Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,397,381 Δ13,756 bp [ynaJ][ttcA] 15 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1397381 1411136 13756 104 [0] [0] 103 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,ydaM,ydaN,fnrS,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13973800 (0.000)103 (0.910) 76/294 0.4 100% coding (16/258 nt) ynaJ DUF2534 family putative inner membrane protein
?NC_000913 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA s(2)C32 thioltransferase, iron sulfur cluster protein

Only 100 of 103 total aligned reads displayed.

GCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCAC  >  NC_000913/1410994‑1411282
                                                                                                                                               |                                                                                                                                                 
cctaactaatcaatgcgttgattgtaaatccagctacgaggtgaggttttcagcgcagacaaccgtgaactgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCa                                                                                                                                              <  2:1852107‑M2/6‑1 (MQ=255)
  taactaatcaatgcgttgattgtaaatccagctaagaggtgaggttttcagaccagacaagggtgaaatgtcatggtattgttacgtataggtaacaagaaatttgtctgcacaaggattacatcatgataatggcgaaacACTTCAGa                                                                                                                                            >  2:1529683‑M2/142‑149 (MQ=255)
  taactaatcaaagcgttgattgtaaatccagctaagaggtgaggttttcagagaagacaaaggtgaaatgtcattgtattgttacgtttaggtaacaagaaatatgtctgcacaaggattacataatgattatgtcgaaaaAATTCAGa                                                                                                                                            >  1:368544‑M2/142‑149 (MQ=255)
    actaatcaatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAAc                                                                                                                                          >  1:1571046‑M2/140‑149 (MQ=255)
       aatcaatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGt                                                                                                                                       <  1:373449‑M2/13‑1 (MQ=255)
         tcaatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                                                                     >  1:916234‑M2/135‑149 (MQ=255)
         tcaatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                                                                     >  2:836723‑M2/135‑149 (MQ=255)
         tcaatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTgg                                                                                                                                     <  1:836723‑M2/15‑1 (MQ=255)
           aatgcgttgattgtaaatccagcttagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGt                                                                                                                                   >  2:1003605‑M2/133‑149 (MQ=255)
           aatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGt                                                                                                                                   >  2:937207‑M2/133‑149 (MQ=255)
           aatgcgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgataatggcgaaacACTTCAGAACCGTGGGt                                                                                                                                   >  1:429502‑M2/133‑149 (MQ=255)
               cgttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATg                                                                                                                               >  1:989476‑M2/129‑149 (MQ=255)
                gttgattgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGc                                                                                                                              >  2:220349‑M2/128‑149 (MQ=255)
                   gattgtaaatccagctaagaggtcaggttaacagagcacacaacggtgaaatggcattgtaatgtgacggttagggaacaagaaatttgactgcacagggattacatcatgattagggcgaaacACTTCAGAACCGTGGGTGATGCCtt                                                                                                                           <  1:1208108‑M2/25‑1 (MQ=255)
                    tttgtaaatccacctaagagggtaggttttcagagcagactacggtttaatgtcatggtattgttacgtttaggtaacaagaaagttgtctgcacaaggattacatcatgagtctggcgaaacACTTCTGAACCGGGGGTGATGCCttt                                                                                                                          <  2:1021619‑M2/26‑1 (MQ=255)
                    attgtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCttt                                                                                                                          <  1:479673‑M2/26‑1 (MQ=255)
                       gtaaatcccgctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttccgtttaggtaacaagaaatttgtctgaacaaggattaaataatgattttggcgaatcACTGCTGAACCGTGGGTGATGCCTTTGaa                                                                                                                       >  1:1720971‑M2/121‑149 (MQ=255)
                       gtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaa                                                                                                                       >  1:412127‑M2/121‑149 (MQ=255)
                       gtaaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaa                                                                                                                       >  1:1536626‑M2/121‑149 (MQ=255)
                        taaatccagcttagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttagggaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                                                                      <  1:1707149‑M2/30‑1 (MQ=255)
                        taaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgttttggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacTCTTCAGAACCGTGGGTGATGCCTTTGaaa                                                                                                                      <  1:1432906‑M2/30‑1 (MQ=255)
                        taaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaaattgtctgcacaaggattacatcatgcttatggagaaacACTTCAGAACCGTGGGTGAAGCCTTTGaaa                                                                                                                      >  1:1717717‑M2/120‑149 (MQ=255)
                         aaatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCATAACCGTGGGTGATGCCTTTGAAAt                                                                                                                     >  1:150380‑M2/119‑149 (MQ=255)
                          aatccagctaagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATc                                                                                                                    >  2:1647655‑M2/118‑149 (MQ=255)
                           atcactctaagaggtgaggttttcagagcagacaaaggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCg                                                                                                                   <  2:767290‑M2/33‑1 (MQ=255)
                             ccagcttagaggtgaggttttcagagcagacaactgtgatatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGaa                                                                                                                 <  1:1003605‑M2/35‑1 (MQ=255)
                             ccagctaagaggggaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGGGGGTGATGCCTTTGAAATCGaa                                                                                                                 <  1:1761520‑M2/35‑1 (MQ=255)
                                 ctaagaggtgaggttttcagagcagacaacggtgaaatgtcattgtattgttacgtttaggtaacaagaaatttgtctgcacaagtattacatcatgattatggcgaaacACATCAGAACCGTGTGTGATCCCATTGAAATCGAACAgg                                                                                                             >  2:1235989‑M2/111‑149 (MQ=255)
                                  taagaggtgaggttttcagagcagacaacgttgaaatgtcattgtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                                                                            <  2:357811‑M2/40‑1 (MQ=255)
                                  taagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                                                                            >  2:787381‑M2/110‑149 (MQ=255)
                                  taagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGt                                                                                                            >  2:717738‑M2/110‑149 (MQ=255)
                                   aagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGtt                                                                                                           >  1:915718‑M2/109‑149 (MQ=255)
                                   aagaggtgaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACAGTGGGTGATGCCTTTGAAATCGAACAGGtt                                                                                                           >  2:1488455‑M2/109‑149 (MQ=255)
                                       ggtgatgttttcagagcagacaacggtgaaatgtcatggtatggttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTa                                                                                                       <  2:890176‑M2/45‑1 (MQ=255)
                                        gtgaggttttcagcgcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTAt                                                                                                      >  1:634163‑M2/104‑149 (MQ=255)
                                         tgagggtttcagatcagacaacggtgaaatgtcatggtatggttacgtgtaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTGGGTATc                                                                                                     <  1:117472‑M2/47‑1 (MQ=255)
                                          gaggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGCACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCg                                                                                                    >  2:1219344‑M2/102‑149 (MQ=255)
                                           aggttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGc                                                                                                   >  2:674485‑M2/101‑149 (MQ=255)
                                              ttttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGcaca                                                                                                <  1:1647655‑M2/52‑1 (MQ=255)
                                                ttcagagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGa                                                                                              >  2:1127257‑M2/96‑149 (MQ=255)
                                                   agagcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGc                                                                                           <  1:674485‑M2/57‑1 (MQ=255)
                                                     agcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATTCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGa                                                                                         >  1:503334‑M2/91‑149 (MQ=255)
                                                      gcagacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGAc                                                                                        <  1:798912‑M2/60‑1 (MQ=255)
                                                         gacaacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGc                                                                                     <  1:220349‑M2/63‑1 (MQ=255)
                                                            aacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacc                                                                                  >  2:1176354‑M2/84‑149 (MQ=255)
                                                            aacggtgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGcacc                                                                                  >  1:562276‑M2/84‑149 (MQ=255)
                                                                 tgaaatgtcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACAtt                                                                             >  2:1845661‑M2/79‑149 (MQ=255)
                                                                 tgaaatgtcatggtatagttacgtttaggtaacaagaaatttgtctgcacaaggaatacatcatgattatggcgaaacACTACAGAACAGTGGGTGATGCCTTTGAAATCGAAAAGGATGGTATCGCACAGATGCGACGGCACCACAtt                                                                             >  2:441043‑M2/79‑149 (MQ=255)
                                                                   aaatgtcatggtattgttacgtttaggtaacaagaaaattgtctgcacaaggattacatcatgattatggcgcaacACTTCAGAACCGTGGGTGATGCATTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCt                                                                           >  1:1195936‑M2/77‑149 (MQ=255)
                                                                        tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGCACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                                                                      >  1:1202325‑M2/72‑149 (MQ=255)
                                                                        tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACTGATGCGACGGCACCACATTCTGCATc                                                                      <  2:32399‑M2/78‑1 (MQ=255)
                                                                        tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                                                                      >  1:671808‑M2/72‑149 (MQ=255)
                                                                        tcatggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATc                                                                      >  2:1346252‑M2/72‑149 (MQ=255)
                                                                         catggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcg                                                                     >  1:746967‑M2/71‑149 (MQ=255)
                                                                           tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATTCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                                                                   >  2:857779‑M2/69‑149 (MQ=255)
                                                                           tggtattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                                                                   >  2:514262‑M2/69‑149 (MQ=255)
                                                                           tggtattgttacgtttaggtaacaagaaatttggctgcacaaggattacattatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATcgcg                                                                   <  1:97234‑M2/81‑1 (MQ=255)
                                                                              tcttgttacctaaacgtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                                                                >  1:115956‑M2/66‑149 (MQ=255)
                                                                              tattgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTg                                                                >  1:1652658‑M2/66‑149 (MQ=255)
                                                                                ttgttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGaa                                                              <  2:1815203‑M2/86‑1 (MQ=255)
                                                                                   ttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTTATCCCTTTGAAATCGAACAGGTTGTTATCGCACAGATTCGACGGCACCACAATCTGCATCGCGCTGAACAt                                                           >  1:488805‑M2/61‑149 (MQ=255)
                                                                                   ttacgtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACAt                                                           >  1:1343808‑M2/61‑149 (MQ=255)
                                                                                       gtttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtc                                                       <  2:443750‑M2/93‑1 (MQ=255)
                                                                                        tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGACCAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct                                                      <  2:1578683‑M2/94‑1 (MQ=255)
                                                                                        tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct                                                      <  2:150380‑M2/94‑1 (MQ=255)
                                                                                        tttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGGGATGCCTTTGAAATCGAACAGGTTTGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtct                                                      <  1:1705942‑M2/94‑1 (MQ=255)
                                                                                         ttaggtatcaagaaatttgtctgcacaaggattacatcatgattatggcgaatcACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc                                                     <  2:21059‑M2/95‑1 (MQ=255)
                                                                                         ttaggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGtctc                                                     <  1:937207‑M2/95‑1 (MQ=255)
                                                                                           aggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGa                                                   >  1:106844‑M2/53‑149 (MQ=255)
                                                                                            ggtaacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGAt                                                  <  2:236629‑M2/98‑1 (MQ=255)
                                                                                            ggtaacaagaaatttggctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGAt                                                  <  1:1611441‑M2/98‑1 (MQ=255)
                                                                                               aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACg                                               >  2:1422455‑M2/49‑149 (MQ=255)
                                                                                               aacaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACg                                               >  2:377145‑M2/49‑149 (MQ=255)
                                                                                                acaagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGc                                              >  2:199438‑M2/48‑149 (MQ=255)
                                                                                                  aagaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGccc                                            >  1:1601285‑M2/46‑149 (MQ=255)
                                                                                                    gaaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTg                                          <  2:412127‑M2/106‑1 (MQ=255)
                                                                                                     aaatttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTgg                                         >  1:1478200‑M2/43‑149 (MQ=255)
                                                                                                       atttgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGAt                                       >  2:541522‑M2/41‑149 (MQ=255)
                                                                                                         ttgtctgcacaaggattacttcatgattatggcgaaacACTTCAGAACCGTGTGTGATTCCTTTGAAATCTAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATaa                                     <  2:809805‑M2/111‑1 (MQ=255)
                                                                                                          tgtctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAAc                                    <  1:199438‑M2/112‑1 (MQ=255)
                                                                                                          tgtctgcacaaggaatacttcatgattatggcgaaacACTGCAGAACCGTGGGTGAAGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAAc                                    <  1:1235989‑M2/112‑1 (MQ=255)
                                                                                                            tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGt                                  <  2:989476‑M2/114‑1 (MQ=255)
                                                                                                            tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGt                                  >  2:705553‑M2/36‑149 (MQ=255)
                                                                                                            tctgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGt                                  <  2:634163‑M2/114‑1 (MQ=255)
                                                                                                              tgcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGttt                                >  1:60940‑M2/34‑149 (MQ=255)
                                                                                                               gcacaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTa                               >  2:173263‑M2/33‑149 (MQ=255)
                                                                                                                 acaaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGTTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATAGTCTCGATACTCCCTGGATACCGTTTATc                             >  2:91630‑M2/31‑149 (MQ=255)
                                                                                                                  caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATcc                            <  2:674424‑M2/120‑1 (MQ=255)
                                                                                                                  caaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATcc                            >  2:263013‑M2/30‑149 (MQ=255)
                                                                                                                   aaggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATccc                           >  2:1410800‑M2/29‑149 (MQ=255)
                                                                                                                    aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCa                          <  1:1219344‑M2/122‑1 (MQ=255)
                                                                                                                    aggattacatcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGAATCGCACAGATCCGACGGCACCACATTCTGCAACGCGCAGAACAACGTCTCGATACGCCCTGGATAACGTTAATCCCa                          >  2:137266‑M2/28‑149 (MQ=255)
                                                                                                                             tcatgattatggcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGCTGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCaa                 >  2:1432335‑M2/19‑149 (MQ=255)
                                                                                                                             tcatgaatatggcgaaacACTTCATTACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCaa                 <  2:1202325‑M2/131‑1 (MQ=255)
                                                                                                                                        gcgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCaa      >  1:1074480‑M2/8‑149 (MQ=255)
                                                                                                                                         cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCTCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAAt     >  1:673673‑M2/7‑149 (MQ=255)
                                                                                                                                         cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa                                                 >  2:59514‑M2/7‑105 (MQ=255)
                                                                                                                                         cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATa                                                 <  1:59514‑M2/99‑1 (MQ=255)
                                                                                                                                         cgaaacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGAAAACGTTTATCCCAGTCACGCAACATGTCAGCAAt     <  2:1481530‑M2/143‑1 (MQ=255)
                                                                                                                                            aacACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCAc  <  2:915718‑M2/146‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                 
GCATCGGGCGCTATCCTGGTTATTTCACTTCAACCACATTCAGCCGTAACTCATCCAACTGATTTTCATCTTCTTCTGGCTGCCAGCACGCCGGTTGTAGTGGGATCTCTTCGCGATCAAACGCCAGATCACCCCCGTTAACCACTTCAGAACCGTGGGTGATGCCTTTGAAATCGAACAGGTTGGTATCGCACAGATGCGACGGCACCACATTCTGCATCGCGCTGAACATCGTCTCGATACGCCCTGGATAACGTTTATCCCAGTCACGCAACATGTCAGCAATCAC  >  NC_000913/1410994‑1411282

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: