New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_KO_pgi = 12994980 (0.000)225 (1.160) 121/188 0.0 100% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913_3_KO_pgi 1300698 = 0 (0.000)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 244 total aligned reads displayed.

CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913_3_KO_pgi/1300600‑1300797
                                                                                                  |                                                                                                   
catcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaa                                                                                                     >  2:3271584‑M2/99‑99 (MQ=255)
 atcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaat                                                                                                    <  2:1529801‑M2/2‑1 (MQ=255)
  tcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaat                                                                                                    >  2:2544655‑M2/97‑98 (MQ=255)
     tgttattttcaccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataa                                                                                               <  1:1964842‑M2/7‑1 (MQ=255)
      gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                              >  1:2115302‑M2/93‑100 (MQ=255)
       ttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                             <  1:4250549‑M2/9‑1 (MQ=255)
         attttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATc                                                                                             >  2:1874920‑M2/90‑98 (MQ=255)
          ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                          >  1:3997102‑M2/89‑100 (MQ=255)
             tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                         <  2:1656094‑M2/13‑1 (MQ=255)
             tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGt                                                                                       >  1:2286527‑M2/86‑100 (MQ=255)
             tcgccacatcataatcctgggcttgctgaagaataattgaaatgatattaataattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                        >  2:4609439‑M2/86‑99 (MQ=255)
              cgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccacagcctttggtagaggaaagtgctaaataa                                                                                                  >  2:2668246‑M2/85‑88 (MQ=255)
               gccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                     <  1:2689780‑M2/17‑1 (MQ=255)
                ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaataccactgcctttggtagaggaaagtgctaaATAATAATCAATTGtt                                                                                      <  2:3517732‑M2/16‑1 (MQ=255)
                     tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                               >  1:3108027‑M2/78‑100 (MQ=255)
                     tcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                               >  1:4504903‑M2/78‑100 (MQ=255)
                      cataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                               >  2:4939832‑M2/77‑99 (MQ=255)
                       ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              >  2:82896‑M2/76‑99 (MQ=255)
                       ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  1:1421721‑M2/25‑1 (MQ=255)
                       ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  1:3455712‑M2/25‑1 (MQ=255)
                       ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  1:4424831‑M2/25‑1 (MQ=255)
                        taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              <  2:2628695‑M2/24‑1 (MQ=255)
                        taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              <  2:4194042‑M2/24‑1 (MQ=255)
                        taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                              <  2:68095‑M2/24‑1 (MQ=255)
                        taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtg                                                                             <  2:1520395‑M2/25‑1 (MQ=255)
                          atcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                          <  1:3006726‑M2/28‑1 (MQ=255)
                             ctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       >  1:3785939‑M2/70‑100 (MQ=255)
                                ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAttt                                                                      <  2:2988195‑M2/32‑1 (MQ=255)
                                ggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCAtt                                                                       <  2:1398141‑M2/31‑1 (MQ=255)
                                 gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   >  1:1252899‑M2/66‑100 (MQ=255)
                                 gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                    <  2:4208963‑M2/34‑1 (MQ=255)
                                  cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCact                                                                  <  1:933874‑M2/36‑1 (MQ=255)
                                  cttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                   >  1:1355361‑M2/65‑99 (MQ=255)
                                   ttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtactaaATAATAATCAATTGTTAAATTATTGGGCATTTCac                                                                   >  2:4970283‑M2/64‑98 (MQ=255)
                                     gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                <  1:712247‑M2/38‑1 (MQ=255)
                                     gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                 <  2:3165482‑M2/37‑1 (MQ=255)
                                      ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTtcacaa                                                                 >  2:4265283‑M2/61‑95 (MQ=255)
                                      ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                               >  2:3492093‑M2/61‑99 (MQ=255)
                                      ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactac                                                                <  2:4867108‑M2/38‑1 (MQ=255)
                                      ctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                              >  1:4998392‑M2/61‑100 (MQ=255)
                                        gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                             >  1:60164‑M2/59‑99 (MQ=255)
                                         aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                             >  2:4759407‑M2/58‑98 (MQ=255)
                                         aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTg                                                              <  2:777195‑M2/40‑1 (MQ=255)
                                           gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         <  1:2487291‑M2/45‑1 (MQ=255)
                                           gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         <  1:101209‑M2/45‑1 (MQ=255)
                                           gaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACt                                                         >  1:576537‑M2/56‑100 (MQ=255)
                                            aataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                        <  1:1644381‑M2/46‑1 (MQ=255)
                                              taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCACTTGTTAAATTATTGTGCATTTCACTACTGGAActc                                                        >  2:4896687‑M2/53‑97 (MQ=255)
                                              taattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTa                                                      <  1:720647‑M2/48‑1 (MQ=255)
                                               aattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                     >  1:1514780‑M2/52‑100 (MQ=255)
                                                 ttgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                   <  1:2826648‑M2/51‑1 (MQ=255)
                                                   gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATc                                                   <  2:2287664‑M2/51‑1 (MQ=255)
                                                   gaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                  <  1:2927735‑M2/52‑1 (MQ=255)
                                                    aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCa                                                  <  2:3751011‑M2/52‑1 (MQ=255)
                                                    aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAg                                                 <  2:6974‑M2/53‑1 (MQ=255)
                                                    aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGa                                                <  1:4684054‑M2/54‑1 (MQ=255)
                                                    aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGa                                                <  1:4248958‑M2/54‑1 (MQ=255)
                                                     aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGa                                                <  2:4686237‑M2/54‑1 (MQ=255)
                                                       tgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                             <  1:2528444‑M2/57‑1 (MQ=255)
                                                         atattattaattccactgcctttggtagaggaaagtgctaaATGATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                            <  1:3774205‑M2/58‑1 (MQ=255)
                                                         atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                             <  2:2163016‑M2/57‑1 (MQ=255)
                                                         atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                             <  2:1044124‑M2/57‑1 (MQ=255)
                                                         atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAg                                            <  1:3612214‑M2/58‑1 (MQ=255)
                                                           attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGa                                           >  1:1274604‑M2/40‑98 (MQ=255)
                                                            ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAg                                        <  1:4789113‑M2/62‑1 (MQ=255)
                                                              attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                       >  2:4015129‑M2/37‑99 (MQ=255)
                                                               ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                       >  1:3024407‑M2/36‑98 (MQ=255)
                                                                   ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGCAAAGATAGACATGCt                                 >  1:2241779‑M2/32‑100 (MQ=255)
                                                                   ttccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGc                                  <  2:305441‑M2/68‑1 (MQ=255)
                                                                     ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCtt                                <  1:2426026‑M2/70‑1 (MQ=255)
                                                                     ccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCt                                 >  1:3219622‑M2/30‑98 (MQ=255)
                                                                      cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              >  1:4392765‑M2/29‑100 (MQ=255)
                                                                       actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              <  2:3857743‑M2/72‑1 (MQ=255)
                                                                       actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAg                              <  2:2488810‑M2/72‑1 (MQ=255)
                                                                       actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGc                             <  1:1731725‑M2/73‑1 (MQ=255)
                                                                           cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCaa                          >  2:2863315‑M2/24‑99 (MQ=255)
                                                                            ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAatn                        <  1:2623523‑M2/78‑2 (MQ=255)
                                                                            ctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAt                         <  2:4983418‑M2/77‑1 (MQ=255)
                                                                             tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        >  2:4297963‑M2/22‑99 (MQ=255)
                                                                             tttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                        >  2:2266158‑M2/22‑99 (MQ=255)
                                                                               tggtagaggaaattgctaaATAATAATCAATTGTTATATTATTGTGCAGTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtctc                      <  1:4168072‑M2/80‑1 (MQ=255)
                                                                                 gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTa                    <  1:4851930‑M2/82‑1 (MQ=255)
                                                                                 gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                   >  1:3683312‑M2/18‑100 (MQ=255)
                                                                                  tagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAt                   <  2:3189489‑M2/83‑1 (MQ=255)
                                                                                   agaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAtt                  >  2:2013533‑M2/16‑99 (MQ=255)
                                                                                     aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAttt                 >  2:3663444‑M2/14‑98 (MQ=255)
                                                                                     aggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga               <  1:4026318‑M2/87‑1 (MQ=255)
                                                                                      ggaaagtgctaaATAATAATCAATTGTTAGATTATTGGGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga               <  2:4107508‑M2/87‑1 (MQ=255)
                                                                                      ggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga               <  2:252341‑M2/87‑1 (MQ=255)
                                                                                        aaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgatt             <  2:2062067‑M2/89‑1 (MQ=255)
                                                                                         aagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattg            <  2:514618‑M2/90‑1 (MQ=255)
                                                                                           gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat         <  1:3279981‑M2/93‑1 (MQ=255)
                                                                                           gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa          <  2:3324567‑M2/92‑1 (MQ=255)
                                                                                           gtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa          <  2:1665697‑M2/92‑1 (MQ=255)
                                                                                            tgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat         <  2:4835334‑M2/93‑1 (MQ=255)
                                                                                             gctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt        >  1:314757‑M2/6‑99 (MQ=255)
                                                                                              ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt        <  2:4418239‑M2/94‑1 (MQ=255)
                                                                                              ctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaatt        <  2:1155683‑M2/94‑1 (MQ=255)
                                                                                                 aATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGAttgaattgaa     <  2:1411914‑M2/97‑1 (MQ=255)
                                                                                                 aATAATAATCAATTGTTAAATTATTGGGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGaaa    <  2:3997616‑M2/98‑1 (MQ=255)
                                                                                                  |                                                                                                   
CAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGA  >  NC_000913_3_KO_pgi/1300600‑1300797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.