Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913_3_bme_pgi3,781,1400AG23.0% 350.0 / 22.7 175intergenic (+123/‑75)lldD/trmLL‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base A (88/46);  new base G (0/40);  total (89/86)
Fisher's exact test for biased strand distribution p-value = 1.37e-15
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 181 total aligned reads displayed.

CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAC  >  NC_000913_3_bme_pgi/3781042‑3781239
                                                                                                  |                                                                                                    
      ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg                                                                                                   <  2:2625047/96‑1 (MQ=255)
      ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑gg                                                                                              >  1:815208/1‑100 (MQ=255)
       cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTTAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑ggg                                                                                             <  1:3740967/100‑1 (MQ=255)
       cTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑ggg                                                                                             <  2:400061/100‑1 (MQ=255)
        tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑ggg                                                                                             >  2:1270271/1‑99 (MQ=255)
          aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑gggg                                                                                            <  2:4143047/98‑1 (MQ=255)
          aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑gggg                                                                                            <  2:621058/98‑1 (MQ=255)
            ggggagGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAg                                                                                        <  2:3631403/97‑1 (MQ=255)
            ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAg                                                                                        <  2:4044985/100‑1 (MQ=255)
             gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg                                                                                       >  1:3928733/1‑100 (MQ=255)
             gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg                                                                                       <  1:1663515/100‑1 (MQ=255)
             gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAgg                                                                                       >  1:2227977/1‑100 (MQ=255)
              aggggggACCGTTCGGCGCTGTATGTACTCCCTCTCTCTGAAACGACACCGCACGCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑AGGGTGAggg                                                                                      <  2:2333351/97‑1 (MQ=39)
                 ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa                                                                                    >  1:3922593/1‑99 (MQ=255)
                 ggggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGa                                                                                    >  2:3148780/1‑99 (MQ=255)
                   ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGaaaa                                                                                 <  1:811158/100‑1 (MQ=255)
                    gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAg                                                                                >  1:3655610/1‑100 (MQ=255)
                    gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAg                                                                                <  1:4095866/100‑1 (MQ=255)
                      ccGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGc                                                                              >  2:586564/1‑100 (MQ=255)
                       cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGcc                                                                             >  1:1138472/1‑100 (MQ=255)
                        gTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGACAAGGCCg                                                                            >  2:466114/1‑100 (MQ=255)
                            ggCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACt                                                                        >  1:2495871/1‑100 (MQ=255)
                               gcTGTATGTACTCCCTCACTCGGAAACGGCACCGCACTCTTTTTTTCCCCCGCGCCCCCCCGGGGGGGGGGCC‑GGGGTGAGGGGAAAAGGCCGCAc                                                                         <  2:2140085/96‑1 (MQ=255)
                                 tgtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTATCCCTCGCCCCTCCGGGGAGACGGCC‑GGGGTGAGGAGAAAAGGCCGCACTGCCCa                                                                   >  2:4002380/1‑100 (MQ=255)
                                   gatgtaCCCCCTCACTCTGAAACGCCACCGCCCGCTTTTTTCCGCCCGCGCCCCCCCGGGGGGAGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCAcc                                                                 <  2:351294/99‑1 (MQ=255)
                                        aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt                                                            >  2:3356769/1‑100 (MQ=255)
                                         cTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt                                                           >  1:1738556/1‑100 (MQ=255)
                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt                                                         >  1:3017729/1‑100 (MQ=255)
                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt                                                         >  1:1838264/1‑100 (MQ=255)
                                           cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTAGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCCCAc                                                                  >  1:3815223/1‑91 (MQ=255)
                                            ccTCACTCTGAACCGACCCCGCTCTCTTTTTTTCCCCCTCGCCCCCCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTc                                                                    <  2:3013190/88‑1 (MQ=37)
                                            ccTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGGGAGGGCC‑GGGGGGAGGGGAAAAGGCCGCACTGCTCAcc                                                                 <  1:3784410/91‑1 (MQ=255)
                                                 ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                   >  1:1223753/1‑100 (MQ=255)
                                                 ctctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc                                                   >  1:1544754/1‑100 (MQ=255)
                                                    tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAATGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  <  2:2250231/98‑1 (MQ=255)
                                                    tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg                                                >  1:3453141/1‑100 (MQ=255)
                                                    ggAACCGACACCGCCCTCTTTTTTGCCCCCACGCCCCCCCGGGGGGGGGCCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  <  2:1902960/97‑1 (MQ=255)
                                                    ggAAACGACCCCGCACTCTTTTTTTCTCCGCCGCCCCTCCGGGGGGGGGGCC‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  <  2:3126098/97‑1 (MQ=255)
                                                     gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc                                               >  2:2235884/1‑100 (MQ=255)
                                                        aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                            >  1:554308/1‑100 (MQ=255)
                                                        aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                            >  1:1236646/1‑100 (MQ=255)
                                                        aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGACGCACTGCTCACCAATTTTCTGCTATCCTGccc                                             <  2:505254/99‑1 (MQ=255)
                                                           cccccGCCCCCTTTTTTTCCCCCGCGCCCCTCGGGGGGGGGGGCG‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc                                         <  1:1449656/97‑1 (MQ=255)
                                                            cacCGCACTCTTTTTTTTTTTTTTTCCCCTCCGGGGAGAGGGCC‑GGGGTGATGGGAAAAGTCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                        >  2:4491351/1‑100 (MQ=255)
                                                            cacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGCGGCGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGcc                                        >  2:2004749/1‑99 (MQ=255)
                                                             acCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGTGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                            >  2:3410304/1‑95 (MQ=255)
                                                              ccGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc                                       >  1:3331657/1‑99 (MQ=255)
                                                               cGCACTCTTTTTTTCCCCCCCGCCCCTCGGGGGGGGGGGCG‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc                                            <  1:4210720/93‑1 (MQ=255)
                                                               cGCACCCTTTTTTTCCCCCCCGCCCCTCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGc                                                       <  1:2930233/82‑1 (MQ=255)
                                                                gCACTCTTTTTTTCCCCCTCGCCCCTCCGGGGAGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTaa                                    <  1:735824/100‑1 (MQ=255)
                                                                     ctTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg                                >  2:1558734/1‑99 (MQ=255)
                                                                        tttttCTCCTTCGCCCTTCGGGGGGGGGGGCG‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc                                                  <  2:1949505/78‑1 (MQ=255)
                                                                        tttttCTCCCTCGCCCCCCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg                            >  2:3858231/1‑100 (MQ=255)
                                                                        tttttCCCCCCCGCCCCTCGGGGGGGGGGGCG‑GGGGTGGGGGGAAAAGGCCGCACTGCTCAc                                                                  <  1:2604983/62‑1 (MQ=255)
                                                                        tttttCCCCCCCGCCCCTCCGGGGAGAGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgg                                  <  1:3364981/94‑1 (MQ=255)
                                                                        ttttcCTCCCCCGCCCCTCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa                             <  1:3620249/99‑1 (MQ=255)
                                                                         ttttCGCCCGCGCCCCCCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg                            <  2:3209916/99‑1 (MQ=255)
                                                                          tttCTCCCTCGCCCCTCGGGGGGGGGGGCG‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt                           <  1:485105/99‑1 (MQ=39)
                                                                          tttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa                          >  1:2384898/1‑100 (MQ=255)
                                                                          tttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa                          >  1:2295892/1‑100 (MQ=255)
                                                                          nttCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAAGGGGCAGTa                          >  2:2200784/2‑100 (MQ=255)
                                                                           ttCTCCCTCCCCCCTCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa                          <  1:3153432/99‑1 (MQ=255)
                                                                            tctcCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg                        >  2:1053035/1‑100 (MQ=255)
                                                                             ctcCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       >  2:102753/1‑100 (MQ=255)
                                                                              tcCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       >  1:783026/1‑99 (MQ=255)
                                                                              ccccTCGCCCCCCCGGGGGGAGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt                         <  1:848407/96‑1 (MQ=255)
                                                                               cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       >  2:2062962/1‑98 (MQ=255)
                                                                               cccTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt                      >  1:4304285/1‑99 (MQ=255)
                                                                                ccccGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       <  1:4437981/94‑1 (MQ=255)
                                                                                ccccGCCCCGCGGGGGGGGGGGCC‑GGGTGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa                     <  1:2073826/96‑1 (MQ=255)
                                                                                ccccGCCCCCCGGGGGGGGGGGCC‑GGGGTGGGGGAAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       <  1:2771800/94‑1 (MQ=255)
                                                                                ccTCGCCCCCCCGGGGGGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa                    <  1:4122884/100‑1 (MQ=255)
                                                                                 cgcGCCCCTCCGGGGAGAGGGCC‑GGGTTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                   <  1:3407583/98‑1 (MQ=255)
                                                                                 cTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                   >  1:2767712/1‑100 (MQ=255)
                                                                                 cTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa                   >  1:1883578/1‑100 (MQ=255)
                                                                                    gCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt                >  1:3462018/1‑100 (MQ=255)
                                                                                     ccccTCGGGGGGGAGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg                               <  1:2996705/84‑1 (MQ=255)
                                                                                     ccccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc               >  1:2045088/1‑100 (MQ=255)
                                                                                     ccccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc               >  1:4182618/1‑100 (MQ=255)
                                                                                     ccccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc               >  1:3944275/1‑100 (MQ=255)
                                                                                      cccTCCGGGGGGGGGGCC‑GGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              <  2:2443807/100‑1 (MQ=255)
                                                                                      cccTCCGGGGGGAGGGCG‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              <  2:838366/100‑1 (MQ=255)
                                                                                      cccGCCGGGGAGGGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa                                        <  2:3757255/74‑1 (MQ=255)
                                                                                       cccgcGGGGGGGGGGCCTGGGGGGAGGGGAAAAGGCCGCACTGCTCACCATTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              <  1:4703460/96‑1 (MQ=255)
                                                                                       ccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              >  2:2521681/1‑99 (MQ=255)
                                                                                       ccTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg              >  1:511715/1‑99 (MQ=255)
                                                                                       ccTCCGGCGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCACACTAAGGGGGCAGTATGCTAAACATCg              >  2:4716377/1‑99 (MQ=255)
                                                                                        cTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa            >  1:3249055/1‑100 (MQ=255)
                                                                                           gggggggAGGGCG‑GGGGGGAGGGGAAAAGGCCGCACTGCTCa                                                                   <  2:1092844/41‑1 (MQ=255)
                                                                                           cGGGGGGGGGGCG‑GGGTCGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       <  1:602565/86‑1 (MQ=255)
                                                                                           cGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt         >  1:984143/1‑100 (MQ=255)
                                                                                           cGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt         >  1:3381783/1‑100 (MQ=255)
                                                                                             ggggGAGGGCC‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc                       <  2:3695807/84‑1 (MQ=255)
                                                                                             gggAGAGGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTAc           <  2:1194249/96‑1 (MQ=255)
                                                                                             gggAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa       >  1:4086242/1‑100 (MQ=255)
                                                                                             gggAGAGGGCC‑GGGGGGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt        <  2:3748914/99‑1 (MQ=255)
                                                                                              ggggagGGCC‑GGGGTGGGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc      <  2:1756613/97‑1 (MQ=255)
                                                                                              ggAGGGGGCG‑GGGGTGGGGGGAAAAGGCCGCACTGCTGACCAATTTTCTGCTATCCTGCCCCCGCGCTAAGGGGGCAGTATGCTAAAAATCGTACTTTAc      <  2:1956111/100‑1 (MQ=255)
                                                                                                agagGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg     >  1:1640466/1‑99 (MQ=255)
                                                                                                  agGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc  >  1:200658/1‑100 (MQ=255)
                                                                                                  |                                                                                                    
CCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCC‑GGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAC  >  NC_000913_3_bme_pgi/3781042‑3781239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑