| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | = 20563 | NA (NA) | 55 (0.940) | 47/298 | 0.2 | 98.2% | intergenic (‑55/+252) | insA/rpsT | IS1 repressor TnpA/30S ribosomal subunit protein S20 |
| ? | NC_000913_3_bme_pgi | = 61489 | 1 (0.020) | coding (1776/2907 nt) | rapA | RNA polymerase remodeling/recycling factor ATPase; RNA polymerase‑associated, ATP‑dependent RNA translocase | |||||
Only 100 of 118 total aligned reads displayed.
GTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAGCGCGGTCAC > NC_000913_3_bme_pgi/61347‑61637 | gTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatg > 1:500063‑M2/1‑143 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTa < 1:823653‑M1/19‑1 (MQ=255) gTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgcc < 2:360561‑M2/150‑13 (MQ=255) cGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGGCGACCAATACGCggtgatgctgccaa < 1:473688‑M2/150‑15 (MQ=255) atctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATc > 2:588002‑M1/128‑150 (MQ=255) gggCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGCGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGCGACGATCGAGCCGACCACTACGCggggaggcggccaac < 2:629275‑M2/150‑16 (MQ=255) gtgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacatagtcatcgggcattatctgaacttaaatcactatgattaagttggagtcattacCCAATACGCTGCTCCAGTAGATCCg > 1:241644‑M1/126‑150 (MQ=255) ggCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaact > 1:279941‑M2/1‑134 (MQ=255) tgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCgg > 1:67021‑M1/125‑150 (MQ=255) gaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcattacCCAATACGCTGCTCCAGTAGATCCggg > 1:464000‑M1/124‑150 (MQ=255) taggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaagtcatcgggcattttctgaacataatacactatcaataagtttgagtcattacCCAATACGCTGCTCCAGTAGATCcggga > 2:245686‑M1/123‑149 (MQ=255) ggcagcacctggcacggctgggacggaagtcgctgtcgttctaaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCAAATACGCTGCTCCAGTAGATCCGGGtt < 1:737228‑M1/29‑1 (MQ=255) gcagcacctggcacggctgggacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagttggagtcataacCCAATACGCTGCTCCAGTAGATCCGggtgg > 2:405170‑M1/121‑148 (MQ=255) tgtgCTCAAATGCTTCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactga > 1:576294‑M2/1‑128 (MQ=255) gcacctggcacggcggggacggaagtcgctgtcgttctcaaaatcggtggagctgaatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAAt > 2:243410‑M1/118‑150 (MQ=255) gCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggggatgctgccaacttactgattt < 1:396508‑M2/150‑26 (MQ=255) cTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgcc > 1:96274‑M2/1‑124 (MQ=255) acctggcacggctgggacggaagtcgctgtcgttcgcaaaatcggtggagctgcatgacaaagtcagcgggcattatctgaacataaaacactagcaataagttggagtcattacCCAATACGCGGCTCCAGTAGATCCGGGTTGAATgg < 2:553632‑M1/35‑1 (MQ=255) tCAAATGCATCCAGACCTTAGTGATACCAGCGCACCAGCAGCGACTGAGCGGTTTTCTGCAGATAAGGCACATGGATCTGAGTATCGTGCGCCAGGCAGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttag > 2:783133‑M2/1‑123 (MQ=255) tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcattacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAg < 2:751526‑M1/38‑1 (MQ=255) ggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAgg > 1:198537‑M1/112‑150 (MQ=255) aTGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgta > 1:247664‑M2/1‑119 (MQ=255) cctccAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctggcaacgtagtgatttagtgtatgt < 2:941385‑M2/148‑35 (MQ=255) ctggtacggatgtagctgtccttctcataatcggtgtatctgcatgacattgtcatcggtcataatctgatcataaaacactatcaataagtttgagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACa > 1:399176‑M1/105‑150 (MQ=255) ctgggactgaagtcgctgtcgttctcaaaatctgtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACa > 2:402918‑M1/105‑150 (MQ=255) cggggacggaagtcgctgtcgttctcaaaagcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACa > 1:906647‑M1/105‑150 (MQ=255) gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCACTACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCACACATc < 2:335628‑M1/48‑1 (MQ=255) aGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtg > 2:706079‑M2/1‑111 (MQ=255) cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCa > 1:82533‑M1/99‑150 (MQ=255) cTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCTGATAAGGCACATTGTTCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 2:49120‑M2/1‑107 (MQ=255) tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGtggc < 1:334593‑M1/58‑1 (MQ=255) tACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 1:920547‑M2/150‑52 (MQ=255) ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacagtatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCAGGGTTGAATGGCAGGTCTAACATCACCATGTGGCtggcgcacg < 1:510421‑M1/67‑5 (MQ=255) ccAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttaatgattaagtgtatgatggtgtttttgaggtgctccagtggct < 1:518578‑M2/150‑62 (MQ=255) cAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt > 2:870626‑M2/1‑88 (MQ=255) aaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGt < 2:853471‑M1/73‑1 (MQ=255) cACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCGGGCCGATACGATCCAGACGACCAATACGCggtgatgcggccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctg > 2:272886‑M2/1‑85 (MQ=255) ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGt > 2:823653‑M1/73‑150 (MQ=255) ggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGt > 2:900462‑M1/73‑150 (MQ=255) gACTGAGCGGGTTTCTCCAGATAAGGCACATGGATCTGAATATCCTGCGCCCGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc > 2:692898‑M2/1‑81 (MQ=255) gtggagctgcatgacaaagtcatcgggcattatctgaacattaaacactatcaataagttggagtcattacCCAATACGCTGCTCAAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGGGAACTTGAAGTTACgtg < 2:764503‑M1/79‑2 (MQ=255) gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTc < 2:544992‑M1/79‑1 (MQ=255) gtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCAGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTc < 2:586737‑M1/79‑1 (MQ=255) tGAGCGGTTTGCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat > 1:143040‑M2/1‑78 (MQ=255) gctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATACGGGTTGATTGGCAGGTCAAACATCGCCATGTGGCTGGCGAACTGGAAGTTACGTCGTTCa < 2:30218‑M1/84‑1 (MQ=255) ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAg < 1:25558‑M1/85‑1 (MQ=255) ggTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct < 1:13101‑M2/150‑78 (MQ=255) ggTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCAGGCCGATACGATCCAGACGCCCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtatttgaggtgctccagaggcatctgtttctatcagct < 2:69138‑M2/150‑78 (MQ=255) tcCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggtgctccagtggcttctgtttctatcagctgtccctc < 1:815463‑M2/150‑85 (MQ=255) tcCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggtgctccagtggcttctgtttctatcagctgtccctc < 1:812464‑M2/150‑85 (MQ=255) aTAAGGCTCATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt > 1:80367‑M2/1‑61 (MQ=255) aTAAGGCACATGGATCAGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt < 2:301907‑M2/150‑90 (MQ=255) atcgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGc < 2:912939‑M1/100‑1 (MQ=255) cgggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGcac < 1:916921‑M1/102‑1 (MQ=255) gtgcattatctgaacataaaacactatcaataagttgtagtcattacACAATACGCTGCTCCAGTAGATCCTGCTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGcaca > 1:764503‑M1/48‑150 (MQ=255) gggcattatctgaccataaaacactaacaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCAGGGATGAATGGCAGGTCACACATCACCCTGTGGCTGGCGCACTGGCAGATACGTCCTTCAGAACCGATGTCTGAgcacc < 2:523102‑M1/103‑2 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGcaca < 2:816383‑M1/103‑1 (MQ=255) gggcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGcaca > 1:586737‑M1/48‑150 (MQ=255) gcattatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGAAGATCCGGGTTGAATCGCAGGACAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCAcagc < 2:24450‑M1/105‑1 (MQ=255) aTGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg < 1:748998‑M2/150‑99 (MQ=255) tatctgaacataaaacactctcaataagttggagtcattacCCACTACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTa > 2:216427‑M1/42‑150 (MQ=255) tatctgaacataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTa > 1:853471‑M1/42‑150 (MQ=255) aTCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg > 1:657785‑M2/1‑48 (MQ=255) cTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctgctgttcagctactgacgggg < 1:129165‑M2/150‑105 (MQ=255) ataaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTgcgc < 1:367309‑M1/118‑1 (MQ=255) taaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGCACCGATTTCTGAGCACAGCAGTACCTGTGCGcc < 1:741804‑M1/119‑1 (MQ=255) aaaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCg > 2:25558‑M1/31‑150 (MQ=255) aaacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCgg > 2:785314‑M1/30‑150 (MQ=255) aacactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACAGATTTCTGAGCACAGCAGAACCTGTGCGCCGgt < 2:756871‑M1/122‑1 (MQ=255) cactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTTGCGAACTGGAAGTTACGTCCTTCAGCGCCGAGTTCTGAGCACCGCAGTGCCTGTGCGCCGgtgt < 2:55212‑M1/124‑1 (MQ=255) cactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGACCCGATTTCTGAGCACAGCAGTACCTGTGCGCAggtgg < 2:680047‑M1/124‑2 (MQ=255) cactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGgtgt < 1:705635‑M1/124‑1 (MQ=255) cactatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACAGATTTCTGAGCACATCAGTACCTGTGCgccggagg < 2:146576‑M1/124‑4 (MQ=255) cacaatcaataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGTCGAACAGGAAGTTACTTCATACAGAACCGATTTCAGAGCACCGCAGTACCTGACCGCCGgtgt < 2:843530‑M1/124‑1 (MQ=255) cgcCTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg < 2:343833‑M2/150‑117 (MQ=255) cTGGCCGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggca < 1:488372‑M2/150‑120 (MQ=255) caataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTcttctt < 2:235813‑M1/130‑1 (MQ=255) gCCGATACGATCCAGACGGCCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaa > 1:344409‑M2/1‑28 (MQ=255) ccGATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaag < 1:539552‑M2/150‑124 (MQ=255) ataagttggagtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCg < 1:811914‑M1/132‑1 (MQ=255) gATACGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca > 2:287072‑M2/1‑25 (MQ=255) cGATCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcccgtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc < 1:445570‑M2/150‑130 (MQ=255) aTCCAGCCGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg < 2:300960‑M2/150‑132 (MQ=255) aTCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg < 2:466872‑M2/150‑132 (MQ=255) tCCAGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg < 1:241566‑M2/150‑133 (MQ=255) gtcattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAgg > 1:235813‑M1/9‑150 (MQ=255) cattacCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAggcg > 2:334593‑M1/7‑150 (MQ=255) aGACGACCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggaca > 2:920547‑M2/1‑15 (MQ=255) gacgaaCAATACGCggtgatgctgccaactaactcaattagtgtatgatgttgtttttcaggtgctccagtggcttctgtttctatcagctgtccctcctgttcaactactgacggggtgttgcgtaacggcaaaagcaccgcctgacat < 2:727455‑M2/150‑137 (MQ=255) acgacCAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgggtgctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc > 1:539564‑M2/1‑13 (MQ=255) acCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAACCATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAg < 2:921663‑M1/148‑1 (MQ=255) acCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAg < 1:465851‑M1/148‑1 (MQ=255) acCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAg > 1:734864‑M1/3‑150 (MQ=255) acCCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCAAAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAg < 2:437146‑M1/148‑1 (MQ=255) cAATACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttcaggagctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtcccggcaaaagcaccgccggccatcagcgc < 1:429654‑M2/150‑143 (MQ=255) aTACGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgcta < 1:570933‑M2/150‑145 (MQ=255) aTACGCTGCTCCAGTAGATCCGGGTGGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAGCGCgg < 2:941083/150‑1 (MQ=255) aCGCggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc > 1:124561‑M2/1‑4 (MQ=255) cgcggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatct < 1:193251‑M2/150‑148 (MQ=255) gcggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagtaccgccggacatcagcgctatctc > 2:473688‑M2/1‑2 (MQ=255) | GTCCGGTCGGGCAGGTGTGCTCAAATGCATCCAGACCTTCGTGATACCAGCGCACCAGCACCGACTGAGCGGTTTTCTCCAGATAAGGCACATGGATCTGAATATCGTGCGCCTGGCCGATACGATCCAGACGACCAATACGCTGCTCCAGTAGATCCGGGTTGAATGGCAGGTCAAACATCACCATGTGGCTGGCGAACTGGAAGTTACGTCCTTCAGAACCGATTTCTGAGCACAGCAGTACCTGTGCGCCGGTGTCTTCTTCGGCAAACCAGGCGGCAGCGCGGTCAC > NC_000913_3_bme_pgi/61347‑61637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |