New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 20248698 (0.050)230 (0.130) 79/252 52.0 67.3% intergenic (+264/‑411) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
?CP016816 202490 = 125 (0.070)intergenic (+268/‑407) JCVSYN2_00840/JCVSYN2_00845 hypothetical protein/lipoprotein
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 230 total aligned reads displayed.

AGTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202359‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615
                                                                                                                                                                                                                                                                       
 GTTAGTTTAAATAATATAGTTAATGTTAATTAAAATACCATAAACTTAAAAATTCTTATAATTTATATCCTCGTTTTCTATTTTTTTATTTGTTTTTCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTA                                                                                                                                  <  2:3869748/128‑1
 GTTAGTGTAAATAATATAGTTAATGTTAATTAAAATACCAAAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTTTTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTA                                                                                                                                  <  2:2985703/128‑1
 GTTAGTGTAAATAATAGTGTTAAGGTTAATTAAAATAACATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAACAATCCCCTTAA                                                                                                                                 <  2:1078830/128‑1
 GTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAAACCCCTTA                                                                                                                                  >  1:3431770/1‑128
  TTAGTTTAAAAAATATAGTTAATGTTAATTAAAATAACATAAACTTAATAATTCTTAAAATGTATATCCTCGTGTTCTATTTTTTTATTTGTTTATATTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAA                                                                                                                                 <  2:17600/128‑1
  TTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAACAATACACTTAAA                                                                                                                                >  2:380043/1‑128
   tatttTAAATAATATATTTAATTTTAATTAAAATACCATAAAATTAATAATTATTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAAT‑‑AAAAAAAAAACAATCCCCTTAAA                                                                                                                                <  2:3855255/123‑1
    AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTATTATTTTTTAATCTTCACAAAT‑‑AAAAAAAAAACAAAACCCTTAAAA                                                                                                                               >  2:2166043/1‑128
    AGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAAAAAACCCATTAAAA                                                                                                                               >  2:2981214/1‑128
     GTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAAAAATCCCCTTAAAAA                                                                                                                              >  1:1628774/1‑128
      TGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTTGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAAACCCCTTAAAAAT                                                                                                                            >  2:3201110/1‑128
       GTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCTCTTTATCTATTTTATTATTATTTTATCTTCACAAAA‑‑AAAAAAAAAACAAAACACTAAAAAAT‑‑A                                                                                                                         >  1:833546/1‑128
         AAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAAACCCCATAAAAAT‑‑AAA                                                                                                                       >  2:2541852/1‑128
          AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTGGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAACAATCCCATTAAAAAT‑‑TAAAA                                                                                                                     >  1:3341020/1‑128
          AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTATATCTTCACAAAT‑‑AAAAAAAAAAAAAATACCATAAAAAattaa                                                                                                                         >  2:3701377/1‑123
          AATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATACTCATGATCTATATTTATATTTGTATATCATCAAAAAT‑‑AAAAAAAAAACAAAACCCATAAAAAT‑‑AAAA                                                                                                                      >  1:3599478/1‑128
           ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCACCTTAAAAAT‑‑AAAAA                                                                                                                     >  2:912992/1‑128
           ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAAT‑‑AAAAAAAAAACAAAAACCTAAAAAAT‑‑AAAAA                                                                                                                     >  1:3073363/1‑128
           ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAA                                                                                                                    >  2:3466995/1‑128
           ATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAA‑‑TAAAA                                                                                                                     >  2:2521526/1‑128
            TAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAAT‑‑AAAAAAAAAAAAATACACTTAAAAAT‑‑TAAAAA                                                                                                                    >  1:2606070/1‑128
             AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCAAAAAT‑‑AAAAAAAAAACAAAACCAATAAAAAT‑‑TAAAAAA                                                                                                                   >  1:3035663/1‑128
             AATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGAGATCTATTTTTTTATTTGATTATCTTCACAAAT‑‑AAAAAAAAAACAATCACCTAAAAAAA‑‑TAAAAAA                                                                                                                   >  1:1966243/1‑128
             AATAGAGTTAAGGTTAATTAAAATACCAAAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATAACAATAAAAAT‑‑TAAAAAA                                                                                                                   >  1:3556713/1‑128
               TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAA                                                                                                                 >  2:3677425/1‑128
               TAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTAATTATTTATTTTTTTATCTTCACAAAT‑‑AAAAAAAAAAAAAAACACAAAAAAAT‑‑AAAAAAAAA                                                                                                                 >  1:942218/1‑128
                AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTAACAAAT‑‑AAAAAAAAAACAAAAAAATTAAAAAT‑‑AAAAAAAAAA                                                                                                                >  1:3559689/1‑128
                AGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTACACAAAT‑‑AAAAAAAAAACAATACCCTTAAAAAT‑‑TAAAAAAAAA                                                                                                                >  2:3632314/1‑128
                    TTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCACCTTAAAAAT‑‑TAAAAAAAAAAAAA                                                                                                            >  2:3500837/1‑128
                      AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATTTAGATCCTCGTGATCTATTTTTTTATTAATTTATCTACAAAAAT‑‑AAAAAAAAAAAAATCAAAATAAAAAT‑‑AAAAAAAAAAAAAAAA                                                                                                          >  2:1910970/1‑128
                      AAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTCACAAAT‑‑AAAAAAAAAACAAACCCATTAAAAAA‑‑TAAAAAAAAAAAAAAA                                                                                                          >  1:3286651/1‑128
                      AAGGTTAATTAAAATACCATAAACTTAATAATTATTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAAAAAAACACAAAAAAAT‑‑TAAAAAAAAAAAAAAA                                                                                                          >  2:487486/1‑128
                       AGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCATTAAAAAA‑‑AAAAAAAAAAAAAAAAA                                                                                                         >  2:499919/1‑128
                        GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAAT‑‑AAAAAAAAAAAAAAAACATTAAAAAA‑‑AAAAAAAAAAAAAAAAAA                                                                                                        >  2:2729753/1‑128
                        GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  2:3538457/1‑128
                        GGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTCTTTATCTTCACAAAT‑‑AAAAAAAAAACAAAACAATTAAAAAT‑‑TAAAAAAAAAAAAAAAAA                                                                                                        >  2:2294659/1‑128
                         GTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATATTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAA                                                                                                       >  2:3143326/1‑128
                           TAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTATTTATTTAACTTCACAAAA‑‑AAAAAAAAAAAAAACCAAAAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAA                                                                                                     >  2:1511183/1‑128
                           TAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAA                                                                                                     >  2:2232916/1‑128
                           TAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTATAATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAAAAATACACATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAA                                                                                                     >  2:1117254/1‑128
                            AATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTTTTTATCTTCACAAATAAAAAAAAAAAAAAAACACCTAAAAAAT‑‑TAAAAAAAAAAAAAAAAAAA                                                                                                      >  2:3684639/1‑128
                             ATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCCTGATCTATTTTTTTATTTGTTTATCTTAACAAAT‑‑AAAAAAAAAACAATAAACTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAta                                                                                                   >  2:1320288/1‑126
                               TAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCTTGATCTATTTTTTTAATTTTTTATCTTCACAAATAAAAAAAAAAAAAATAACCTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAAaaa                                                                                                  >  1:3792918/1‑125
                                AAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCACCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAaaaaa                                                                                                >  2:3049022/1‑123
                                 AAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAAAACCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAAAAAAAA                                                                                               >  1:483045/1‑128
                                 AAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTAACTTCACAAAT‑‑AAAAAAAAAACAATCCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACAAAAA                                                                                               >  2:3257135/1‑128
                                      CCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAATAAAAAAAAAA                                                                                          >  1:3102395/1‑128
                                       CATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATTTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAACAAAAAAAAAAAAca                                                                                         >  2:3361469/1‑126
                                           AACTTAAATATTCTTATAATTTTGATCCTCCTTATATATTTTTTTTTTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTA                                                                                     <  1:2796978/128‑1
                                            aaTTAATAATTATTATAATTTATATCATCTTGATCTATTTTTTTATTTGTTTATATTAAAAAAA‑‑AAAAAAAAAACAATCCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTA                                                                                     <  1:3482799/126‑1
                                                 ATAATTATTATAATTTATATCCAGGTGATCTATTTTTTTATTTTTTTATCTTCAAAAAA‑‑AAAAAAAAAAAAATCCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCT                                                                                <  1:3642137/128‑1
                                                          aaAATGTATATCCACCTTATCTATTTTTTTATTTTTTTATCTTAAAAAA‑‑AAAAAAAAAAAAATCCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCC                                                                      <  1:2273837/126‑1
                                                                    tactagttataTATTTTTTTATTTTTTTATATTCAAAAAA‑‑AAAAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCA                                                            <  1:1190072/117‑1
                                                                          tttttttTTTTTTTTTTTTTTTATATTTAAAAAA‑‑AAAAAAAAAAAAAAACCATTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTT                                                      <  2:833546/121‑1
                                                                          tttttTATTTTTTTATTTTTTTATATTAAAAAAT‑‑AAAAAAAAAAAAATACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:543106/123‑1
                                                                          ttatcttattaTTTATTTTTTTATCTTAACAAAA‑‑AAAAAAAAAAAAAACCCCATAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:3503929/117‑1
                                                                           tataTATTTTTTTATTTTTTTATATAAAAAAAT‑‑AAAAAAAAAACAATACCCATAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTT                                                       <  1:2902958/124‑1
                                                                              aTATTTTTTTATTTGTTTAATTAAAAAAAA‑‑AAAAAAAAAAAAAACCCCTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTT                                                  <  1:3147003/127‑1
                                                                              CTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAAAAAAAAATATTTCTTAAAATTCACTATAATTCCACATTTTATat                                                  >  2:2070198/1‑126
                                                                               aATTTTTATATTTTTTATAATAAAAAAT‑‑AAAAAAAAAACAAACCCCATAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                                 <  1:3354487/127‑1
                                                                                tTTTTTTTATTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAATCACCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTT                                                 <  2:403998/127‑1
                                                                                 TTTTTTTATTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAAAACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:272589/128‑1
                                                                                 TTTTTTTATATTTAATCTTAACAAAA‑‑AAAAAAAAAAAAATACCCTTAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:1115188/128‑1
                                                                                  TTTTTTTTTTTTTTATATTAACAAAAA‑‑AAAAAAAAAAAAATCCCTTAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTT                                                <  1:3297069/128‑1
                                                                                  TTTTTTATTTTTTTATATTAAAAAAT‑‑AAAAAAAAAAAAATACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                               <  2:3824318/128‑1
                                                                                  TTTTTTATTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAAACACATTAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTA                                               <  1:3266110/128‑1
                                                                                     TTTATTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAATACCCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAA                                             <  1:204223/128‑1
                                                                                         TTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAATAACCTTAAAAATTAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAA                                         <  1:1444508/128‑1
                                                                                         TTTTTTTATATTAAAAAAA‑‑AAAAAAAAAAAAAAACACTTAAAAAA‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGA                                       <  2:3035482/128‑1
                                                                                            ttttaaatttACAAAA‑‑AAAAAAAAAATAATACCAATAAAAAT‑‑TAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  2:3789808/118‑1
                                                                                             ttataaaataaaAAAA‑‑AAAAAAAAAAAAAAAAACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATA                                     <  1:2932700/116‑1
                                                                                             TTTATATACTCAAAT‑‑ATAAAAAAAAAAATCCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:3561502/128‑1
                                                                                              taatataaACAAAA‑‑AAAAAAAAAAAAATCCCCTTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  2:3933015/120‑1
                                                                                               ttataataaaAAAA‑‑AAAAAAAAAAAAATAACATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTATAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:3849706/118‑1
                                                                                               TATATTAACAAAT‑‑AAAAAAAAAAAAATCCCCTTAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTG                                  <  2:3269553/128‑1
                                                                                                aataataaaAAAT‑‑AAAAAAAAAAAAAAACCCTTAAAAAATAAAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATT                                   <  1:883658/119‑1
                                                                                                   tatttaAAAT‑‑AAAAAAAAAAAAATACCGATAAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  2:3608838/122‑1
                                                                                                   tattaaAAAA‑‑AAAAAAAAAAAAATACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  1:3901495/122‑1
                                                                                                   attaaaAAAA‑‑AAAAAAAAAAAAATTCCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACA                               <  2:3576826/122‑1
                                                                                                    ttaaaAAAA‑‑AAAAAAAAAAAAATACACTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACAT                              <  2:3099461/123‑1
                                                                                                     taaaAAAA‑‑AAAAAAAAAAAAATCCCATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAAATAAAAACAAACTCTATTTATTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATA                             <  1:1511183/124‑1
                                                                                                      aaaAAAA‑‑AAAAAAAAAAAAAACCCATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAA                            <  1:3246526/125‑1
                                                                                                        aAAAA‑‑AAAAAAAAAAAAATACACATAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATA                          <  1:2011034/127‑1
                                                                                                         AAAT‑‑AAAAAAAAAAAAAAACAATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  1:1857575/128‑1
                                                                                                         AAAA‑‑AAAAAAAAAAAAATCACCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATA                        <  1:686201/128‑1
                                                                                                            T‑‑AAAAAAAAAAAAATACCCTTAAAAAT‑‑‑‑TAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCT                   <  1:3812424/128‑1
                                                                                                             taAAAAAAAAAAAAAAAACATTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATTATATAT                       <  1:1009353/126‑1
                                                                                                              aAAAAAAAAAAAAAAACCCTTAAAAATT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATA                      <  1:414404/127‑1
                                                                                                               AAAAAAAAAAAAATAACTATTAAAAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATC                    <  1:2538954/128‑1
                                                                                                                 AAAAAATAAAATACATTTATAAATAAAAAAAAAAAAAAAAAAAAAACTAAATACAAAGTCTATTTCTTAAAATTACCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATat                   <  2:429111/128‑3
                                                                                                                 AAAAAAAAAAAACCCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTA                  <  2:977206/128‑1
                                                                                                                      AAAAAAACCCTTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA             <  1:2366751/128‑1
                                                                                                                        aaaaaaaaaaaTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATA             <  1:1198350/117‑1
                                                                                                                        ACAAACCCCTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT          <  1:2166043/128‑1
                                                                                                                          aaataaCCTTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATAT          <  1:1417269/122‑1
                                                                                                                             ttaaatTTAAAATT‑‑AAAAAAAAAAAAAAAAAAAAAATAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAA        <  1:97805/122‑1
                                                                                                                             aCCCATTAAAAAA‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAAT       <  1:2510188/127‑1
                                                                                                                              accatTTAAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAAT       <  2:3249041/123‑1
                                                                                                                              CCCATTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATA      <  1:1656462/128‑1
                                                                                                                                  aaTAAAAAT‑‑TAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTA   <  1:2445837/126‑1
                                                                                                                                                                                                                                                                       
AGTTAGTGTAAATAATAGAGTTAAGGTTAATTAAAATACCATAAACTTAATAATTCTTATAATGTAGATCCTCGTGATCTATTTTTTTATTTGTTTATCTTCACAAAT‑‑AAAAAAAAAACAATCCCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP016816/202359‑202486
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAAT‑‑AAAAAAAAAAAAAAAAAAAAACTAAAAACAAACTCTATTTCTTAAAATTCCCTATTATACCACATTTTATTTTTAAAATAAGATATTGACATAATATATATCTAATATATATAATACTAT  >  CP016816/202490‑202615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.