BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	117946 =	2492 (1.170)	100 (0.060)	72/212	25.4	4.6%	intergenic (+67/+792)	JCVSYN2_00460/JCVSYN2_00465	ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
*	?	CP016816	= 117942	2055 (1.150)	100 (0.060)	72/212	25.4	4.6%	intergenic (+63/+796)	JCVSYN2_00460/JCVSYN2_00465	ABC transporter substrate‑binding protein/spermidine/putrescine ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2595 total aligned reads displayed.

AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073

 aaTTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtatta                                                                                                                                >  1:1707690/1‑128 (MQ=255)

        gagaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattat                                                                                                                         >  2:2735409/1‑128 (MQ=255)

         agaagaATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattatt                                                                                                                        <  2:3541745/128‑1 (MQ=255)

           aagaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattat                                                                                                                      <  1:1634418/128‑1 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     <  1:298833/128‑1 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     >  2:404184/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     >  2:1709633/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     <  1:1551998/128‑1 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattatt                                                                                                                     >  1:1845870/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattagtattattatt                                                                                                                     >  1:4170815/1‑128 (MQ=255)

            agaaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAAATTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATAAAAATTTTAAAAAGCAACAAtattattattataatt                                                                                                                     >  2:3382478/1‑128 (MQ=255)

              aaTGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattat                                                                                                                   <  2:1029649/128‑1 (MQ=255)

                tGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattattatta                                                                                                                 <  1:2656886/128‑1 (MQ=255)

                 gAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAgattattattattattagtat                                                                                                                >  1:3889280/1‑128 (MQ=255)

                  aaaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATattattattattattattatt                                                                                                               <  1:2252732/128‑1 (MQ=255)

                   aaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAAtattattattattat                                                                                                                      <  2:397565/120‑1 (MQ=255)

                   aaaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATAttattattattattattatta                                                                                                              >  2:3445685/1‑128 (MQ=255)

                    aaaaaGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCATCAATATTATTATTAGTATCATTattaa                                                                                                             >  1:3034033/1‑128 (MQ=255)

                         gagTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATc                                                                                                        >  2:642538/1‑128 (MQ=255)

                          agTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCa                                                                                                       <  2:4445346/128‑1 (MQ=255)

                           gTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCATGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATAttattattattattattattattaattat                                                                                                      >  1:3552145/1‑120 (MQ=255)

                             aCGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCata                                                                                                 >  1:3384047/1‑128 (MQ=255)

                              cGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCa                                                                                                   <  1:4092497/128‑1 (MQ=255)

                               gtgattaaaaatataaaaataATTATATAATTTTATATGCAATTCCTCAAGGTTTTGCTTTTTTATAAAAATACAAATTTTAAACAGCTTCAATATTTTTATTATTATTATTATTAATTTTCAAGCat                                                                                                  <  1:3740085/123‑1 (MQ=255)

                                agtgTAAAAATAACAAACTAAATATATAATTTTATAAGCAATAACTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACATCAACAATATTATTATTATTATTATTATTAATTATCAAGCata                                                                                                 <  1:789088/125‑1 (MQ=255)

                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAATATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCata                                                                                                 >  1:878513/1‑128 (MQ=255)

                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTAt                                                                                                         >  2:3040272/1‑120 (MQ=255)

                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCata                                                                                                 <  2:4232072/128‑1 (MQ=255)

                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCat                                                                                                  >  2:2956984/1‑127 (MQ=255)

                                agagTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTAAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCata                                                                                                 <  1:2488408/128‑1 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               >  2:714315/1‑128 (MQ=255)

                                  agTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCAtata                                                                                               <  1:1471346/128‑1 (MQ=255)

                                         ataaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTaa                                                                                        <  1:13121/128‑1 (MQ=255)

                                          taaaaaACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAat                                                                                       <  2:1628557/128‑1 (MQ=255)

                                           aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAata                                                                                      <  1:34506/128‑1 (MQ=255)

                                           aaaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGC‑TTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAatat                                                                                     <  1:3797055/128‑1 (MQ=255)

                                            aaaaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAatat                                                                                     <  1:2829283/128‑1 (MQ=255)

                                              aaaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGa                                                                                   <  1:1087813/128‑1 (MQ=255)

                                               aaCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                                  <  2:1537969/128‑1 (MQ=255)

                                               aaCTAAATAAATAATTTTATAAGAAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGat                                                                                  <  2:1814315/128‑1 (MQ=255)

                                                aCTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGata                                                                                 <  2:3640379/128‑1 (MQ=255)

                                                  taaataaaTAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                               >  1:444902/1‑128 (MQ=255)

                                                  taaataaaTAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                               >  2:3124597/1‑128 (MQ=255)

                                                  taaataaaTAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATATTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGAtata                                                                               <  1:3227561/128‑1 (MQ=255)

                                                    aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                             >  1:202005/1‑128 (MQ=255)

                                                    aataaataATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATAcc                                                                             >  2:267231/1‑128 (MQ=255)

                                                     ataaataaTTTTATAAGCAATACATCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAATTTTAATATGATATACCt                                                                            >  2:2561462/1‑128 (MQ=255)

                                                        aataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtt                                                                         >  2:504515/1‑128 (MQ=255)

                                                         ataatTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAttt                                                                        >  2:2461772/1‑128 (MQ=255)

                                                          aaatTTAATAACCAATACCTCAAGGAATTGCTTTATTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTAtttt                                                                       <  1:4610714/127‑1 (MQ=255)

                                                               ttATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTg                                                                  >  1:509183/1‑128 (MQ=255)

                                                                  taAGCAATAACTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGAtt                                                               <  2:3223793/128‑1 (MQ=255)

                                                                   aaGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTa                                                              >  1:2907028/1‑128 (MQ=255)

                                                                    aGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGTTGATTaa                                                             >  1:3314822/1‑128 (MQ=255)

                                                                      cAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        >  2:3895223/1‑128 (MQ=255)

                                                                       aaTACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAAt                                                          <  1:2749119/128‑1 (MQ=255)

                                                                         taacTCAAGGTATTTCTTTTTTATAAAAATAATAATTTTAAACAGAAACTATATAATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        <  2:798190/125‑1 (MQ=255)

                                                                         tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCTATCATATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGa                                                        >  2:1903056/1‑128 (MQ=255)

                                                                         tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        >  1:2115550/1‑128 (MQ=255)

                                                                         tACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGa                                                        >  2:202361/1‑128 (MQ=255)

                                                                            cttgaGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTATTATGATATTCATATTTTAGGTGATTAAAATGaaaa                                                     >  2:451336/5‑128 (MQ=255)

                                                                            cTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACATCAACAA‑‑‑TATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACg                                                  <  2:564864/128‑1 (MQ=255)

                                                                             tCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGaaaaa                                                    >  1:233309/1‑128 (MQ=255)

                                                                              cAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCTTATAAATTTAATATGATATACCTATTTTAGTTGATTAAAATGAAAAAc                                                   >  2:4598408/1‑128 (MQ=255)

                                                                              cAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAAc                                                   <  2:1262271/128‑1 (MQ=255)

                                                                                aGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGa                                                 >  1:4523868/1‑128 (MQ=255)

                                                                                 ggTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAg                                                <  2:3308856/128‑1 (MQ=255)

                                                                                  gTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGt                                               <  2:2109775/128‑1 (MQ=255)

                                                                                   tATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAA‑‑‑TATTATTATTATTATTATTAATTATCTAGCATATAAATTTAATATGATATACCTATTATAGTTGATTATAAATAAAAACTATTTTTa                                           >  2:2297413/1‑128 (MQ=255)

                                                                                    aTTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAATACGAGttt                                             >  1:736471/1‑128 (MQ=255)

                                                                                        cTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCTAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                         <  2:1343180/128‑1 (MQ=255)

                                                                                        cTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                         <  1:1383214/128‑1 (MQ=255)

                                                                                        cTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAat                                         >  1:1236243/1‑128 (MQ=255)

                                                                                         ttttttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGAGATTAAAATGAAATACGAGATTTAata                                        >  1:3627370/1‑128 (MQ=255)

                                                                                          tttttATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAatat                                       >  1:588397/1‑128 (MQ=255)

                                                                                               ataAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGa                                  <  1:3994455/128‑1 (MQ=255)

                                                                                                  aaaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAATAttt                               >  1:2179927/1‑128 (MQ=255)

                                                                                                   aaaTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATATTAGGTGATTAAAATGAAAAACTAGTTTTAATATAAAGATTTa                              >  1:3136773/1‑128 (MQ=255)

                                                                                                     aTACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTaaa                            <  1:256366/128‑1 (MQ=255)

                                                                                                      tACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTATAATGAAAAAAGAGTTTTAATATAAATAATTaaaa                           >  2:866303/1‑128 (MQ=255)

                                                                                                        cAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaaca                         >  2:289492/1‑128 (MQ=255)

                                                                                                         aaaTTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaacaa                        >  2:2204525/1‑128 (MQ=255)

                                                                                                         aaaTTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAaacaa                        >  2:4310352/1‑128 (MQ=255)

                                                                                                           aTTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAacaaca                      >  2:38016/1‑128 (MQ=255)

                                                                                                           aTTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAacaaca                      <  1:4346735/128‑1 (MQ=255)

                                                                                                            ttttAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAAcaacaa                     <  2:3734530/128‑1 (MQ=255)

                                                                                                             tttAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAg                    <  2:1122601/128‑1 (MQ=255)

                                                                                                               tAAACAGCAACAATAATATTATTAATATTATTATTAATTATCAAGCATCTAAATTAAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTAAAAACAACAAGCt                  <  1:942094/128‑1 (MQ=255)

                                                                                                                    aGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAAAAAGCTGAGAc             >  1:4294886/1‑128 (MQ=255)

                                                                                                                     gCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACt            >  2:4140938/1‑128 (MQ=255)

                                                                                                                       aacaaTATTATTATTATTATTATTATTAATTATCAAGCATATATATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          >  1:1926974/1‑128 (MQ=255)

                                                                                                                       aacaaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACtat          <  1:676462/128‑1 (MQ=255)

                                                                                                                         caaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTatat        <  2:4381304/128‑1 (MQ=255)

                                                                                                                          aaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt       <  2:2801327/128‑1 (MQ=255)

                                                                                                                          aaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt       <  1:2417183/128‑1 (MQ=255)

                                                                                                                          aaTATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATAtt       <  2:2373510/128‑1 (MQ=255)

                                                                                                                             attattattattattattattAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTTATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaa    <  2:1454882/128‑1 (MQ=255)

                                                                                                                              ttattattattattattattaATTATCAAGCATATAAAATTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaaa   <  2:1203528/128‑1 (MQ=255)

                                                                                                                              ttattattattattattaataAATATCAAGCATATAAATTTAATATGATATACCTATTATAGTTGATTAAAATGAAAAACGAGTATTAAAATAAAGATTTAAAACAACAAGCTGAAACTATATTTaaa   <  1:1143157/128‑1 (MQ=255)

                                                                                                                               tattattattattattattaATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTaa    >  1:100160/1‑126 (MQ=255)

AAATTGAAGAGAAGAATGAAAAAAAGAGTACGAGAGTAAAAATAAAAAACTAAATAAATAATTTTATAAGCAATACCTCAAGGTATTGCTTTTTTATAAAAATACAAATTTTAAACAGCAACAATATTATTATTATTATTATTATTAATTATCAAGCATATAAATTTAATATGATATACCTATTTTAGGTGATTAAAATGAAAAACGAGTTTTAATATAAAGATTTAAAACAACAAGCTGAAACTATATTTAAAC  >  CP016816/117819‑118073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.