New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1207790 =15 (0.080)152 (0.950) 90/164 0.1 92.0% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi 1209619 = 14 (0.090)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

Only 100 of 199 total aligned reads displayed.

GGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATG  >  NC_000913_3_bme_pgi/1209524‑1209718
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ctcactaccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcgttgagttttgctccttctcccaaaccaaCGtt                                                                                                  <  2:3643398‑M2/4‑1 (MQ=255)
ctcaataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGtt                                                                                                  >  1:451415‑M2/96‑99 (MQ=255)
  caataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                               >  2:1804766‑M2/94‑100 (MQ=255)
   aataccaccaatcataaccggtatagctatgaaaccggttcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                               >  2:4644800‑M2/93‑99 (MQ=255)
   aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccgaCGTTTa                                                                                                <  2:4703210‑M2/6‑1 (MQ=255)
   aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTa                                                                                                <  2:3448234‑M2/6‑1 (MQ=255)
   aataccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTAt                                                                                               <  1:2070451‑M2/7‑1 (MQ=255)
    ccATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGa                                                                                             <  2:2526415/100‑1 (MQ=255)
     taccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaa                                                                                            <  2:3104611‑M2/10‑1 (MQ=255)
       ccaccactcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgccccttctcccaaaccaaCGTTTATGa                                                                                             >  2:1946765‑M2/89‑97 (MQ=255)
       ccaccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGaaa                                                                                           <  1:3252587‑M2/11‑1 (MQ=255)
        caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                         <  2:389691‑M2/13‑1 (MQ=255)
        caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                         <  1:4318691‑M2/13‑1 (MQ=255)
        caccaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttactccttctcccaaaccaaCGTTTATGAAAAt                                                                                         >  1:1595293‑M2/88‑100 (MQ=255)
         accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAAt                                                                                         >  1:2749718‑M2/87‑99 (MQ=255)
         accaatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                        <  1:3616804‑M2/14‑1 (MQ=255)
            aatcataaccggtatagctatgaagccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaag                                                                                     <  2:4201276‑M2/17‑1 (MQ=255)
            aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaag                                                                                     <  1:2356870‑M2/17‑1 (MQ=255)
            aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaag                                                                                     <  2:1983734‑M2/17‑1 (MQ=255)
            aatcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATg                                                                                        >  1:1580192‑M2/84‑97 (MQ=255)
             atcataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATgaaga                                                                                    <  1:3007164‑M2/18‑1 (MQ=255)
               cataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTa                                                                                                >  1:2403206‑M2/81‑86 (MQ=255)
                ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                  >  2:3856996‑M2/80‑99 (MQ=255)
                ataaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGaaa                                                                                  >  2:497543‑M2/80‑99 (MQ=255)
                 taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATa                                                                                <  1:2042972‑M2/22‑1 (MQ=255)
                 taaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATa                                                                                <  1:751075‑M2/22‑1 (MQ=255)
                  aaccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATaa                                                                               >  2:4355280‑M2/78‑100 (MQ=255)
                   accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATaa                                                                               >  1:785404‑M2/77‑99 (MQ=255)
                   accggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAAc                                                                              <  1:1810371‑M2/24‑1 (MQ=255)
                    ccggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGACAATGAAGAAATAAc                                                                              >  2:2751790‑M2/76‑99 (MQ=255)
                      ggtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAg                                                                           <  1:1053058‑M2/27‑1 (MQ=255)
                       gtatagctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGc                                                                          <  2:2155823‑M2/28‑1 (MQ=255)
                           agctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAAt                                                                      >  1:996426‑M2/69‑100 (MQ=255)
                            gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAACTGAAGAACTAACAAGCAAAt                                                                      >  2:3842303‑M2/68‑99 (MQ=255)
                            gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                     <  1:3457605‑M2/33‑1 (MQ=255)
                            gctatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATg                                                                     >  1:1401214‑M2/68‑100 (MQ=255)
                              tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                    >  1:1419399‑M2/66‑99 (MQ=255)
                              tatgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATgg                                                                    >  1:4389297‑M2/66‑99 (MQ=255)
                              tatgaaaccggtgcgtcctaatgtagccgttgctccactgcgttttgctccttcccccacacccaCGTCTATGAAAATGCAGAAATAACAAGCAAAggg                                                                    >  2:4019141‑M2/66‑99 (MQ=255)
                               atgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                  >  2:239296‑M2/65‑100 (MQ=255)
                                tgaaaccggtgtgtccttatgtagccgtggctgcattgagttttgctccttctcacaaaccaaCGTTTATGAAAATGAAGAAATACCAAGCAAATGGcat                                                                 <  2:2246210‑M2/37‑1 (MQ=255)
                                tgaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                 >  1:3544906‑M2/64‑100 (MQ=255)
                                 gaaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcat                                                                 >  2:1458280‑M2/63‑99 (MQ=255)
                                  aaaccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                                               >  1:116844‑M2/62‑100 (MQ=255)
                                     ccggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                            >  1:3381610‑M2/59‑100 (MQ=255)
                                      cggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTcc                                                           <  1:4111856‑M2/43‑1 (MQ=255)
                                       ggtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCt                                                          <  2:3086164‑M2/44‑1 (MQ=255)
                                        gtgcgtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                         <  2:409836‑M2/45‑1 (MQ=255)
                                            gtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                     <  2:1217545‑M2/49‑1 (MQ=255)
                                            gtcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                     >  1:1140087‑M2/52‑100 (MQ=255)
                                             tcctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCtttt                                                    <  1:1449562‑M2/50‑1 (MQ=255)
                                               ctaatgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAc                                                  <  2:1882277‑M2/52‑1 (MQ=255)
                                                  atgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                                                 <  2:231900‑M2/53‑1 (MQ=255)
                                                   tgtagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgg                                              >  1:2963275‑M2/45‑100 (MQ=255)
                                                     tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                            <  1:503320‑M2/58‑1 (MQ=255)
                                                     tagccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAgggg                                            <  2:511039‑M2/58‑1 (MQ=255)
                                                       gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                          >  1:1282095‑M2/41‑100 (MQ=255)
                                                       gccgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                          >  1:1228860‑M2/41‑100 (MQ=255)
                                                         cgttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAtt                                        <  1:2072041‑M2/62‑1 (MQ=255)
                                                          gttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAttt                                       <  1:2579719‑M2/63‑1 (MQ=255)
                                                           ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                      <  1:3872384‑M2/64‑1 (MQ=255)
                                                           ttgctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                      <  1:1330889‑M2/64‑1 (MQ=255)
                                                              ntgcattgagttttgctacttctcccaaaccaaCGTTTATGAAAATGACGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:4597837‑M2/34‑100 (MQ=255)
                                                              ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTaa                                     >  2:3774066‑M2/34‑98 (MQ=255)
                                                              ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAAc                                    <  2:1267947‑M2/66‑1 (MQ=255)
                                                              ctgcattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:1111532‑M2/34‑100 (MQ=255)
                                                              ctgcattgagttttgctcattctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   <  2:1105649‑M2/67‑1 (MQ=255)
                                                              cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCATATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACa                                   >  1:3973080/1‑100 (MQ=255)
                                                               aaCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                  >  2:588107/1‑100 (MQ=255)
                                                                 cattgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATg                                 <  2:1356550‑M2/69‑1 (MQ=255)
                                                                 cattgagctttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACTAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACAt                                  <  1:4763700‑M2/68‑1 (MQ=255)
                                                                 cAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGc                                >  2:3981827/1‑100 (MQ=255)
                                                                  aGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                               <  1:454509/100‑1 (MQ=255)
                                                                   ttgagttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCt                               >  1:574465‑M2/29‑99 (MQ=255)
                                                                    gTAATGCAGAGCCTTCTCCCAAACCGACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCACCATTCCTGCCTTTACCAgg                                              >  2:4037300/1‑83 (MQ=255)
                                                                    gTAATGCAGAGCCTTCTACCAAGCCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCCGCTTTTACCAGGGGGATTTAACATGCTTa                             <  2:1653506/100‑1 (MQ=255)
                                                                      agttttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTAtt                           <  1:3476300‑M2/75‑1 (MQ=255)
                                                                          ttgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                        <  2:1508618‑M2/78‑1 (MQ=255)
                                                                           tgctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCt                       <  2:2054564‑M2/79‑1 (MQ=255)
                                                                           agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                      <  1:1689363/100‑1 (MQ=255)
                                                                            gctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                        >  2:3821304‑M2/20‑97 (MQ=255)
                                                                            gctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt                     >  2:965582‑M2/20‑100 (MQ=255)
                                                                            gctccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt                     >  2:3394681‑M2/20‑100 (MQ=255)
                                                                            gcgCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTa                      <  2:2780676/97‑1 (MQ=255)
                                                                               ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                  >  1:3820490‑M2/17‑100 (MQ=255)
                                                                                cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTa                  <  2:783114‑M2/84‑1 (MQ=255)
                                                                                cttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAc                 >  2:263721‑M2/16‑100 (MQ=255)
                                                                                   ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg                <  1:4207729‑M2/86‑1 (MQ=255)
                                                                                   ctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcg                <  2:4549303‑M2/86‑1 (MQ=255)
                                                                                    tcccaaaccaaCGCTTATGCAAATGAAGACATAACAAGCAAATGGCATCATTCCTGCTTTCACCAGGGGCATTTAACAAGCTTATTGCCTATGTAcgc               >  2:2414715‑M2/12‑98 (MQ=255)
                                                                                     cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa            >  2:3020845‑M2/11‑100 (MQ=255)
                                                                                     cccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTa            >  2:864877‑M2/11‑100 (MQ=255)
                                                                                      ccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTAcgcg              <  1:2842892‑M2/88‑1 (MQ=255)
                                                                                        aaaccaaCGTTTATGAAGATGAAGAATTAACGAGCAAATGGCATCATTCCTGCTTTTACCAGGGTGATTtaan                                    <  2:4514268‑M2/66‑2 (MQ=255)
                                                                                            caaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATcaaca      >  1:1966951‑M2/4‑99 (MQ=255)
                                                                                              aCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt   <  1:1294794‑M2/99‑1 (MQ=255)
                                                                                               cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt   >  2:1532609/1‑99 (MQ=255)
                                                                                               cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt   >  2:4128867/1‑99 (MQ=255)
                                                                                               cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg  <  1:2836803/100‑1 (MQ=255)
                                                                                               cGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg  <  2:1278255/100‑1 (MQ=255)
                                                                                               |                                                                                                   
GGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATG  >  NC_000913_3_bme_pgi/1209524‑1209718

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.