New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2822046 =120 (1.190)14 (0.140) 11/282 8.3 10.5% intergenic (‑35/+93) alaS/recX alanyl‑tRNA synthetase/regulatory protein for RecA
?NC_000913 2822080 = 124 (1.280)intergenic (‑69/+59) alaS/recX alanyl‑tRNA synthetase/regulatory protein for RecA
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 132 total aligned reads displayed.

CTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTCT  >  NC_000913/2821935‑2822226
                                                                                                                                                 |                                                                                                                                                  
ctgGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAAACAAGCTAACGAAATATCGACACCAGCTCCAGCGTGTCTTAACCTCCGGGCTGGTAACt                                                                                                                                                 >  2:288389/1‑149 (MQ=255)
   gaaaCTACCTGATGTCCCGTACTATGGAAAAAGTCGAGAACCGCCTGACGGATCTCCGCGTTGCTCTTGCGCATAATTATCATGAAATCAAGCTAACTAAATATCGCCACCAGCTCCAGCGTGTATTAACCTACGTGCTGGTAACTGaa                                                                                                                                              >  1:74012/3‑149 (MQ=255)
        tACCTGATGTCCCTTACTATGGAAAAAGTCGAGAACCGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTTCCCGCCGGGCTGGTAACTGAAAAGTg                                                                                                                                         >  2:456536/1‑149 (MQ=255)
        tACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                   >  1:644060/1‑139 (MQ=255)
        tACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTaa                                                                                                                                                   <  2:644060/139‑1 (MQ=255)
        tACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTg                                                                                                                                         >  2:43471/1‑149 (MQ=255)
        tACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTg                                                                                                                                         >  1:617584/1‑149 (MQ=255)
          ctttctGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGTCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTggg                                                                                                                                       <  2:1065751/144‑1 (MQ=255)
          ccTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTTTTAACCGCCGGGCTGGTAACTGAAAAGTggg                                                                                                                                       >  1:1292399/1‑149 (MQ=255)
          ccTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTggg                                                                                                                                       <  2:579974/149‑1 (MQ=255)
           cTGATGTCCCTTACTATCGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGa                                                                                                                                      <  1:255975/149‑1 (MQ=255)
             gATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACAAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGaac                                                                                                                                    >  1:1065751/1‑148 (MQ=255)
              aTGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAata                                                                                                                                   <  1:1111602/149‑1 (MQ=255)
              aTGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAata                                                                                                                                   <  1:260013/149‑1 (MQ=255)
                   ccTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCTGCTCCCGCGTGTCTTAACCGCCGGGCGGGTAACTGAAAAGTGGGAataagata                                                                                                                              >  2:1068402/1‑149 (MQ=255)
                   ccTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagata                                                                                                                              >  1:200586/1‑149 (MQ=255)
                    cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCTGTGCTCTAGCTCATAATTATCCTGAAATCAAGCTAACGAAAGATCGCCACCAGCTCCAGCGTGTCGTAACCGCCGGGCTGTTAACTGAAAAGTGGGAataagataa                                                                                                                             >  2:1080841/1‑149 (MQ=255)
                    cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                             >  2:657889/1‑149 (MQ=255)
                    cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGACACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                             <  2:1204255/149‑1 (MQ=255)
                    cTTACTATGGAAAAAGTCGAGAAACGCATGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataa                                                                                                                             >  2:527545/1‑149 (MQ=255)
                     ttACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagataag                                                                                                                            >  1:1151126/1‑149 (MQ=255)
                     ttACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCGCCCGCGTGTCTGATCCGCCGGGCGGGTAACAGAAACGTGGGAataagataag                                                                                                                            >  2:918819/1‑149 (MQ=255)
                      tACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGt                                                                                                                           >  2:1086533/1‑149 (MQ=255)
                      tACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCACCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGt                                                                                                                           <  2:1099394/149‑1 (MQ=255)
                          aTGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataaga                                                                                                                                <  2:707704/140‑1 (MQ=255)
                           tGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCt                                                                                                                      >  2:1483487/1‑149 (MQ=255)
                            ggAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCtt                                                                                                                     <  2:66800/149‑1 (MQ=255)
                             gAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTg                                                                                                                    >  1:1005097/1‑149 (MQ=255)
                              aaaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGa                                                                                                                   >  2:441294/1‑149 (MQ=255)
                                  aGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTgg                                                                                                               <  2:1286278/149‑1 (MQ=255)
                                  aGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTgg                                                                                                               >  1:600486/1‑149 (MQ=255)
                                  aGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTgg                                                                                                               <  1:1121280/149‑1 (MQ=255)
                                       agaAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGt                                                                                                          >  2:1369712/1‑149 (MQ=255)
                                         aaaCGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTaa                                                                                                        >  1:1552364/1‑149 (MQ=255)
                                           aCGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTaaaa                                                                                                      >  1:453542/1‑149 (MQ=255)
                                             gCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATa                                                                                                    >  2:442661/1‑149 (MQ=255)
                                                 gACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGt                                                                                                <  1:1086533/149‑1 (MQ=255)
                                                  aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTa                                                                                               >  1:1043245/1‑149 (MQ=255)
                                                  aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTa                                                                                               >  1:419759/1‑149 (MQ=255)
                                                   cGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTTTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTAt                                                                                              <  2:1292399/149‑1 (MQ=255)
                                                    ggATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATg                                                                                             >  1:818496/1‑149 (MQ=255)
                                                      aTCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCg                                                                                           >  1:732648/1‑149 (MQ=255)
                                                        ctcAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACAGGGAAGTAAAATACCGTATGCGtt                                                                                         <  2:521614/149‑1 (MQ=255)
                                                           aGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAg                                                                                      <  1:1483487/149‑1 (MQ=255)
                                                              ggTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCg                                                                                   >  2:1345495/1‑149 (MQ=255)
                                                                    ctagCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGACTCTCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGTAAGTAAAATACCTTATGCGTTCAGTCGGCaaaa                                                                             >  1:1062536/4‑149 (MQ=255)
                                                                     ttGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAGTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAAt                                                                            >  2:832025/1‑149 (MQ=255)
                                                                     ttGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAAt                                                                            >  2:711351/1‑149 (MQ=255)
                                                                        ctctTAATTATCCTGAAATCAAGCGAACGAAATATCGCCACCCGCTCCAGCGTGGCTTACCCGCCGGGGGGGTAACAGAAAAGTGGGAATAAGAAAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGGTCAGTCGGCCAAAttgc                                                                         >  2:1116145/1‑147 (MQ=255)
                                                                        cTCATAATTATACTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCCGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                                                         <  1:389105/149‑1 (MQ=255)
                                                                         tCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAATTACCGTATGCGTTCAGTCGTCAATATTTCg                                                                        >  2:397056/1‑149 (MQ=255)
                                                                               ttATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAAt                                                                  <  2:714065/149‑1 (MQ=255)
                                                                               ttATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCAGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGATTTCTTGACTGGGAAGTATAATACCGTATGCGTTAAGTCGTCAAAATTTCGACAAAt                                                                  >  1:931101/1‑149 (MQ=255)
                                                                                   ccTGTACTCAAGCTATCGAAATATCGCCACCAGCTCCCGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGCCTGGGAAGTAAAATACCGGATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                                              <  1:1080841/149‑1 (MQ=255)
                                                                                   ccTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                                                              <  2:1151126/149‑1 (MQ=255)
                                                                                     tGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTTAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg                                                            <  2:44352/149‑1 (MQ=255)
                                                                                      gAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTgg                                                           <  2:818496/149‑1 (MQ=255)
                                                                                          tCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGCCTCGGAAGTAAAAAACCGTATTCGTACAGTAGGCAAAATTTCGCCAAATCTCCTTGatat                                                       >  1:881503/1‑149 (MQ=255)
                                                                                            aaGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt                                                     >  1:854495/1‑149 (MQ=255)
                                                                                            aaGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGCAATAAGATAACTTTTCTTGACTGGGAAGTAAAATAACCTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt                                                     >  2:8120/1‑149 (MQ=255)
                                                                                            aaGCTAACGAAATATCGACACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt                                                     <  1:1369712/149‑1 (MQ=255)
                                                                                             aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCtt                                                    <  1:150086/149‑1 (MQ=255)
                                                                                              gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                                                   >  1:344841/1‑149 (MQ=255)
                                                                                                 aaCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCAt                                                <  2:600486/149‑1 (MQ=255)
                                                                                                  aCGAAATATCGCCACCAGTTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc                                               >  1:601129/1‑149 (MQ=255)
                                                                                                  aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc                                               <  2:1552364/149‑1 (MQ=255)
                                                                                                      aaTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGAt                                           <  2:200586/149‑1 (MQ=255)
                                                                                                       atatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATa                                          >  1:1594813/1‑149 (MQ=255)
                                                                                                         atCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGc                                        <  1:713163/149‑1 (MQ=255)
                                                                                                          tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGcc                                       >  1:681145/1‑149 (MQ=255)
                                                                                                          tCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGcc                                       >  2:1082363/1‑149 (MQ=255)
                                                                                                           cGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCa                                      <  1:1624190/149‑1 (MQ=255)
                                                                                                            gcatccaGCTCCAGCGTGTCTTAAACGCCGGGCTGTTAAATTAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAc                                     <  2:931101/145‑1 (MQ=255)
                                                                                                            gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTTACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAAATTCGCCAAATCTCCTGGATATCTTCCATCAGATACCCAc                                     >  2:655489/1‑149 (MQ=255)
                                                                                                            gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAc                                     <  2:1594813/149‑1 (MQ=255)
                                                                                                            gCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCAc                                     <  2:1191247/149‑1 (MQ=255)
                                                                                                             ccaccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACg                                    >  1:1519894/1‑149 (MQ=255)
                                                                                                              caccaGCTCCAGCGTGGCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa                                   <  1:1068402/149‑1 (MQ=255)
                                                                                                                ccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATa                                 >  1:1336065/1‑149 (MQ=255)
                                                                                                                  aGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATaga                               <  1:1345495/149‑1 (MQ=255)
                                                                                                                     tCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCa                            >  1:348859/1‑149 (MQ=255)
                                                                                                                       cAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGa                          >  2:352999/1‑149 (MQ=255)
                                                                                                                       cAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGAGAGAGCAGa                          >  2:1189641/1‑149 (MQ=255)
                                                                                                                             gtCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc                    <  1:1224765/149‑1 (MQ=255)
                                                                                                                             gtCTTAAATGCCGGGATGGTAACTGAAAAGTGTTAATAAGATCAGTTTGCTTGACTGGGAAGTAAAATACCGTATGCGTTCATTCGGCAAAATTTCTCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGc                    <  2:74012/149‑1 (MQ=255)
                                                                                                                              tCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCt                   >  1:936728/1‑149 (MQ=255)
                                                                                                                              tCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCt                   <  1:525288/149‑1 (MQ=255)
                                                                                                                              gcTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTGTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCt                   <  1:456573/148‑1 (MQ=255)
                                                                                                                               cTTAACCGCCGGGCTGGTAACTGAAATGTGGGAATAAGATAAGTTTTCTTGACTGGGACGTAAATTACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTg                  <  2:196524/149‑1 (MQ=255)
                                                                                                                                ttAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTTACTGGGAAGTAACATACCGTATGCGTTCAGTCGGAAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTgg                 >  2:923309/1‑149 (MQ=255)
                                                                                                                                  aaCCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGAt               >  2:187899/1‑149 (MQ=255)
                                                                                                                                     cgccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCATGATAGAGCAGAAACCGCTGGATCtt            >  2:1049611/1‑149 (MQ=255)
                                                                                                                                      gccgGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTa           >  2:470998/1‑149 (MQ=255)
                                                                                                                                        ggagCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAAc         <  2:1102756/146‑1 (MQ=255)
                                                                                                                                             tGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGTAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTACTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACttttt    <  1:288389/149‑1 (MQ=255)
                                                                                                                                              ggTAACTGAAATGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTc   <  2:1555460/149‑1 (MQ=255)
                                                                                                                                              ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTc   <  2:1329026/149‑1 (MQ=255)
                                                                                                                                              ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTc   <  1:644697/149‑1 (MQ=255)
                                                                                                                                              ggTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCAAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTc   <  2:732648/149‑1 (MQ=255)
                                                                                                                                               gTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTCt  <  2:1005097/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
CTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGATAGAGCAGAAAACGCTGGATCTTAACTTTTTCT  >  NC_000913/2821935‑2822226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.