New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	137965 =	40 (0.880)	5 (0.110)	5/282	5.9	11.0%	coding (883/1551 nt)	cueO	multicopper oxidase (laccase)
	?	NC_000913_3_bme_pgi	137989 =	42 (0.950)					coding (907/1551 nt)	cueO	multicopper oxidase (laccase)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAGCGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCT  >  NC_000913_3_bme_pgi/137825‑138110                                                                                                                                             |                                                                                                                                                  ccaGCGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCCTTGGCCTGCTGACg                                                                                                                                           >  2:232697/1‑149 (MQ=255)     cGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGc                                                                                                                                       <  1:667999/149‑1 (MQ=255)     cGACAATCGCCCGCGGTAGGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGc                                                                                                                                       <  2:94621/149‑1 (MQ=255)       aCAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCg                                                                                                                                     <  1:194911/149‑1 (MQ=255)             gCCCCCTGTATGTGATTGCCAGCGCCGGTGGTTTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGc                                                                                                                               <  2:518492/149‑1 (MQ=255)                        gtgATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGCTAACAAACCCTTTGACATGGTGACGCTGCCGGTCAGCCAGATGGGGAt                                                                                                                    >  2:786338/1‑149 (MQ=255)                               ccAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGAtt                                                                                                             >  2:778266/1‑149 (MQ=255)                                     aCGGTGGGCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTGTTGAAGGGCAGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTCAGGCTGCGGTGCAACCAAATGGGGATGGCGATTGCGCCg                                                                                                       >  2:285272/1‑149 (MQ=255)                                       ggtggtCTGCTACCTGAACCAGGGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGtt                                                                                                     <  1:802133/149‑1 (MQ=255)                                           gtCTGCTACTGGAACCAGTGAAGGTGAGGGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGAt                                                                                                 <  2:523487/149‑1 (MQ=255)                                               gccaCCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGCAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGc                                                                                             <  1:6814/146‑1 (MQ=255)                                                         ccAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAGCCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGt                                                                                   >  1:728737/1‑149 (MQ=255)                                                         ccAGTGAAGGTGAGCGAACTGCCGGTGCTGAGGGGCGAGCGTTTTGATGAGCTGGTGAAGGATAACGATAGCAAGCCCTTTGAGCTGGTGGCGATTCGCGGCACACAGAGGGGGGTGGCGGGTGCGCCGTTTGATACGACTCCTCCgga                                                                                   >  2:45908/1‑148 (MQ=255)                                                          cAGTGAAGGTCAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAGGCCTCATCCGGTa                                                                                  >  1:781573/1‑149 (MQ=255)                                                            gTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCgggact                                                                                >  2:303857/1‑145 (MQ=255)                                                                 ggTGAGCGAACTGCTGGTTTTGATGGGTGAGCGTTTTGAAGTGGTGGTGGAGGTTAACGATAACAAACCCTTTGACCGGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGa                                                                           <  1:22456/149‑1 (MQ=255)                                                                      gCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGAGAACAAACGCCGTGACGGGATGGAGCGTCCACGGAGCCGGAGAGGTCGGGCGTCGGCGCCTTTTTATAAGACACATCCGGTAATGCGGATACAg                                                                      >  2:714239/1‑149 (MQ=255)                                                                                ggTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTa                                                            >  1:124847/1‑149 (MQ=255)                                                                                   gcggATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTa                                                         <  1:323883/146‑1 (MQ=255)                                                                                      gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGa                                                                                                                           <  1:507550/80‑1 (MQ=255)                                                                                      gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGa                                                                                                                           >  2:507550/1‑80 (MQ=255)                                                                                      gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGGAGTGCGGGTTCAGCCGATTGCTATTAGTg                                                      >  2:703649/1‑149 (MQ=255)                                                                                           gCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTcc                                                 >  1:597543/1‑149 (MQ=255)                                                                                                    ttGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCCTTTGATAACCCTCACCCGGTAATCCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTg                                        <  2:272735/149‑1 (MQ=255)                                                                                                    ttGAAGTGCCGGGGGAGGTTAACGATAACAAACCCTTTGACCGGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTg                                        <  2:782398/149‑1 (MQ=255)                                                                                                      gAAGTGCTGGTGGAGGTTAACGATAACAAACTCTTTGACCTGGTGACGCTGCCGGTCAGCCCGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGcc                                      <  2:125882/149‑1 (MQ=255)                                                                                                       aaGCGCTGGGGGGGGTTAACGATAGCAAACCCTTTGACCTGGTGACGGTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTTATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCa                                     <  2:117070/149‑1 (MQ=255)                                                                                                           gCTGGTGGACGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGaca                                 <  1:412577/149‑1 (MQ=255)                                                                                                               gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGcc                                                                                                        >  1:485078/1‑74 (MQ=255)                                                                                                               gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGcc                                                                                                        <  2:485078/74‑1 (MQ=255)                                                                                                               gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATCGCTATTAGTGCCTCCGGTGCTTTGCCAGACACAtt                             <  2:701697/149‑1 (MQ=255)                                                                                                                 gggggTTAACGATAGCTAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTaa                           <  1:102581/146‑1 (MQ=255)                                                                                                                                cAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGGTGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGGTTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGt            >  1:231936/1‑149 (MQ=255)                                                                                                                                cAAACCCTGTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGAGAAATTAAGGAGACTGCCTGCGt            >  2:630195/1‑149 (MQ=255)                                                                                                                                   aCCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTAc         >  1:80879/1‑149 (MQ=255)                                                                                                                                    cgcTTTGACCTGGTGACGCTGCCGGTCAGCTAGATGGGGATGGCGATCGCGCCGTTTGAGAAGCCTCAGCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTAcc        <  1:566890/147‑1 (MQ=255)                                                                                                                                     ccTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCt       >  1:515452/1‑149 (MQ=255)                                                                                                                                       ctggACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTCCCTTGCCAGACACATTACCTCGCACCCCTGCGTTAccctt     >  2:547237/4‑146 (MQ=255)                                                                                                                                        ttGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCg    <  1:229266/149‑1 (MQ=255)                                                                                                                                          gACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCt  <  2:189107/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                  CCAGCGACAATCGCCCGCTGTATGTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCT  >  NC_000913_3_bme_pgi/137825‑138110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.