Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913_3_bme_pgi | 526,792 | 0 | A | C | 25.4% | 99.5 / 39.1 | 69 | S1178R (AGC→CGC) | rhsD | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
Reads supporting (aligned to +/- strand): ref base A (24/26); new base C (6/11); total (32/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.10e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.17e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
TGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCA > NC_000913_3_bme_pgi/526645‑526934 | tGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAg > 1:114198/1‑149 (MQ=255) gCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGTGACTGCCGCTGGCGCTTCTCAGCGCAGACGGCCCAACGCCGTGGcgcg > 2:96517/1‑149 (MQ=14) ttGCGCAGTGCGGGCTGACGGTGGAGCACCTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCCCTGGCACTTATATGAGTAGTCGGCAATCCGGCGGAGGGcgcg > 2:353375/1‑149 (MQ=14) ttGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGcgcggg < 2:633563/149‑3 (MQ=255) cggaagtgagtgCTGACGGCGGAAGCCCTGGCCAGGCCAGTTGAGCCGGACTATACCCCTGCGCCAAAAGCTCCTCTTTCTCACGGG‑GACCACCGGTGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGa < 2:318206/145‑1 (MQ=2) aGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAgtat < 1:202799/149‑1 (MQ=255) tGCGGGCTGACCGTGGAGCAACTGGCCAGGCAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTatga < 1:226576/149‑1 (MQ=11) ggCGGGCTGACGGTGGAGCAACTGGCCAGACACGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GAGCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATatga < 1:22321/148‑1 (MQ=255) tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATgg < 2:716864/149‑1 (MQ=255) tGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATgg > 1:413472/1‑149 (MQ=255) aCGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATgggg > 1:446590/1‑149 (MQ=255) ggTGGAGCAAATGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCa > 1:465848/1‑149 (MQ=255) gTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCGTCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCaa > 1:475294/1‑149 (MQ=255) gggaggaACTGGCCAGACAGGTGAAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAc < 1:716215/148‑1 (MQ=11) ggAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGCCGGCAATACGGCGTGGAGCGCGGAATATGATGACTGGGGCaaac > 2:280020/1‑147 (MQ=255) gCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGc < 1:387312/149‑1 (MQ=255) cAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCCGCt < 2:590809/149‑1 (MQ=11) gCCAGAGNGGTGGCGGCGGGATACACGCCGGNGAGAAAAGCTCTTCTTNAGCNCTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCGGCGATGAGGGCNATAAGGCGTGGAGCGCGGAATATGATGTATGTGGCAACCAGCTTAATga < 2:44589/149‑1 (MQ=255) gCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATga < 2:378334/149‑1 (MQ=255) ccAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgag < 1:493193/149‑1 (MQ=255) ccAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgag < 2:658771/149‑1 (MQ=255) cAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgagg > 1:604746/1‑149 (MQ=255) cAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgagg < 1:421059/149‑1 (MQ=255) cAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACGGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgagg < 2:165111/149‑1 (MQ=255) acaCAGGTGGAGCCGGAATACACACCGGCGCGAAAAGTTCATCTTTATTCCTTC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgagga < 1:353252/147‑1 (MQ=255) aGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATgagga > 2:579323/1‑149 (MQ=255) aGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATgagga < 2:297279/149‑1 (MQ=255) cAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGcgcg < 2:35071/111‑1 (MQ=255) cAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGcgcg > 1:35071/1‑111 (MQ=255) aGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAAc < 2:186003/149‑1 (MQ=255) aGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAATCAGCTTCACGAGGAGAAc > 1:677962/1‑149 (MQ=255) ggTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAcc > 2:134246/1‑149 (MQ=255) gTGGAGCCGGAATACACGCCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc < 2:603953/149‑1 (MQ=255) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAc > 2:559058/1‑129 (MQ=255) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAAc < 1:559058/129‑1 (MQ=255) gTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc > 2:305804/1‑149 (MQ=255) tGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATCCGACGCGCTGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCg > 1:602085/1‑149 (MQ=17) gCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGGGTATGATGAATGGGGCAACAGGCTTAATGAGGAGAACCCGcatc > 1:94766/1‑149 (MQ=11) cGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGcatcat < 2:161852/149‑1 (MQ=255) cGGAAGACACACCGGGGTGAAAAGCTCATCTTTATCACGGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGCGCGGGGAGTATGATGAATGGGCCAACCAGCTTAATGAGGAGAACCCGcatcac < 1:346563/149‑2 (MQ=11) gAATACACACCGGCGCGAAACGCTCATCTTTATCACTGC‑GACCACCAGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCAtgt > 1:492338/1‑149 (MQ=255) gAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGTGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCAtgt < 2:84902/149‑1 (MQ=255) gAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCAtgt < 1:228305/149‑1 (MQ=255) aTACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATgtgt < 1:134246/149‑1 (MQ=255) acacCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCa > 1:198318/1‑149 (MQ=255) cacCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc > 2:158651/1‑133 (MQ=255) cacCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAAccc < 1:158651/133‑1 (MQ=255) acCGGCGCGAAAAGCTCATCTTTATCACAGCAGGGCTTC‑CATACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGc > 1:571649/1‑149 (MQ=18) ccGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCAGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGcc < 2:492338/149‑1 (MQ=255) gcgcGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTa > 1:106466/1‑149 (MQ=255) gcATCTTTATCACTGC‑GATCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAg < 1:520648/148‑1 (MQ=255) aTCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATGTGATGAATGGGGCAATCAGCTTAACGAGGAGAACCCGGATCATGTGTATGAGCCGTACGGTCTGCAAggg > 2:650608/1‑149 (MQ=18) cTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGTTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGgca < 1:751161/149‑1 (MQ=255) tttATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACTGCGTTGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCGTCATGTGTATTAACCGTACCGTCTGCCAGGgcag > 2:321040/1‑149 (MQ=17) tGC‑GACCACCGGGGACTGCCGCAGGCGCTTATCCGCGGAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCCACCAGCTTATTGAGGAGGACCCACATCATGGGTAACAGCCGTACCAGCTGCCAGGGCAGCGGCatga > 2:693478/1‑149 (MQ=255) gACCACCGGGGACGGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCAtgatga < 2:114198/149‑1 (MQ=255) caccGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGa > 1:1296/1‑149 (MQ=255) gggACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAg > 1:670255/1‑149 (MQ=255) gggACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGCCAGCAGCATGATGAGGAATCAg > 2:430801/1‑149 (MQ=255) ggACTGCCGCTGGGGCATATGAGCGAAGTAGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTAGCGGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAgg < 2:262800/149‑1 (MQ=17) gACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAggg < 2:198318/149‑1 (MQ=255) cTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACta > 1:421005/1‑149 (MQ=255) tGGCGTTTATCACCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACtat < 1:118338/149‑1 (MQ=255) tGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACtat > 1:33126/1‑149 (MQ=255) cgcTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAAc < 1:531610/149‑1 (MQ=255) gcTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGCATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAAcc > 1:427783/1‑149 (MQ=255) aTCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAAACGTCa > 2:266422/1‑149 (MQ=255) ggCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGa > 1:39911/1‑149 (MQ=255) aCGGCTTGGAGCGCGGAATATGAAGAATGGGGCAACCAGCTTACTCAGTCGTACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGtt < 1:722874/149‑1 (MQ=17) cGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTg < 1:167885/149‑1 (MQ=255) gCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGAGCAGCAGCAGGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCa < 1:149224/149‑1 (MQ=255) | TGGCTTGCGCAGTGCGGGCTGACGGTGGAGCAACTGGCCAGACAGGTGGAGCCGGAATACACACCGGCGCGAAAAGCTCATCTTTATCACTGC‑GACCACCGGGGACTGCCGCTGGCGCTTATCAGCGAAGACGGCAATACGGCGTGGAGCGCGGAATATGATGAATGGGGCAACCAGCTTAATGAGGAGAACCCGCATCATGTGTATCAGCCGTACCGTCTGCCAGGGCAGCAGCATGATGAGGAATCAGGGCTGTACTATAACCGTCACCGGTACTACGATCCGTTGCA > NC_000913_3_bme_pgi/526645‑526934 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |