTTAATG‑‑‑‑atatatatatatatatatatatcat                                                                                                             <  1:1062299/128‑4 (MQ=255)
                    tttCA‑TTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatata                                                                                                             <  1:381768/128‑1 (MQ=255)
                    tttCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGATGCAAAGCAAAAACCTCCATATTACATATATAGTTAATG‑‑‑‑atatatatatatatatatatattat                                                                                                             >  1:2148298/1‑125 (MQ=255)
                    gtgtcttttttAATAAATATAATATATAAAAATTGTGTTTTTTTAATATCTATTTTATGTGATGAAGCACACCACAAACCGCCATATATCCTCTAGAGTGATTG‑‑‑‑agatatatatatatatatatatat                                                                                                              <  2:2919917/122‑1 (MQ=255)
                     ttCA‑TTTTTAATAAATATTTGAAATTAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatat                                                                                                            <  2:2748681/128‑1 (MQ=255)
                        a‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatgcaag                                                                                                         <  2:3937565/128‑6 (MQ=255)
                         ttttttAAAATATATTATAAAAATAAATATTATTTTTAAAAAAAATATTTTATAACAAGAACAACACCAAAAAACTCGATATAATCTATAGAGTAAATT‑‑‑‑atatatatatatatatatatatatgcaag                                                                                                         <  1:3038887/127‑6 (MQ=255)
                           ttttAATATATATTATAAATATAAATTTTATTTTTAAAATAAATATTTTATTTTATTAATAAAATAAAAAAACTCCATATTATATATAGAGTTAATT‑‑‑‑atatatatatatatatatatatatatatata                                                                                                       <  1:2678574/128‑4 (MQ=255)
                           attttATAAAAATTAGAAATAAAAAATGTATTTTTAAAAAAAATATATTTTTACATTAACACAAAAAAAAACATCCCAATTACATCTAGAGTGAATC‑‑‑‑atatatatatatatatatatatatgcaagcg                                                                                                       <  1:3672722/127‑8 (MQ=255)
                            tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatgcaagcga                                                                                                      >  1:88459/1‑120 (MQ=255)
                             ttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatgcaagcgat                                                                                                     >  2:2999443/1‑119 (MQ=255)
                             ttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatatgcaagcg                                                                                                     <  1:3561560/128‑8 (MQ=255)
                               aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatatgcaagcgct                                                                                                   >  1:446048/1‑119 (MQ=255)
                                atatatatTATATATAAAAATTTTTTTTTTATAATATATATTTTATTTAATTTAGCAAATCAAAAACCTCCATATTAACTATAGAGATAAAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGa                                                                                                  <  1:3230279/128‑1 (MQ=255)
                                ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatatatatatatatgcaatctatcat                                                                                                  >  1:1879277/1‑116 (MQ=255)
                                  aaataTTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAACCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                            <  2:2469942/128‑1 (MQ=255)
                                  aaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                            <  2:1227788/128‑1 (MQ=255)
                                      atTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATTAATAAAATAAAAAACATCAATATTAAATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCa                                                                                            <  1:438725/128‑1 (MQ=255)
                                       ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                         <  2:43233/128‑1 (MQ=255)
                                            aaTAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATAT‑T‑TATATATATATATATATGCAAGCGATCAGCATAAAATgg                                                                                    <  1:691262/128‑1 (MQ=255)
                                            aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCCGCATAAAATgg                                                                                    >  2:3043430/1‑128 (MQ=255)
                                             aaaaaaaaTTTATTTTTAAAATAAATATTTTATTATATTAAGAAAATCAAAAACCTAAATAATTACTATATAGTTAATGATATATATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                         <  1:138114/126‑1 (MQ=255)
                                                aaaaTTGTTTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                                  <  2:4133226/128‑1 (MQ=255)
                                                    ttttATTTTTAAAATAAATATTTTATGAAATTAAGCTAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAttt                                                                            <  1:1711062/125‑1 (MQ=255)
                                                      gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑atatatatatatat                                                                                                                        <  1:594228/84‑1 (MQ=255)
                                                      gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                          >  1:426805/1‑128 (MQ=255)
                                                        aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATA‑A‑ATATATATATATATATATATATGAAAGAGATAAGAATATAATGGTGATATTTTGAt                                                                        >  1:2419664/1‑128 (MQ=255)
                                                           tttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:4530817/128‑1 (MQ=255)
                                                           tttAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAACCTCCATATAACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                     <  2:3554527/128‑1 (MQ=255)
                                                            ttAAAATAAATATTTTAGGAAATGAAGCCAAGCAAATACCTCCATTTTAGCTTTAGAGTTAATG‑‑‑‑AT‑T‑TATATATATATATATATATATATGCAAGCGATCACAACAAATAGGAGAATTTTAGAACttg                                                                    >  1:1191405/1‑126 (MQ=255)
                                                              aaaaTAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCTATCATCATAAAATTGTTAAATTTAGATCTTAGTTg                                                                >  1:3479348/1‑128 (MQ=255)
                                                                 ataaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                           <  2:930267/128‑1 (MQ=255)
                                                                  taaataTTTTAGGAAAACAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtcg                                                                <  1:100263/128‑3 (MQ=255)
                                                                      tatTTTAGGAAATCAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                          <  1:2206104/128‑1 (MQ=255)
                                                                       atTTTAGTAAACGAAGCAAACCAAAAACCTCCATATAAACTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  1:2601174/128‑1 (MQ=255)
                                                                       atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         >  2:3487451/1‑128 (MQ=255)
                                                                       atTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  2:2087407/128‑1 (MQ=255)
                                                                           tAGCAAACGAATCAAAGCAAAAACATCCATATTACCTATATAGATAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  1:3737688/128‑1 (MQ=255)
                                                                             tgAAATGAAGCAAATCAAAAAACTCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                     <  2:4021709/127‑1 (MQ=255)
                                                                              gAAATGAATCAAAGCACAAACCACAATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTg                                                    <  2:2328571/128‑1 (MQ=255)
                                                                              gAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTa                                                  >  2:2162528/1‑128 (MQ=255)
                                                                               aaaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                                   <  2:653071/128‑1 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATTTATATATATATATATATATATATATGAAAGCGATCAGCATATAATGGTGATATTTAGATATTAGTTGGTATTAAATTTGTAg                                                 >  1:3378505/1‑128 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGtt                                               >  2:4452543/1‑128 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTgg                                                               <  2:1998404/108‑1 (MQ=255)
                                                                                 aTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                           >  2:1693515/1‑128 (MQ=255)
                                                                                  tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTGTTAATTTTGTAtttt                                              >  1:2359465/1‑128 (MQ=255)
                                                                                   gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATA‑‑CTAGCGATCATCATAATATTGTGAAATTTAGATATGAGTTGTTATAAAATAAGTAGtttt                                             >  2:2813658/1‑128 (MQ=255)
                                                                                   gAAGCAAAGAAAAAACATCCATATTACCTATAGAGTTATTG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTttta                                           <  1:3153912/128‑1 (MQ=255)
                                                                                      gcaatccaaaAAAATCCATATTACCTATAGAGATAA‑‑‑‑‑‑AGATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                          <  1:1785591/122‑1 (MQ=255)
                                                                                      gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                          <  1:330529/128‑1 (MQ=255)
                                                                                      gcaaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                        <  2:3819001/128‑1 (MQ=255)
                                                                                       cacagctaaAAGCTCGATAGTCCCTAGAGAGATAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttatt                                         <  1:1462643/125‑1 (MQ=255)
                                                                                        aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTTAGTTGGTCTTAAATTTGTATTTtttatat                                        >  2:2268185/1‑126 (MQ=255)
                                                                                        aaagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                        >  2:1485760/1‑112 (MQ=255)
                                                                                         aagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTATTTtttatt                                         >  1:1285947/1‑128 (MQ=255)
                                                                                         aagcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATACATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                     <  1:4175972/128‑1 (MQ=255)
                                                                                          ataaaaaaaATCAATATAACCTATATAGATAATG‑‑‑‑‑‑ATATATATATATATATATATATATCTGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTttatttat                                      <  2:852827/125‑1 (MQ=255)
                                                                                           gcaaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                     >  2:4276693/1‑128 (MQ=255)
                                                                                            caaaAGCCTCCATATTACCTATAGAGTTTATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAATATGGTGATATATAGATCTGAGTTGTTCTTTAATTTGTAGttttttgatatag                                    >  1:4526575/1‑120 (MQ=255)
                                                                                            caaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATAT‑T‑CAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAg                                    >  2:1785591/1‑128 (MQ=255)
                                                                                            caaaAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATATGATTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                                  >  1:2474601/1‑128 (MQ=255)
                                                                                                 cacaccATATGACCAATAGAGTTAATG‑‑‑‑ATA‑ACA‑AAATATATATATATAAATATGCAAGCGATCAGCATAAAATCGTGAAAATTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTtat                               <  1:2936916/124‑1 (MQ=255)
                                                                                                   cTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATAT‑T‑CAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATaa                             <  2:577508/128‑1 (MQ=255)
                                                                                                    tCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCTAGCGATCAGCATAATATTGTGAAATTTAGATCTGAGTGGGTCTTAAATTTTTATTTTTTATTTATAGTTtatata                            >  1:3974510/1‑126 (MQ=255)
                                                                                                     ccATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATAAGAAAGCGATCATCATAAAATTGATATATTTATATCTGAGTTTCTCTTAAATTTATAGTTTTTATATATAGTATATaa                             >  2:106424/1‑128 (MQ=255)
                                                                                                          ttACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATATGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTtaat                      >  1:4591833/1‑128 (MQ=255)
                                                                                                           taacTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                     <  2:503800/125‑1 (MQ=255)
                                                                                                           tACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAATTTTGTAGTTTTTATTTATAGTTTATAAAGttta                       >  1:1526079/1‑126 (MQ=255)
                                                                                                           tACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                     >  2:2693486/1‑128 (MQ=255)
                                                                                                           tACCTATAGAGTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGCATATAATTGTGATATATAGATATGAGTTGGTCTTATATTTTTAGTTTTTATTTATAGTGTTTATATTtaata                     >  2:3215882/1‑128 (MQ=255)
                                                                                                             ccTATAGAGTTAATG‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt                 >  2:1721961/1‑128 (MQ=255)
                                                                                                                   gagTTAATG‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAATTTAATAatatatat             >  2:4190976/1‑128 (MQ=255)
                                                                                                                       gttaatgatatatatatatatatatatatatatatatGCAAGCGATCAGAATAAAATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTTTATTTTTTATTTATATTTTATAAATTTTATAATTTAg               >  2:3696917/10‑128 (MQ=37)
                                                                                                                             taatgatatatatatatatatatatatatatTCAAGAGATCAGAATAAAATGGAGAAATTTAGATATGAGTTGCTATTATATTTGTAGTTTTTATTTATATTTTATAAAGTAAATATTTTAGAtaatt         >  1:1615083/6‑124 (MQ=25)
                                                                                                                             taatgatatatatatatatatatatatatatGCTAGCTATCAGAATAAAATGGTGAAATTTATATATGAGTTTGTCTTAAATTTATAGTTTTTATTTATAGTTTATATTGTATAAAATTTAGAttttt         >  2:1885205/6‑128 (MQ=25)
                                                                                                                              aatgatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTa        <  1:4102118/124‑1 (MQ=255)
                                                                                                                               atgatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa       >  1:2833451/4‑128 (MQ=255)
                                                                                                                                 tatatatatatatatatatatatatatGCAAGCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAata     >  2:1320672/1‑128 (MQ=255)
                                                                                                                                  tgatatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAATTTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAatat    >  2:4607376/3‑128 (MQ=255)
                                                                                                                                  atatatatatatatatatatatatatGAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTTATAATTTAGATTTTTAatat    >  1:2283210/1‑128 (MQ=255)
                                                                                                                                   tatatatatatatatatatatatatGCAAGCGATCACCATAAAATGGTGAAATATATATCTGAGTTTGTCTTAATTTTGTATTTTTTATTTATAGTTTATATATTTAATAATTTAGATTTTTAATAtt   >  1:2076885/1‑128 (MQ=255)
                                                                                                                                    atatatatatatatatatatataaGCAAGCGCTCAGAATAATATGGTGATATTTAGATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATTTATTTAATTTTTTAGATTTTTAATAttt  >  2:2398441/1‑128 (MQ=255)
                                                                                                                                    |                                                                                                                               
CTTATTTTTGTAGTTGTAAGTTTCA‑TTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.