| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,440,243 | T→G | T263P (ACT→CCT) | rpoA ← | RNA polymerase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,440,243 | 0 | T | G | 98.8% | 299.2 / NA | 86 | T263P (ACT→CCT) | rpoA | RNA polymerase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (41/44); total (42/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCTCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGTCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTC > NC_000913_3_pae_pgi/3440097‑3440387 | tCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCaa > 1:342138/1‑150 (MQ=255) aCGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTc > 2:301361/1‑150 (MQ=255) aCGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTc > 1:389884/1‑150 (MQ=255) gAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGa < 2:341777/150‑1 (MQ=255) aaGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGAt < 2:499010/150‑1 (MQ=255) aGCCAGCGCGTCTTTAATCTGAGTAATATATTTTTTACCAAGGTTAGGCGGTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCTGTTAGCAGAGCTGTCAGGCAATTCCAGATc < 2:581199/150‑1 (MQ=255) gCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCg < 3:140305/150‑1 (MQ=255) ccAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACTAAGGTTATGCGTTTTATTGAGCTCAACCCCGGTACGCTGTACCAGATCACCTATCTAGTGTATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGTCAATTCCACATccc > 2:597361/1‑148 (MQ=255) cAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTc < 2:144970/150‑1 (MQ=255) gCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCaa < 4:636920/150‑1 (MQ=255) tCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATCTAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAggg > 1:791660/1‑150 (MQ=255) tAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCgca < 1:195633/150‑1 (MQ=255) tAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCgca > 2:195633/1‑150 (MQ=255) aGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggat > 1:390084/1‑150 (MQ=255) agagATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcgga < 2:111189/150‑1 (MQ=255) gagaTTATTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcggat < 1:605911/150‑1 (MQ=255) agaTTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcggatc > 2:1090167/1‑150 (MQ=255) agaTTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcggatc < 2:1064218/150‑1 (MQ=255) tttttACCAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAAc > 1:962063/1‑150 (MQ=255) ccAAGGTTAGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGt > 4:398634/1‑150 (MQ=255) aGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCtcttc < 3:489489/150‑1 (MQ=255) aGGCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCtcttc < 1:616564/150‑1 (MQ=255) ggCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTc < 2:41849/107‑1 (MQ=255) ggCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTc > 1:41849/1‑107 (MQ=255) ggCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCtcttct > 3:330933/1‑150 (MQ=255) gCGTTTTAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTcttctt > 3:448704/1‑150 (MQ=255) cctggcaaGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACACGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCttt < 2:714017/144‑1 (MQ=255) ttttAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCa < 2:337913/150‑1 (MQ=255) ttttAAGGAGCTCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCa < 3:398634/150‑1 (MQ=255) gCTCAACCCCGGTACGCTGTACGAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTGCAGATCGTCAACAGGGCGTAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCt < 2:33526/150‑1 (MQ=255) tCAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGa > 1:1123577/1‑150 (MQ=255) cAACCCCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGAc < 4:539209/150‑1 (MQ=255) cccGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTAc > 3:32316/3‑150 (MQ=255) cccGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTAc < 2:342138/148‑1 (MQ=255) tACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACAt > 4:402615/1‑147 (MQ=255) tACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACAt < 3:402615/147‑1 (MQ=255) cGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGt < 2:1099113/150‑1 (MQ=255) gTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGt < 2:1117724/150‑1 (MQ=255) tACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTc > 2:818210/1‑150 (MQ=255) aTCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGaa > 2:451675/1‑150 (MQ=255) tCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGaaa > 2:407868/1‑150 (MQ=255) cGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCtt > 3:454674/1‑150 (MQ=255) tataGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCa < 4:330933/150‑1 (MQ=255) gTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCttt > 1:264809/1‑102 (MQ=255) gTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCttt < 2:264809/102‑1 (MQ=255) tGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAgttgt > 4:52505/1‑150 (MQ=255) gATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTc > 2:900350/1‑150 (MQ=255) aTAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTAc > 4:602756/1‑116 (MQ=255) aTAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTAc < 3:602756/116‑1 (MQ=255) tAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAggg < 1:618099/59‑1 (MQ=255) tAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAggg > 2:618099/1‑59 (MQ=255) aGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGc < 1:1090167/150‑1 (MQ=255) gCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGcc < 1:900350/150‑1 (MQ=255) cTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCa < 4:32316/150‑1 (MQ=255) ttCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAg < 4:479889/150‑1 (MQ=255) ttCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAACAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACg < 3:295377/117‑1 (MQ=255) ttCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAACAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACg > 4:295377/1‑117 (MQ=255) tCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCaa > 2:197600/1‑35 (MQ=255) tCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCaa < 1:197600/35‑1 (MQ=255) tCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCTAACTCTGGTTTCTCTTCTTTCACTTCa < 1:817677/99‑1 (MQ=255) tCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCa > 2:817677/1‑99 (MQ=255) tCTGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGa > 1:378325/1‑150 (MQ=255) tGCTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAAt > 2:297754/1‑150 (MQ=255) cTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTc < 4:434480/89‑1 (MQ=255) cTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTc > 3:434480/1‑89 (MQ=255) cTTTAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATgg > 4:683314/1‑150 (MQ=255) tttAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcggat < 4:157194/65‑1 (MQ=255) tttAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAggatcggat > 3:157194/1‑65 (MQ=255) ttAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGtt > 2:508054/1‑150 (MQ=255) tAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGGTCGTCAACAGGGCGCTTGACGATGGGATGGAGCTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTg < 1:676117/150‑1 (MQ=255) tAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGaaa > 1:917853/1‑122 (MQ=255) tAAGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGaaa < 2:917853/122‑1 (MQ=255) aGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGaa > 3:473688/1‑142 (MQ=255) aGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGaa < 4:473688/142‑1 (MQ=255) aGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGcc > 1:851639/1‑150 (MQ=255) aGGCAGTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGcc > 2:642795/1‑150 (MQ=255) gTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCa > 1:73449/1‑85 (MQ=255) gTTAGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCa < 2:73449/85‑1 (MQ=255) aGCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCacgccg > 2:308730/1‑150 (MQ=255) gCAGAGCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCAcgacga > 1:640495/1‑150 (MQ=255) gCGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGc < 3:119432/150‑1 (MQ=255) cGGACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGcc < 4:454674/150‑1 (MQ=255) ggACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCct < 2:390084/150‑1 (MQ=255) gACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCctc > 1:404314/1‑150 (MQ=255) gACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCctc < 4:448704/150‑1 (MQ=255) gACAGGCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCctc < 2:348345/150‑1 (MQ=255) | TCCACGGGAAGCCAGCACGTCTTTAATCTCAGTAAGAGATTTTTTACCAAGGTTAGGCGTTTTAAGGAGCTCAACCTCGGTACGCTGTACCAGATCACCGATATAGTGGATAGCTTCTGCTTTAAGGCAGTTAGCAGAGCGGACAGTCAATTCCAGATCGTCAACAGGGCGCAGCAGGATCGGATCGAACTCTGGTTTCTCTTCTTTCACTTCAGGCTGACGTACATCACGTAAGTCAACGAAAGCTTCCAGTTGTTCAGCCAGAATGGTTGCCGCACGACGAATCGCCTC > NC_000913_3_pae_pgi/3440097‑3440387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |