New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 2258692 =168 (0.880)20 (0.110) 16/188 16.6 10.4% coding (605/942 nt) psuK pseudouridine kinase
?NC_000913_3_bme_pgi 2258736 = 183 (0.990)coding (561/942 nt) psuK pseudouridine kinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 169 total aligned reads displayed.

CTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTC  >  NC_000913_3_bme_pgi/2258593‑2258790
                                                                                                   |                                                                                                  
   atatCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGc                                                                                                  <  2:864799/99‑1 (MQ=255)
   atatCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGc                                                                                                  <  1:1699888/99‑1 (MQ=255)
      tCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTg                                                                                              <  1:3380354/100‑1 (MQ=255)
      tCGCTGTAAGAAACGCCGTAGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACg                                                                                                   <  2:4426762/95‑1 (MQ=255)
       cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGa                                                                                             >  1:715282/1‑100 (MQ=255)
       cGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGa                                                                                             >  1:1874300/1‑100 (MQ=255)
        gCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGa                                                                                             >  1:1652936/1‑99 (MQ=255)
        gCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGAc                                                                                            <  2:4486705/100‑1 (MQ=255)
         cTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGa                                                                                             >  2:794017/1‑98 (MQ=255)
         cTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGa                                                                                             >  1:1634908/1‑98 (MQ=255)
            taataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAg                                                                                          <  1:2189562/98‑1 (MQ=255)
              ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgcgc                                                                                       <  1:2380733/99‑1 (MQ=255)
              ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgcgc                                                                                       <  1:829752/99‑1 (MQ=255)
              ataaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgcgc                                                                                       <  1:830142/99‑1 (MQ=255)
               taaACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAgcgc                                                                                       >  2:2675828/1‑98 (MQ=255)
                aaaCGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAAt                                                                                    >  2:3509134/1‑100 (MQ=255)
                  aCGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATcc                                                                                  >  2:2324489/1‑100 (MQ=255)
                         cgccgcCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGACCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACCCAg                                                                           >  2:4597764/1‑100 (MQ=255)
                          gccgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCTACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAg                                                                           <  2:2836069/99‑1 (MQ=255)
                          gccgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAgg                                                                          >  2:1394869/1‑100 (MQ=255)
                          gccgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAgg                                                                          >  1:1105482/1‑100 (MQ=255)
                            cgccCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAggg                                                                         <  2:1868486/99‑1 (MQ=255)
                               ccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTc                                                                     <  2:2252972/100‑1 (MQ=255)
                               ccATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTc                                                                     >  1:96531/1‑100 (MQ=255)
                                cATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCACACTCAGCGTTTcc                                                                    >  2:3685505/1‑100 (MQ=255)
                                cATGCTCAATACCAGGCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTcc                                                                    <  1:4550510/100‑1 (MQ=255)
                                    cTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCtt                                                                >  2:3927068/1‑100 (MQ=255)
                                      cAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTc                                                               >  2:4108224/1‑99 (MQ=255)
                                      cAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTc                                                               >  1:4146200/1‑99 (MQ=255)
                                       aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTc                                                               <  1:1077057/98‑1 (MQ=255)
                                       aaTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCaa                                                             <  2:1647798/100‑1 (MQ=255)
                                        aTACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAg                                                            >  2:1221490/1‑100 (MQ=255)
                                           ccAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGc                                                          <  2:527638/99‑1 (MQ=255)
                                           ccAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGc                                                          <  2:3575569/99‑1 (MQ=255)
                                            cAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCgg                                                        >  1:1081755/1‑100 (MQ=255)
                                             aGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGt                                                       <  1:2390500/100‑1 (MQ=255)
                                              gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGtt                                                      >  2:2656520/1‑100 (MQ=255)
                                              gTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGtt                                                      >  1:47686/1‑100 (MQ=255)
                                                 ggTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                   >  2:2129625/1‑100 (MQ=255)
                                                 ggTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTgg                                                   <  2:3131384/100‑1 (MQ=255)
                                                 ggTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTg                                                    <  1:3152551/99‑1 (MQ=255)
                                                  gTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCgg                                                        <  1:1171980/94‑1 (MQ=255)
                                                   ttCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCt                                                 <  1:1580568/100‑1 (MQ=255)
                                                     cAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCtt                                                >  2:1914896/1‑99 (MQ=255)
                                                     cAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGATTCAGCTTCAAGGCGGTTTGGCtt                                                >  2:4691816/1‑99 (MQ=255)
                                                       ggCCATGTTGATGGAACCAGGCAGCAACTATTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTgag                                             <  1:3699933/100‑1 (MQ=255)
                                                        gCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTGACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTAGGCTTga                                              >  1:4380312/1‑98 (MQ=255)
                                                            tGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAgtgt                                        <  2:3022630/100‑1 (MQ=255)
                                                            tGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAgtgt                                        >  1:2755100/1‑100 (MQ=255)
                                                             gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                       >  2:3933087/1‑100 (MQ=255)
                                                             gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                       >  1:1538999/1‑100 (MQ=255)
                                                             gTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                       >  1:4661816/1‑100 (MQ=255)
                                                              ttGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                       <  1:4292120/99‑1 (MQ=255)
                                                              ttGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGtgtg                                       <  1:2194154/99‑1 (MQ=255)
                                                                gATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                    >  2:1215207/1‑100 (MQ=255)
                                                                gATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                    >  2:3423293/1‑100 (MQ=255)
                                                                gATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                    >  1:1384692/1‑100 (MQ=255)
                                                                gATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGAt                                    >  2:4283107/1‑100 (MQ=255)
                                                                 aTGGAACCAGGCAGCAACTTTTGCCACATTTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATc                                   <  1:3703219/100‑1 (MQ=255)
                                                                 aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATc                                   <  2:4161471/100‑1 (MQ=255)
                                                                 aTGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATc                                   <  1:2447500/100‑1 (MQ=255)
                                                                    gAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGa                                >  1:2529222/1‑100 (MQ=255)
                                                                    gAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGa                                >  1:3325190/1‑100 (MQ=255)
                                                                    gAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGa                                >  1:3445174/1‑100 (MQ=255)
                                                                     aaCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAt                               >  1:802247/1‑100 (MQ=255)
                                                                     aaCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAt                               <  2:1668421/100‑1 (MQ=255)
                                                                      aCCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGagt                              >  2:3860660/1‑98 (MQ=255)
                                                                       ccAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAttt                             <  1:2665564/100‑1 (MQ=255)
                                                                       ccAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAttt                             <  1:628732/100‑1 (MQ=255)
                                                                       ccAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAtt                              >  2:4377607/1‑99 (MQ=255)
                                                                        cAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGAtt                              >  1:2175632/1‑98 (MQ=255)
                                                                        cAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTa                            <  1:1920881/100‑1 (MQ=255)
                                                                         aGGCAGCAACGTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAg                           <  2:3754539/100‑1 (MQ=255)
                                                                          ggCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGa                          >  1:1901745/1‑100 (MQ=255)
                                                                           gcagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                         >  1:2533697/1‑100 (MQ=255)
                                                                           gcagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                         <  2:601688/100‑1 (MQ=255)
                                                                           gcagcaACTTTTGCCACATCTTCACGCCCGGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                         <  2:1732814/100‑1 (MQ=255)
                                                                            cagcaACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGAc                         <  2:2720090/99‑1 (MQ=255)
                                                                                aaCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                    >  1:2017879/1‑100 (MQ=255)
                                                                                aaCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                    <  2:400333/100‑1 (MQ=255)
                                                                                aaCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                    <  2:2644784/100‑1 (MQ=255)
                                                                                aaCTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcg                    <  2:3605871/100‑1 (MQ=255)
                                                                                  cTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg                  <  1:1218856/100‑1 (MQ=255)
                                                                                  cTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg                  <  1:1225165/100‑1 (MQ=255)
                                                                                  cTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTcgcg                  >  2:1787866/1‑100 (MQ=255)
                                                                                      tGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGGGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt              >  2:4608480/1‑100 (MQ=255)
                                                                                      tGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCAc               <  1:4559608/99‑1 (MQ=255)
                                                                                      tGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACt              >  2:2953812/1‑100 (MQ=255)
                                                                                        ccACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt            <  1:2772998/100‑1 (MQ=255)
                                                                                         cacaTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACttt            >  2:4336199/1‑99 (MQ=255)
                                                                                         cacaTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTg           <  2:484264/100‑1 (MQ=255)
                                                                                         cacaTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGCTTGGCGTGAGAGTGTGGCTCTGATTTCGACg                        >  2:4335912/1‑87 (MQ=255)
                                                                                          acaTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGa          <  1:111241/100‑1 (MQ=255)
                                                                                           caTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGac         <  1:3013030/100‑1 (MQ=255)
                                                                                           caTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGac         <  2:2749523/100‑1 (MQ=255)
                                                                                           caTCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGac         <  2:2231822/100‑1 (MQ=255)
                                                                                               ttCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACAt     >  2:4100195/1‑100 (MQ=255)
                                                                                                 cACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGacac       <  1:1127654/96‑1 (MQ=255)
                                                                                                 cACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGAcaca      <  1:3942816/97‑1 (MQ=255)
                                                                                                  aCGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTc  <  1:1550731/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
CTGATATCGCTGTAATAAACGCCGTCGCCGCCCATGCTCAATACCAGTCGGTTCAGGCCATGTTGATGGAACCAGGCAGCAACTTTTGCCACATCTTCACGCCCTGACAGCGCAATCCCACTCAGGGTTTCCGCTTCAAGGCGGTTTGGCTTGAGAGTGTGGATCTGATTTAGACGGTCGCGCACTTTGACACATTTC  >  NC_000913_3_bme_pgi/2258593‑2258790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.