New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 12994980 (0.000)102 (1.380) 81/288 0.0 99.5% intergenic (+253/‑1684) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein
?NC_000913_3_hsa_pgi 1300698 = 1 (0.010)intergenic (+1453/‑484) ychE/oppA UPF0056 family inner membrane protein/oligopeptide ABC transporter periplasmic binding protein

Only 100 of 108 total aligned reads displayed.

CTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAAT  >  NC_000913_3_hsa_pgi/1300551‑1300844
                                                                                                                                                   |                                                                                                                                                  
tctcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaat                                                                                                                                                   >  2:265614‑M2/148‑149 (MQ=255)
  tcaaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattcaactgcctttggtagaggaaagtgctaaataa                                                                                                                                                 <  2:1035121‑M2/4‑1 (MQ=255)
  taaaattacagttagttataaggatttccttaactgcttatcctcaccatcatgttattttctccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcatttggtagaggaaagtgctaaataa                                                                                                                                                 >  2:1145126‑M2/146‑149 (MQ=255)
   caaattacagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattgcactgcctttggtagaggaaagtgctaaataat                                                                                                                                                >  2:204079‑M2/145‑149 (MQ=255)
      attacagttagttataaggattcccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaataataat                                                                                                                                             >  1:628662‑M2/142‑149 (MQ=255)
          cagttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAt                                                                                                                                         <  1:589105‑M2/12‑1 (MQ=255)
           agttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAAtt                                                                                                                                        <  2:1038530‑M2/13‑1 (MQ=255)
            gttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTg                                                                                                                                       >  2:557228‑M2/136‑149 (MQ=255)
            ccTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTGCCCCGCTTATTCGCCCCTTCCCTAcataatcattgggtt                                                                                                                                       >  2:550735/1‑143 (MQ=1)
             ttagttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataatggaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGt                                                                                                                                      >  2:46260‑M2/135‑149 (MQ=255)
               agttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTa                                                                                                                                    <  1:660198‑M2/17‑1 (MQ=255)
                gttataaggatttcctaaactccttatcctcaccatcatgtaattttcgccacatcataatcctgggcttgctgaagaataattcaaatgatattattaaatccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaa                                                                                                                                   <  2:82116‑M2/18‑1 (MQ=255)
                 ttataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTaaa                                                                                                                                  >  1:1170384‑M2/131‑149 (MQ=255)
                  gttaaggaaatccttatctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAat                                                                                                                                 >  2:889876‑M2/130‑149 (MQ=255)
                   ataaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAatt                                                                                                                                >  1:54309‑M2/129‑149 (MQ=255)
                    taaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgatgaagaataattgaaatgatattattaattccactgcatttggtagaggaaagtgctaaATAATAATCAATTGTTAAatta                                                                                                                               >  1:883330‑M2/128‑149 (MQ=255)
                     aaggatttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAattat                                                                                                                              >  1:766811‑M2/127‑149 (MQ=255)
                      aggatttccttaacttcttctcctcaccagcatcttatgagcgccaaatcataatcctgggcttgctgaagaatcattgaaatgatattattaattacactgcctttggtataggaaagtgctaaATAATAATCAATTGTTAAattatt                                                                                                                             <  2:759717‑M2/24‑1 (MQ=255)
                         atttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                                                                          <  1:265614‑M2/27‑1 (MQ=255)
                         atttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATtgtg                                                                                                                          <  2:54309‑M2/27‑1 (MQ=255)
                          tttccttaactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGc                                                                                                                         >  1:1058857‑M2/122‑149 (MQ=255)
                                taactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                                   <  1:286029‑M2/34‑1 (MQ=255)
                                taactgcttctcctcaccatcatgttattttcgccacatcataatactgggcttgctgaagtataattgaaatgatattattaattccactgcctttggtagatgaaagtgcttaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                                   <  1:177962‑M2/34‑1 (MQ=255)
                                taactgcttctcctcaacatcatgttattttcgccacatcataatccttggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCa                                                                                                                   <  1:230220‑M2/34‑1 (MQ=255)
                                 aactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                                                                  <  1:339684‑M2/35‑1 (MQ=255)
                                 aactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                                                                  <  1:523750‑M2/35‑1 (MQ=255)
                                 aactgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaaaaattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaAAAATAATCAATTGTTAAATTATTGTGCATTTCac                                                                                                                  <  1:528279‑M2/35‑1 (MQ=255)
                                   ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggtaagtgctaaATAATAATCAATTGTTAAATTATAGTGCATTTCacta                                                                                                                >  2:287437‑M2/113‑149 (MQ=255)
                                   ctgcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCacta                                                                                                                >  1:215705‑M2/113‑149 (MQ=255)
                                     gcttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagattaattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCactact                                                                                                              >  2:362882‑M2/111‑149 (MQ=255)
                                       ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCATTTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                            >  1:513053‑M2/109‑149 (MQ=255)
                                       ttctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTgg                                                                                                            <  1:506336‑M2/41‑1 (MQ=255)
                                         ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgatatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                          >  1:1248563‑M2/107‑149 (MQ=255)
                                         ctcctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGaa                                                                                                          >  1:624657‑M2/107‑149 (MQ=255)
                                          tcctcaccatcatcttattttcgccacatcataatcctgggctggctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAAc                                                                                                         <  2:932879‑M2/44‑1 (MQ=255)
                                            ctcaccatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTg                                                                                                       <  2:502098‑M2/46‑1 (MQ=255)
                                               accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                                                                    <  1:1010494‑M2/49‑1 (MQ=255)
                                               accatcatgttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTaa                                                                                                    >  2:143123‑M2/101‑149 (MQ=255)
                                                       gttattttcgccacatcataatcctgggcttgctgaataataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                            <  2:241596‑M2/57‑1 (MQ=255)
                                                       gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                            <  1:503147‑M2/57‑1 (MQ=255)
                                                       gttattttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGaaaa                                                                                            >  1:11733‑M2/93‑149 (MQ=255)
                                                           ttttcgccacatcataatccttggcttgctgaagaataattgaaatgatattaataattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTTTAATCAGAAAAGATa                                                                                        <  2:892477‑M2/61‑1 (MQ=255)
                                                           ttttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctatATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGTTa                                                                                        <  2:140484‑M2/61‑1 (MQ=255)
                                                             ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                      <  2:973515‑M2/63‑1 (MQ=255)
                                                             ttcgccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGa                                                                                      >  2:1139693‑M2/87‑149 (MQ=255)
                                                                 ccacatcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATg                                                                                  <  1:1158286‑M2/67‑1 (MQ=255)
                                                                     atcatcatcctgggcttgctgaagaataatttaaatgatattattaattccactccctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                              <  2:691438‑M2/71‑1 (MQ=255)
                                                                     atcataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTa                                                                              <  2:828332‑M2/71‑1 (MQ=255)
                                                                        ataatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATAAGAAAAGATAGACATGCTTAGcc                                                                           >  1:152479‑M2/76‑149 (MQ=255)
                                                                         taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTTCATTTCACTACTGGAAATGTAATAAGAAAACATAGACATGCTTAGACa                                                                          >  1:308799‑M2/75‑149 (MQ=255)
                                                                         taatcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCa                                                                          >  1:1030248‑M2/75‑149 (MQ=255)
                                                                            tcctgggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtc                                                                       <  2:1058857‑M2/78‑1 (MQ=255)
                                                                             tcctgggcttgctgaagaataattgaaatgatattattaattccactgccttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAAtct                                                                      <  1:389743‑M2/79‑1 (MQ=255)
                                                                                gggcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCAAATCTCTa                                                                   >  2:538758‑M2/68‑149 (MQ=255)
                                                                                  gcttgctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTAtt                                                                 >  1:1190451‑M2/66‑149 (MQ=255)
                                                                                     tgctgaagaataattgaaatgatattattaattcccctgcctttggtagaggaaagtgctaaATAATAATCAATTTTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttga                                                              <  2:291088‑M2/87‑1 (MQ=255)
                                                                                      gctgaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgat                                                             <  2:104401‑M2/88‑1 (MQ=255)
                                                                                       ctgaagaataattgaaatgatattttaaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAAATGCTTAGCCAATCTCTATttgatt                                                            <  1:1125714‑M2/89‑1 (MQ=255)
                                                                                         gaagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATttgattga                                                          >  1:67018‑M2/59‑149 (MQ=255)
                                                                                         gaagaataagtgaaatgagattattaattccactgcctggggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGACAATCTCTATttgattga                                                          >  2:746719‑M2/59‑149 (MQ=255)
                                                                                          aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa                                                         <  2:699528‑M2/92‑1 (MQ=255)
                                                                                          aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa                                                         >  1:100724‑M2/58‑149 (MQ=255)
                                                                                          aagaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATAATTGTGCAATTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaa                                                         <  2:1052649‑M2/92‑1 (MQ=255)
                                                                                           agaataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaat                                                        <  1:204079‑M2/93‑1 (MQ=255)
                                                                                              ataattttaatgatattatttattccactgcctttgctagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga                                                     <  2:741822‑M2/96‑1 (MQ=255)
                                                                                              ataattgaaatgatattattaattccacttcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATTCTTAGCCAATCTCTATTTGattgaattga                                                     <  2:628662‑M2/96‑1 (MQ=255)
                                                                                              ataattgaaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGattgaattga                                                     <  1:143123‑M2/96‑1 (MQ=255)
                                                                                                     aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGATTTGAAAGAtgt                                              >  2:1074157‑M2/47‑149 (MQ=255)
                                                                                                     aaatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgt                                              >  2:1025944‑M2/47‑149 (MQ=255)
                                                                                                      aatgatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtt                                             <  2:766811‑M2/104‑1 (MQ=255)
                                                                                                       atgtttttattaattccaattgatttggtagaggaaagtgctatATAATAATCAATTTTTTAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGAAATTCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgttt                                            <  1:108860‑M2/105‑1 (MQ=255)
                                                                                                         tatattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgt                                          <  2:359681‑M2/107‑1 (MQ=255)
                                                                                                          atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                         >  1:82935‑M2/42‑149 (MQ=255)
                                                                                                          atattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGAtgtttgtt                                         <  1:570879‑M2/108‑1 (MQ=255)
                                                                                                           tattattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTa                                        >  1:986280‑M2/41‑149 (MQ=255)
                                                                                                            attattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGATAAGATAGCCATGCTTAGCCAATATCTATTTGATTGAATTGAAAGATGTTTGTTaa                                       >  2:972629‑M2/40‑149 (MQ=255)
                                                                                                             ttattaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTATATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAACATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                      >  1:1005534‑M2/39‑149 (MQ=255)
                                                                                                             ttattaattccactgcctgtggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                      >  1:412605‑M2/39‑149 (MQ=255)
                                                                                                             ttattaattccactgcatttggtagaggaaagtgctaaATAATAATAAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTATCCAATATCTATTTGATTGAATTGAAAGATGTTTGTTAAg                                      <  1:1145126‑M2/111‑1 (MQ=255)
                                                                                                               attaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGc                                    >  1:217263‑M2/37‑149 (MQ=255)
                                                                                                                ttaattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCa                                   >  2:611128‑M2/36‑149 (MQ=255)
                                                                                                                 taattccactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTTTTGTGCATTTCACTACTGTAACTGTAATCATAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCAt                                  <  1:1000258‑M2/115‑1 (MQ=255)
                                                                                                                   attccactgcctgtggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGCTAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATgg                                >  2:859578‑M2/33‑149 (MQ=255)
                                                                                                                       cactgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGAATGGATGc                            >  2:416733‑M2/29‑149 (MQ=255)
                                                                                                                        actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                           >  2:290598‑M2/28‑149 (MQ=255)
                                                                                                                        actgcctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                           >  1:989454‑M2/28‑149 (MQ=255)
                                                                                                                        actgcctttggtagaggaaagtgctaaATAATAATCAATAGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCa                           >  2:1233868‑M2/28‑149 (MQ=255)
                                                                                                                            cctttggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCt                       >  1:995902‑M2/24‑149 (MQ=255)
                                                                                                                                tggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAg                   <  1:1139693‑M2/130‑1 (MQ=255)
                                                                                                                                 ggtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTTTGCATTTCACTACTGTAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGa                  <  1:52162‑M2/131‑1 (MQ=255)
                                                                                                                                  gtagaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATTGATGCAAGCTATAGAt                 >  1:292608‑M2/18‑149 (MQ=255)
                                                                                                                                     gaggaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATATCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGAAAGCTATAGATTCt              >  2:1098758‑M2/15‑149 (MQ=255)
                                                                                                                                       tgaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGTAACTGTAATCAGAAAAGATTGACATGCTTAGCCAATCTCTATTTGTTTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGa            <  1:808139‑M2/137‑1 (MQ=255)
                                                                                                                                        gaaagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGAt           >  1:244649‑M2/12‑149 (MQ=255)
                                                                                                                                          aagtgctaaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATAc         <  2:1185466‑M2/140‑1 (MQ=255)
                                                                                                                                               ctaaATAATAATCAATTGTTAAATTATTGTGCATTCCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCa    >  2:67337‑M2/5‑149 (MQ=255)
                                                                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATTCGGTCaa   >  2:506185‑M2/4‑149 (MQ=255)
                                                                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCaa   <  1:859578‑M2/146‑1 (MQ=255)
                                                                                                                                                taaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCaa   <  1:362882‑M2/146‑1 (MQ=255)
                                                                                                                                                 aaATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAATGCATGGATGCAAGCTATAGATTCTGATACGGTCAAt  >  1:735325‑M2/3‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
CTGGGGATAACGCCTTAAATGGCGAAGAAACGGTCTAAATAGGCTGATTCAAGGCATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAAATAATAATCAATTGTTAAATTATTGTGCATTTCACTACTGGAACTGTAATCAGAAAAGATAGACATGCTTAGCCAATCTCTATTTGATTGAATTGAAAGATGTTTGTTAAGGCATGGATGCAAGCTATAGATTCTGATACGGTCAAT  >  NC_000913_3_hsa_pgi/1300551‑1300844

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.