New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	1207790 =	14 (0.210)	48 (0.800)	40/246	0.6	81.1%	coding (290/630 nt)	stfP	e14 prophage; uncharacterized protein
	?	NC_000913_3_pae_pgi	1209619 =	10 (0.170)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

TTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/1207949‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCG  >  NC_000913_3_pae_pgi/1209619‑1209766                                                                                                                                                                                                                                                                                                                        TTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGATCTGAAGAGCAG‑CCG‑TCCTAATGAAGCCATTGCTGCATTGAGTTTTGCTCCTTC                                                                                                                                                                 >  1:584343/1‑149   TCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTC                                                                                                                                                               >  2:725273/1‑149     CATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCC                                                                                                                                                             >  2:938048/1‑149      ATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCA                                                                                                                                                            >  2:33238/1‑149      ATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAAAGCTTACGGATTGCTCAATACCACCAACCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTCATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCA                                                                                                                                                            >  2:1108524/1‑149       TCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCca                                                                                                                                                           >  2:606907/1‑147       TCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAA                                                                                                                                                           <  1:1151212/149‑1         CCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAAC                                                                                                                                                         >  2:1049654/1‑149                           TTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGA                                                                                                                                       >  1:927034/1‑149                           TTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGA                                                                                                                                       >  1:806174/1‑149                            TTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAA                                                                                                                                      <  1:725273/149‑1                                   CATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAA                                                                                                                               <  1:84460/149‑1                                       CCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAG                                                                                                                           <  1:568885/149‑1                                         ACCCCCACTGAATGATTACTGATTACTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCA                                                                                                                         >  1:1049571/1‑149                                                           CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCT                                                                                                       >  1:671343/1‑149                                                           CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCACCATTCCTGCT                                                                                                       <  1:1178417/149‑1                                                           CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAG                                                                                                                           >  2:116710/1‑129                                                           CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAG                                                                                                                           <  1:116710/129‑1                                                            TGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTT                                                                                                      >  2:632554/1‑149                                                              ATTGCTCAATACCACCAATCATAACCGGTATCGATAAAAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTT                                                                                                    >  1:1196756/1‑149                                                               TTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTA                                                                                                   >  1:686087/1‑149                                                                TGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAC                                                                                                  <  2:671343/149‑1                                                                 GCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACC                                                                                                 >  1:561664/1‑149                                                                     AATACCCCCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGG                                                                                             <  1:1174700/149‑1                                                                     AATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGG                                                                                             >  2:964393/1‑149                                                                      ATACCACCAATCATAACGGGTATAGCTCTGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTAGCTGCATTGAGTTCTTCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCTTTCCTGCTTTGACCAGGGG                                                                                            <  2:1024488/149‑1                                                                          CACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAA                                                                                                                                          <  2:1149811/99‑1                                                                          CACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAA                                                                                                                                          >  1:1149811/1‑99                                                                          CACCAATCATAACCGGTATAGCCAT‑CA‑CGCTTAGCGTTGCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAACAAATGGCATCATTCCTGCTTTTACCAGGGTGATT                                                                                        >  2:571609/1‑149                                                                          CACCAATCATAACCGGTAGAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCTTTGCTGCATTGAGTTTTGCTCCTTCTCCCTAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCCCTCCTGCTTTTACCAGGGGGATT                                                                                        <  2:1051977/149‑1                                                                           ACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGTGGATTT                                                                                       >  2:308962/1‑149                                                                           ACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGTTTT                                                                                       >  1:1010161/1‑149                                                                            CCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTA                                                                                      >  2:766059/1‑149                                                                                    AACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTT                                                                              >  1:731717/1‑149                                                                                      CCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAAGGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAT                                                                            >  1:959906/1‑149                                                                                       cgggagtGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATT                                                                           <  1:880999/142‑1                                                                                       CGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATT                                                                           <  1:1049654/149‑1                                                                                        GGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG                                                                          <  2:927034/149‑1                                                                                         GTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGG                                                                         <  2:561664/149‑1                                                                                           ATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCT                                                                       <  1:1165168/149‑1                                                                                             AGCTATGAA‑ACTGCGGCG‑TTCGAATGGAGCCGTTGCTGCATTGAGGTTTGCTCCTTCTTCCAAACCAACGTTTATTAAAATGAAGAAATAACAAGCAAATGGCATCCTTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAT                                                                     <  2:41587/149‑1                                                                                             AGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAT                                                                     <  1:632554/149‑1                                                                                                        CCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAT                                                           <  1:33238/149‑1                                                                                                               G‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGATTATTGGCTATGTACGCGTCTATACAAA                                                    >  2:609014/1‑149                                                                                                                   CTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGA                                                 <  2:1196756/149‑1                                                                                                                    TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                   >  1:626771/1‑114                                                                                                                    TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                   <  2:626771/114‑1                                                                                                                    TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAT                                                                                                                                 <  2:130787/68‑1                                                                                                                    TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAAT                                                                                                                                 >  1:130787/1‑68                                                                                                                              GTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAG                                      <  1:1108524/149‑1                                                                                                                                TGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAT                                    <  2:1049571/149‑1                                                                                                                                  CTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCT                                  <  1:139338/149‑1                                                                                                                                     CATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACA                               >  1:256296/1‑149                                                                                                                                           GTTTTGCACCTCCTCCCAAACCAACTTTTATCAACATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA                         <  2:238763/149‑1                                                                                                                                                 CTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAAATCTACAACGTAAAGCGCT                   >  1:348288/1‑149                                                                                                                                                  TCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTG                  >  2:644851/1‑149                                                                                                                                                     TTCTCCAAACCTAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAC               >  2:267515/1‑149                                                                                                                                                         CCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATT                                                                                        >  2:464369/1‑72                                                                                                                                                         CCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATT                                                                                        <  1:464369/72‑1                                                                                                                                                          CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATAATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAGGACGCGACCAAAGATATACAACGTAATGCTCTGActtagtc          >  1:176338/1‑142                                                                                                                                                           CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA         <  1:665850/149‑1                                                                                                                                                           CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCA         >  1:1199178/1‑149                                                                                                                                                            AAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAG        >  2:152668/1‑149                                                                                                                                                                 AACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC   <  1:152668/149‑1                                                                                                                                                                 AACGTGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATTTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGC   <  1:493446/149‑1                                                                                                                                                                  ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCG  >  1:1061398/1‑149                                                                                                                                                                  ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCG  >  2:1150330/1‑149                                                                                                                                                                                                                                                                                                                        TTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAA‑ACCGGTGCG‑TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/1207949‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCG  >  NC_000913_3_pae_pgi/1209619‑1209766

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.