Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_pae_pgi 1528366–1529174 1529234–1529181 8–869 125 [122] [122] 125 rhsE pseudogene, Rhs family

Only 100 of 125 total aligned reads displayed.

CAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACC  >  NC_000913_3_pae_pgi/1528266‑1528425
                                                                                                   |                                                            
cAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACa                                                              <  2:2549122/100‑1 (MQ=39)
cAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACa                                                              <  1:412689/100‑1 (MQ=39)
cAGGCCAGTTACAGAGCCAGCAACTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGAGCTGGTGCGCATCAGCGGCCCGCGACa                                                              <  1:114068/100‑1 (MQ=255)
  ggCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGa                                                            <  2:5131458/100‑1 (MQ=39)
   gCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAc                                                           >  1:861274/1‑100 (MQ=38)
   gCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAc                                                           >  1:78416/1‑100 (MQ=39)
   gCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAc                                                           >  1:3653937/1‑100 (MQ=39)
    ccAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAcg                                                          >  1:1102890/1‑100 (MQ=38)
      aGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAcgcg                                                        <  1:1570200/100‑1 (MQ=39)
       gTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCgg                                                       <  1:979572/100‑1 (MQ=39)
       gTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCgg                                                       <  1:3345056/100‑1 (MQ=39)
        ttACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCggg                                                      <  2:910350/100‑1 (MQ=38)
        ttACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCggg                                                      <  1:619025/100‑1 (MQ=39)
        ttACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCggg                                                      <  1:1401972/100‑1 (MQ=39)
        ttACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCggg                                                      <  1:2185609/100‑1 (MQ=39)
         tACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCggg                                                      >  1:3797641/1‑99 (MQ=39)
           cAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGaa                                                    >  1:4021928/1‑99 (MQ=38)
           cAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGaa                                                    <  2:145533/99‑1 (MQ=39)
           cAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGaa                                                    >  1:3183698/1‑99 (MQ=37)
             gagCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATa                                                  <  2:363807/99‑1 (MQ=38)
             gagCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATAc                                                 >  1:562106/1‑100 (MQ=39)
             gagCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATAc                                                 >  2:2745688/1‑100 (MQ=39)
              agCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATa                                                  <  2:1055832/98‑1 (MQ=37)
               nccAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACgg                                               >  1:1150829/2‑100 (MQ=39)
               gCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACgg                                               >  1:1359277/1‑100 (MQ=39)
               gCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACgg                                               >  1:1692268/1‑100 (MQ=39)
                ccAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGc                                              <  2:863408/100‑1 (MQ=39)
                 cAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGc                                              >  1:1989889/1‑99 (MQ=39)
                 cAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGc                                              >  1:4010079/1‑99 (MQ=38)
                  aGCACCTGAACAGCCT‑GTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTa                                            >  2:4672686/1‑99 (MQ=255)
                   gCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTa                                            >  1:4525344/1‑99 (MQ=39)
                    cACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCAGCCCGCGACAGACGCGGGAATACGGCTACa                                          <  2:3771240/100‑1 (MQ=255)
                      ccTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgc                                        >  1:832567/1‑100 (MQ=39)
                      ccTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgc                                        >  2:3295773/1‑100 (MQ=39)
                       cTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgcg                                       <  2:2986204/100‑1 (MQ=38)
                        tGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgcgc                                      >  1:3501897/1‑100 (MQ=39)
                        tGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgcgc                                      >  2:2934975/1‑100 (MQ=39)
                          aaCAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgcgc                                      <  1:3789468/98‑1 (MQ=39)
                          aaCAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCa                                    <  1:4533211/100‑1 (MQ=39)
                            cAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACg                                  <  2:3254391/100‑1 (MQ=37)
                             aGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACgg                                 <  1:1190879/100‑1 (MQ=39)
                              gCCTGGTTTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCTGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCAc                                   >  1:827858/1‑97 (MQ=16)
                              gCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                <  2:3141211/100‑1 (MQ=38)
                              gCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                <  1:2698073/100‑1 (MQ=39)
                              gCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACgg                                 >  2:2276907/1‑99 (MQ=39)
                               ccTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                >  1:2617802/1‑99 (MQ=39)
                               ccTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                <  2:2260458/99‑1 (MQ=39)
                               ccTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                >  1:165293/1‑99 (MQ=37)
                               ccTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGc                               <  1:4861989/100‑1 (MQ=39)
                                cTGGTGTATGATCGTGGCTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACACACGCGAGAATACGCCTGCAGCGCCATggg                                >  1:4402890/1‑98 (MQ=14)
                                cTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAgcgc                                      >  2:249287/1‑92 (MQ=39)
                                cTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACggg                                >  2:76823/1‑98 (MQ=39)
                                cTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCa                              <  2:1137883/100‑1 (MQ=39)
                                  ggTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAgg                            >  2:1293734/1‑100 (MQ=38)
                                  ggTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGCGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACg                                  >  2:2481735/1‑94 (MQ=37)
                                   gtgtATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAgg                            <  1:3691785/99‑1 (MQ=38)
                                   gtgtATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAgg                            >  2:1166329/1‑99 (MQ=38)
                                   gtgtATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAg                             <  1:3039802/98‑1 (MQ=38)
                                    tgtATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCt                          >  1:2341457/1‑100 (MQ=37)
                                      taggACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTgg                        <  2:4461216/97‑1 (MQ=18)
                                      tATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTg                         >  2:3692104/1‑99 (MQ=33)
                                       aTGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTg                         >  2:476582/1‑98 (MQ=34)
                                       aTGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTg                         >  2:175010/1‑98 (MQ=34)
                                        tGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTg                         >  2:3322214/1‑97 (MQ=34)
                                        tGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGgag                      <  2:4497073/100‑1 (MQ=33)
                                          aCCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGAcgcg                                                        >  1:4257563/1‑64 (MQ=35)
                                          aCCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGga                       <  2:2842916/97‑1 (MQ=33)
                                          aCCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGga                       >  1:4538736/1‑97 (MQ=34)
                                          aCCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGagag                    >  1:811429/1‑100 (MQ=34)
                                          aCCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGagag                    <  2:5246741/100‑1 (MQ=33)
                                           ccGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCgg                                                       <  2:4247568/64‑1 (MQ=37)
                                           ccGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAgt                   >  2:852238/1‑100 (MQ=34)
                                            ngTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGga                       >  1:277072/2‑95 (MQ=21)
                                            cGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATTAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGgaga                     <  2:5074004/97‑1 (MQ=18)
                                              tGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGtgtg                <  1:4815953/100‑1 (MQ=34)
                                                aCTACGGGTGGAATGACAACGGCGACCTGGTGCGCGTCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCTGCGGGCAGGCTGGAGAGTGTgcg              <  2:3000439/100‑1 (MQ=255)
                                                aCTACGGGTGGAATGACAACGGCGACCTGGTGCGCATGAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTgcg              <  1:4352324/100‑1 (MQ=21)
                                                 cTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTgcg              >  2:1302674/1‑99 (MQ=34)
                                                 cTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTgcg              >  1:4594702/1‑99 (MQ=34)
                                                   aCGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCCCGGGCAGGCTGGAGAGTGTgcgccc           >  1:1783928/1‑98 (MQ=19)
                                                   aCGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCAc           >  1:5251818/1‑100 (MQ=34)
                                                   aCGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCAc           >  2:2239488/1‑100 (MQ=34)
                                                    cGGGTGGAATGGCAACGGCGACCTGGTGCGCATCAACGGCCCGCTACAGACGCGGGAATACGGCTCAAGCGCCACGGGCACGCTGGAGAGTGTGCGCAcc          >  2:4394696/1‑100 (MQ=11)
                                                    cGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTgcgc             <  2:584750/97‑1 (MQ=33)
                                                    cGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCa            <  1:2751022/98‑1 (MQ=33)
                                                    cGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCa            <  2:1059417/98‑1 (MQ=33)
                                                    cGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCAcc          >  1:4559812/1‑100 (MQ=34)
                                                    cGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCAcc          >  1:4716303/1‑100 (MQ=34)
                                                      ggTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCt        <  2:4283570/100‑1 (MQ=33)
                                                      ggTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCt        <  2:1502508/100‑1 (MQ=33)
                                                       gTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTc       >  1:2491602/1‑100 (MQ=34)
                                                       gTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGGGCGCACCCTc       >  1:623393/1‑100 (MQ=21)
                                                         ggAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCg      >  1:102229/1‑99 (MQ=33)
                                                         ggAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCg      >  1:4060666/1‑99 (MQ=33)
                                                         ggAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCg      >  1:2363983/1‑99 (MQ=33)
                                                          gAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGc     <  2:4259756/99‑1 (MQ=33)
                                                          gAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGc     <  2:381204/99‑1 (MQ=33)
                                                          gAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGAGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGc     <  2:1573947/99‑1 (MQ=18)
                                                           aaTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCAc   >  1:4460946/1‑100 (MQ=32)
                                                            aTGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCAcc  <  2:213174/100‑1 (MQ=31)
                                                                                                   |                                                            
CAGGCCAGTTACAGAGCCAGCACCTGAACAGCCTGGTGTATGACCGTGACTACGGGTGGAATGACAACGGCGACCTGGTGCGCATCAGCGGCCCGCGACAGACGCGGGAATACGGCTACAGCGCCACGGGCAGGCTGGAGAGTGTGCGCACCCTCGCACC  >  NC_000913_3_pae_pgi/1528266‑1528425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑