New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 437885 =992 (0.550)83 (0.060) 55/204 53.7 9.7% intergenic (‑189/+233) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
?CP016816 = 437880 741 (0.500)intergenic (‑184/+238) JCVSYN2_01985/JCVSYN2_01990 glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 1081 total aligned reads displayed.

CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012
                                                                                                                                     |                                                                                                                               
     ttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatat                                                                                                                            >  1:131834/1‑128 (MQ=255)
       ttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                          >  2:3331143/1‑128 (MQ=255)
       ttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatat                                                                                                                          >  1:796672/1‑128 (MQ=255)
        tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatata                                                                                                                         >  1:3744482/1‑128 (MQ=255)
           aGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatat                                                                                                                      >  1:394952/1‑128 (MQ=255)
             tcgTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatat                                                                                                                    <  1:1942296/126‑1 (MQ=255)
              tttAAGTTTCTTATTTAATAAATATTATATATAAAAATTTTATTTTTATAAAAAATATTTTATCAAAACTATAAAATCAAAAAACTCCATATTACCTATATAGATAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                                   <  1:747596/126‑1 (MQ=255)
              tttAAGTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatata                                                                                                                   <  1:2352168/126‑1 (MQ=255)
               ttatttttAATTTTTAATATATATTATATATAAAAATTTTATATTTAAAAAAAAAATTTTATTAAATTAATAAAATAAAAAAACTCCATATTTACTATATAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                  <  2:542956/123‑1 (MQ=255)
               ttatgTTTTATTTTTAATAAATATTATATATAAAAATTTTATTTTTATAATAAATATTTTTTGAAATTAATAAAATAAAAAACATCAATATTAAATATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                  <  2:1486343/124‑1 (MQ=255)
               gTAATTTTCTTTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGCAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                  <  2:3628122/128‑1 (MQ=255)
               gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatat                                                                                                                  >  1:2769624/1‑128 (MQ=255)
                 tattttatattttAATAAATATAATAAAAAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                                <  2:1782308/119‑1 (MQ=255)
                 aattttCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatat                                                                                                                <  2:1388864/125‑1 (MQ=255)
                   ttttCATTTTTAATAAATATTATATATAAAAAATGTATTTTTAAAATAAATATTTTATCAAATTAATCAAATAAAAAACATCCAAATTACAAATAGAGATAAA‑‑G‑‑‑‑atatatatatatatatatatatat                                                                                                              <  1:3383535/127‑1 (MQ=255)
                     ttaaTTTTTAAAAAATATAATAAATAAAAATTGTATATTTAAAATAAATATATTAGTAAATCAAGCACATCAAAAACCTCAATATTAACTATAGAGATAAA‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                            <  1:2065972/125‑1 (MQ=255)
                     ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑‑‑atatatatatatatatatatatatat                                                                                                            <  2:2132778/128‑1 (MQ=255)
                      tCATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatata                                                                                                           <  1:2431106/128‑1 (MQ=255)
                       cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatttatatatatatataaatatatat                                                                                                          >  2:2079957/1‑128 (MQ=255)
                       cATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatat                                                                                                          >  2:2795851/1‑128 (MQ=255)
                        aTTTTTAATAAATATTATATATATATTTTTTTTTTTTAAAATAAATATTTTATTAATTTATGAAAATATAATACCTATATATTAGCTATAGAGTTATT‑‑G‑‑‑‑atatatatatatatatatatatatatata                                                                                                         <  2:2644003/128‑2 (MQ=255)
                        aTTTTTAATAAATATT‑‑AAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatatacaag                                                                                                       >  2:1552131/1‑124 (MQ=255)
                         attttAATATATATTATAAATAAAAATTGTAATTTTATAATATATATTTTATTAAAATAATAAAATCAAAAAACTCCATATTATATATATAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGc                                                                                                        <  2:3223760/127‑1 (MQ=255)
                          ttttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATAAAAAAACTCAATATTACCTATAGAGTTAAT‑‑T‑‑‑‑atatatatatatatatatatatatatcatta                                                                                                       <  2:3748533/128‑6 (MQ=38)
                           tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCaa                                                                                                      >  2:1859883/1‑128 (MQ=255)
                            ttAATAAATATTAGAAATAAAAATTGTATATTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAg                                                                                                     <  1:2302438/128‑1 (MQ=255)
                             taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑atatatatatatatatatatatatattttatata                                                                                                    >  1:259350/1‑120 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                                   <  2:2985063/128‑1 (MQ=255)
                              aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                                   >  2:8383/1‑128 (MQ=255)
                              aataaataTTAGAAATAAAAAATTTATTTTTAAAATATATATTTTAGTAAATTAATCAAATAAAAAAACTCCATATTATCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCg                                                                                                   <  1:2667351/128‑1 (MQ=255)
                               ataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGC‑AAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGAAcgcgct                                                                                                 >  1:3436631/1‑126 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTTGTAAATGAAGCAAAGAAAAAACATCAATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCa                                                                                               <  1:3507535/128‑1 (MQ=255)
                                    tatTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGCTATCatc                                                                                             >  1:671947/1‑126 (MQ=255)
                                     atTATAAATAATAATATTTTATTTATAATATATATATTAGTATATGAAGAAAAGAAATTACATCCATATTACCTATAGAGTTTAT‑‑G‑‑‑‑‑‑‑T‑TATATATATATATATATATATATGCAAGCGTTCAGCATata                                                                                        <  1:618466/128‑3 (MQ=255)
                                         taaaTAAAAATTTTATTTTTAAAATATATATTTTATTAAATTAATAAAATAAAAAATATATATATTAAATATAGAGTT‑‑T‑‑A‑‑‑‑AGATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAt                                                                                      <  2:3029001/127‑1 (MQ=255)
                                          aaaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATaaaa                                                                                       <  2:1227420/128‑1 (MQ=255)
                                            aTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATATATATATATATATATATATATATATATATGCTAGCGATCAGCATaa                                                                                         >  1:1003664/1‑128 (MQ=255)
                                              aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGAAttagatcgg                                                                                   >  1:3105232/1‑120 (MQ=255)
                                               aatattttattttTTAAATAAATATTTTAGGAAATCAACCAAAGAAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:1663379/125‑1 (MQ=255)
                                                 aaTTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAATCAAAAAACTCAATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:3967687/128‑1 (MQ=255)
                                                   ttttATTTTAAAAATAAATATTATAGGACATGACTCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                              <  2:2026195/125‑1 (MQ=255)
                                                   ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATAAAAGCTATCAGCATAAAATTTTGaa                                                                                >  2:64018/1‑128 (MQ=255)
                                                   ttGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTAAAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATAT‑T‑CAATCGATCAGCATAAAATTGTGAAAtat                                                                            >  2:607515/1‑126 (MQ=255)
                                                    tttATTTTTAAAATAAATATTTTATTAAATTAATCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGTATAAAATGGTGAAAtt                                                                             <  1:1242515/126‑1 (MQ=255)
                                                      tttttttAAAATAAATATTTTATGATATTATTAAAATAAAAAACATCCATATTAAATATAGATTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAtt                                                                             <  2:2923912/126‑1 (MQ=255)
                                                      tATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATACAAGCGATCAGCATAAAATGGTGAAATTTa                                                                           <  1:201552/128‑1 (MQ=255)
                                                       aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAAGAGATCAGCATAAAATGGAGAAATTTAg                                                                          >  1:1741010/1‑128 (MQ=255)
                                                              aaatatatATTTTAGTAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:3882802/128‑1 (MQ=255)
                                                              aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                     <  1:2822081/128‑1 (MQ=255)
                                                              aaataaatATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:3210197/128‑1 (MQ=255)
                                                              aaaaaaatATTTTAGCTAATTAAGAAAATAAAAAAAATCAACATTATCAATTTAGATAAA‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  1:843911/128‑1 (MQ=255)
                                                                ataaataTTTTATTAAATGAATCAAATCAAAAAACAAAATATTACATATATAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAg                                                                   <  2:2851353/128‑1 (MQ=255)
                                                                 tatttatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGt                                                              >  1:568321/5‑128 (MQ=255)
                                                                 taaataTATTAGTAAATGAAGCAAATCAAAAATCTCCATATTAACTATATAGATAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGt                                                                  <  1:3024726/128‑1 (MQ=255)
                                                                  aaataTTTTAGGAAATGAATCAAAGCAAAAAACTACATATTAGCTATAGAGTTAATTAT‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGtt                                                                 <  1:2492221/128‑1 (MQ=255)
                                                                  aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGAAAGCGAGCAGCATAAAATGGTGAAAATTATATCTTAGTTGGTCtt                                                           >  2:1722599/1‑128 (MQ=255)
                                                                   aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAATCTATCATAATAAAATGGTAAATTTTATATAAGAGTTTGt                                                              >  2:486226/1‑128 (MQ=255)
                                                                   aataTTTTAGGAAAAGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTa                                                          <  1:1137111/128‑1 (MQ=255)
                                                                      atTTTATGAAAAGAACAAAAGCAAAAAACTCAAAATAACCTATATAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCtt                                                           <  2:2729592/128‑1 (MQ=255)
                                                                        tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATTGTAATATTTATATCTGAGTTTGTATTat                                                         >  1:3144972/1‑127 (MQ=255)
                                                                        tatacgAAATGAAGCAAAGCAAAAACCCACATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaa                                                         <  2:2289789/123‑1 (MQ=255)
                                                                         ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGATTAAATTTAGATCTGAGTTGGTCTTaaa                                                        >  1:2872076/1‑128 (MQ=255)
                                                                           aGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAAGGTGATATTTAGATCTGAGTTGGTCTTatttttt                                                    >  2:241414/1‑122 (MQ=255)
                                                                               aaTGAAGAAAAGAAAAAAACTCCATATAACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTa                                                  <  2:1449050/128‑1 (MQ=255)
                                                                                aTGAATCAAACAAAAAACCTCAAAATTATCTATAGAGAGTAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAg                                                 <  1:902481/128‑1 (MQ=255)
                                                                                 ttaagctatgcaAAAACCTCGATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                                <  2:196052/126‑1 (MQ=255)
                                                                                 tGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGt                                                >  1:16638/1‑128 (MQ=255)
                                                                                      caaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                       >  2:3379812/1‑128 (MQ=255)
                                                                                         atcaaaAACCTCAATATTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                        <  2:3518956/126‑1 (MQ=255)
                                                                                         acaaaaaaCATCCATAATAACTATAGAGATAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttattt                                        <  2:233597/125‑1 (MQ=255)
                                                                                             aaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATTCAATCGATCATAATAAAATTTTTATATTTAGATCTGAGTTGTTCTAAAATTTTTAGTTTTTATTTATAg                                    >  2:903703/1‑128 (MQ=255)
                                                                                             aaaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                                  <  2:312896/128‑1 (MQ=255)
                                                                                              aaaCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTATATCTGAGTTTGTCTTATATTTGTAGTTTTTATATATAGt                                   >  1:1179674/1‑128 (MQ=255)
                                                                                               aaactatatatTACATATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                                  <  1:430090/121‑1 (MQ=255)
                                                                                               aaactaaatatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                                  <  1:3567553/121‑1 (MQ=255)
                                                                                               aaCCTCCATATTACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAg                                    <  2:1148316/128‑1 (MQ=255)
                                                                                                 ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCGCGCGATCCGCATAAAATTTTGATATTTATATCTCTGTTACTCTAAAATTTGAAGTTTATTTTTATATTTta                                >  2:2513494/1‑128 (MQ=255)
                                                                                                  cTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtat                               >  1:2233864/1‑128 (MQ=255)
                                                                                                   tCCATATAACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                              <  1:3343947/128‑1 (MQ=255)
                                                                                                     cATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGATATTGTATTAAATTTGTAGTTTATATTTATAGTTTATAAAga                          >  1:1089433/1‑127 (MQ=255)
                                                                                                      atatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTTAAATATATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtatatat                           >  1:3656546/1‑125 (MQ=255)
                                                                                                      atatTAACTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                           <  1:1355255/128‑1 (MQ=255)
                                                                                                       tatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGt                          >  1:938567/1‑128 (MQ=255)
                                                                                                       tatTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAga                          >  1:2133572/1‑127 (MQ=255)
                                                                                                        atttcttataGAGTTATT‑‑G‑‑‑‑ATATAT‑T‑TATATATATATATATATATGGAAGCGTTCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  2:1063023/122‑1 (MQ=255)
                                                                                                         ttACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATTTATATTTTATAAAGTta                        >  2:2226926/1‑128 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑GAT‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGtt                         >  2:3833793/1‑128 (MQ=255)
                                                                                                          tACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaa                       <  1:161874/128‑1 (MQ=255)
                                                                                                           aCCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGGTATTATATTTGTAGTTTTTATATATAGTTTATATAGTtaat                      >  2:1587884/1‑128 (MQ=255)
                                                                                                            gcTATAGAGTTAAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGGAAGCGATCAGCATAAAATGGTGAATTTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                     <  1:381748/127‑1 (MQ=255)
                                                                                                                taGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAAttt                 <  1:1834726/128‑1 (MQ=255)
                                                                                                                   agTTTAT‑‑T‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  2:259350/128‑1 (MQ=255)
                                                                                                                   agTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGa              <  1:2969573/128‑1 (MQ=255)
                                                                                                                    gTTTAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAt             <  2:1287670/128‑1 (MQ=255)
                                                                                                                         ttaatgatatatatatatatatatatatatatatatAAAAGCGATCAGCATAAAATGGTTATATTTAGATCTGAGTTTTTCTTAAATTTTTATTTTTTATTTATATTTTATAAAGTTAATAATTTatc              >  1:3247106/9‑126 (MQ=25)
                                                                                                                           agttaattatatatatatatatatatatatatatGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAtt            <  2:3449498/121‑1 (MQ=255)
                                                                                                                            g‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTaa       >  2:748093/1‑128 (MQ=255)
                                                                                                                               aatgatatatatatatatatatatatatatGCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGTTAATAATTTAGATTTTTa        >  2:3708223/5‑128 (MQ=255)
                                                                                                                                     atatatatatatatatatatatatGCAATCGATCAGAATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATAttt  <  1:1492931/128‑1 (MQ=255)
                                                                                                                                     atatatatatatatatatatatatGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTATTAAATTTGTAGTTTTTATTTATTGTTTATAAAGTTAATTATTTAGATTTTTAATAttt  >  1:507026/1‑128 (MQ=255)
                                                                                                                                     |                                                                                                                               
CTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAATATTT  >  CP016816/437758‑438012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.