| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 476 (0.340) | 356 (0.200) +ATAT |
83/188 | 35.9 | 36.4% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 673 (0.370) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 406 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGA > 2:762324/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGA > 1:1227420/1‑128GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGA > 2:2196300/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGAT > 2:3537555/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGAT > 2:700471/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGAT > 2:191395/1‑128 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAAGTGTATTTTTTAAATAAATATTTTAGGAAATGAATCAAAGAAAAATCCTCCATATTACATAGAGAGTTTATGATA > 2:1479707/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATAT > 2:3174049/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATAT < 2:2930554/128‑1 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATAT > 2:1667040/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATAT > 1:3328096/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATGATATATATAT > 1:302118/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATAT > 1:131834/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTAGAGAGTTAATGATATATATAT > 1:2439196/1‑128 TTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATA < 2:2095132/128‑1 ctacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTATTGATATATATATAT > 2:513365/10‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATTATATAAATATAT > 2:1383912/1‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATAT > 1:796672/1‑128 tacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAATCAAAAACATCCATATTACCTATAGAGTTAATGATATATATATATA > 1:1646304/9‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAATTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATA > 2:1193887/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATA > 1:3744482/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATA > 1:2303402/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATA > 2:3950516/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATA > 1:312896/1‑128 GTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATAT > 1:3785008/1‑128 tatTTGTTAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCATATTAACTATAGAGTTAATGATATATATATATATA < 2:3856460/125‑1 TAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAACCAAACCAAAAACCTCCATATTACCTATAGAGTTAATTATATATATATATATA < 2:1538500/128‑1 TAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAATGATATATATATATATA > 1:2925055/1‑128 TAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATAAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATA > 2:2647508/1‑128 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATAT > 2:1978589/1‑128 tcGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATAT < 1:1942296/126‑1 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATAT > 1:3293523/1‑128 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATA > 2:3346392/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATAT < 1:3197649/128‑1 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATAT > 2:1582313/1‑128 TAATTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATA < 1:3084833/128‑1 TAATTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAATGATATATATATATATATATATA < 1:3653092/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATA < 2:3717810/128‑1 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATAT < 2:33062/128‑1 agaTTCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATATTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATA < 1:1792275/125‑1 AGTTTCATTTTTTATAAATATTATAAATAAAAATTGTATTTTTATAATAAATATTTTAGTTAATGAAGCTAACCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATA < 2:2470516/128‑1 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATA > 2:2989126/1‑128 AGTTTCATTTTTAATAAATAATAGAAATAAAAATTGTATTTTTGAAATAAATATTTTAGGAAATCAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATA < 1:1673671/128‑1 AGTTTAATTTTTAATAAATATTAGATATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATTAATAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATA < 1:2860529/128‑1 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATAT > 2:3464048/1‑128 GTTTAATTTTTAATATATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGAAAATCAAAAACCTCCATATTAACTATAGAGTTAATGATATATATATATATATATATATAT < 2:2380493/128‑1 aTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATATATATTTTAGGAAATGAATCAAATCAAAAACCTCCATATTACATATAGAGTTAATGATATATATATATATATATATATATA < 2:2822198/127‑1 TTTAATTTTTAATAAATATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATTAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATA < 2:2677621/128‑1 ttaATTTTTAATAAAATTTATAAATAAAAATTTTATTTATAAAATAATTATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTCTAGAGTTAATGATATATATATATATATATATATATAT < 2:1758034/125‑1 TTCATTTTTAAAAAATATTATAAAAAAAAATTTTATTTTTAAAAAAAATATTTTATGAAATCAAGCAAACCAAAAACCTCCATATTACCTATAGAGTTAATCATATATATATATATATATATATATAT < 2:1265100/128‑1 taATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATcattaac < 2:1564260/126‑8 TCATTTTTTATAAATATAAGAAATAAAAATTGTATTTTTAAAATAAATATTTAATGAAATGAATCAAAGCAAAAAACTCCATATAACCTATAGAGATATTGATATATATATATATATATATATATATA < 1:3950982/128‑1 TCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATA > 2:2062695/1‑128 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATTAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAT < 1:185581/128‑1 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAT > 1:571725/1‑128 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAT > 2:2795851/1‑128 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATA < 1:473549/128‑1 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATAcaa > 2:3401675/1‑125 TTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATgcaagcgat < 1:3836701/128‑10 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAaaagata > 1:3896933/1‑121 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATtaaatc > 2:1242515/1‑122 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATAaaaga > 1:831506/1‑123 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCAAATTACCTATAGAGTTAATGATATATATATATATATATATAAATATAcaagcta > 1:1129670/1‑121 aaAAATATAAGAAATAAAAATAGTATTTTTAAAATAAATATTTTATCAAATTAATCAAACCAAAAACCTCCATATTACCTATAGAGATAAAGATATATATATATATATATATATATATATATATatat < 1:2826144/126‑5 ATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGC‑AAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAagctcgctca > 1:3450894/1‑118 TAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTAACTATAGAGTTAAAGATATATATATATATATATATATATATATATgcaagcg < 1:3431348/128‑8 AAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATatatat > 1:2031530/1‑122 aaaATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATAAAAAAACTACATATTAACTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGAT < 1:2105816/125‑1 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCAAATTACCTATAGAGTTAATGAAATATATATATATATATATATATATATATA‑‑CAAGCGAT > 1:3374613/1‑128 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTTGTAAATGAAGCAAAGAAAAAACATCAATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCA < 1:3507535/128‑1 TTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAtc > 2:555917/1‑126 TAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATGAAAGCTATCAG > 2:3633090/1‑128 ATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATGCTAGCGATCAGCATAA > 1:1003664/1‑128 AAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATTCAAGAGATCAAAATAAAATG > 2:1783048/1‑128 AAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGT > 1:1569508/1‑128 AATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATTGTG > 1:2202136/1‑128 TTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATA‑‑AAAGCTATCAGCATAAAATTTTGAA > 2:64018/1‑128 TTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCACGCGCTCAGCATAAATTGTTGAA > 1:2644642/1‑128 TGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATAT > 1:899776/1‑87 TGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATGATATATATATATATAT < 2:899776/87‑1 TATTTTTAAAATATATATTTTAGTATATTAAGCAAATCAAAAACCTCCATATTACATATATAGTTATT‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATT < 1:2360320/128‑1 TTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCTATCAGCATTAAATGGTGATATTTAGA > 1:635775/1‑128 TTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGAAAGCGATCAGCATAAATTGGTGAAATTTAGA > 1:1767181/1‑128 ATAAATAATATATGATAAGAAGCAAAGCACAAACCTCAATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 2:2740311/128‑1 AAATATTTTAGGAAATGAATCAAAGCAAAAAACTACATATTAGCTATAGAGTTAAT‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTT < 1:2492221/128‑1 TTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATA‑‑CAAGCGATCAGCAAAAAATTTATAAATTTATATATGAGTTGGTCT > 2:3757578/1‑128 taatCAAACCAAAAACCTCAATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAG < 2:227239/124‑1 AGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATAT‑T‑CAAGCGCTCAGCATAAAATGGTGAAATTTAGATCTGATTTTGTCTAAATTTTGTAGTT > 2:801810/1‑128 AACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAG < 2:1148316/128‑1 CTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGAAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTTGTCTTAAATTTATATTTTTTATTTATATTTT > 2:3062650/1‑128 TCCATATTACATATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTA < 1:1383912/128‑1 TATTACCTATAGAGTTAATGATATATATATATATATATATATATATAT‑T‑TGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAA < 1:723855/128‑1 TTACCTATAGAGTTAATGATATATATATATATATATATATATATATAT‑T‑AAAGCGCTCAGCATAAAATGGTGAAATATATATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGT > 2:1110684/1‑128 aTATATAGATAATGATATATATATATATATATATATATATATATATGCAAGCGATCATCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTA < 2:1412905/127‑1 GAGTTAATGATATATATATATATATATATATATATATAT‑T‑AAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATATATAGTTTATAAATTTAATAATTT > 1:2786143/1‑128 gAATTATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAG < 2:3687988/127‑1 agtttatTATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGA < 2:259350/121‑1 aatgATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATT < 1:1193887/124‑1 ATATATATATATATATATATATATATATATGCAAGAGATCATCATAAAATGGTTATATTTATATCTGAGTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATAAATATAATAATTTATATTTTTA > 2:620102/1‑128 TATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA < 1:950494/128‑1 |||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |