Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913_3_bme_pgi 1,978,503 Δ776 bp insB1insA insB1, insA

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_bme_pgi 1978503–1979270 1979278 9–776 164 [0] [1] 162 insB1–insA insB1,insA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 19785020 (0.000)151 (0.860) 91/180 0.2 100% intergenic (‑305/+16) flhD/insB1 flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
?NC_000913_3_bme_pgi 1979279 = 0 (0.000)intergenic (‑64/‑474) insA/uspC IS1 repressor TnpA/universal stress protein

Only 100 of 164 total aligned reads displayed.

CTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913_3_bme_pgi/1978403‑1978597
                                                                                                   |                                                                                               
cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG                                                                                                 <  2:3509095‑M1/100‑1 (MQ=255)
cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG                                                                                                 <  2:3158981‑M1/100‑1 (MQ=255)
cTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATG                                                                                                 >  2:1503920‑M1/1‑100 (MQ=255)
    aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtat                                                                                              >  1:2074011‑M1/1‑96 (MQ=255)
    aCTCGTCACTACACGCACATACAACGGAGGGGGGCCGCGAATTTCAATAATGCGTGATGCAGATCACACAAAAAACTCAATTACTTAACATAAATGtat                                                                                              >  2:1430217‑M1/1‑96 (MQ=255)
        gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtc                                                                                         <  2:4272367‑M1/100‑9 (MQ=255)
        gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                           <  1:438623‑M1/98‑7 (MQ=255)
           aCTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTTATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcata                                                                                      <  2:2853152‑M1/100‑12 (MQ=255)
            cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                     >  1:1239921‑M1/1‑88 (MQ=255)
            cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                     <  1:368381‑M1/100‑13 (MQ=255)
              acacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactt                                                                                   >  1:186833‑M1/1‑86 (MQ=255)
               cacGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttt                                                                                  <  2:4575450‑M1/100‑16 (MQ=255)
                 cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttg                                                                                <  1:2013301‑M1/100‑18 (MQ=255)
                 cGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttg                                                                                >  2:3511350‑M1/1‑83 (MQ=255)
                   cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              >  1:4082107‑M1/1‑81 (MQ=255)
                   cacaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              >  2:4646980‑M1/1‑81 (MQ=255)
                    acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              <  2:1114020‑M1/99‑20 (MQ=255)
                     caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                             >  2:3347942‑M1/1‑79 (MQ=255)
                     caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                             >  2:1538396‑M1/1‑79 (MQ=255)
                     caTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                             <  2:3116764‑M1/99‑21 (MQ=255)
                      aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttg                                                                           <  2:4467816‑M1/100‑23 (MQ=255)
                      aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttg                                                                           <  2:1615387‑M1/100‑23 (MQ=255)
                      aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtttt                                                                            >  2:2679398‑M1/1‑78 (MQ=255)
                       tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                          >  2:1043521‑M1/1‑77 (MQ=255)
                       tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                          >  2:3791307‑M1/1‑77 (MQ=255)
                       tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttg                                                                           >  2:1863143‑M1/1‑77 (MQ=255)
                       tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                             >  2:895671‑M1/1‑77 (MQ=255)
                       tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGAGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtgatacttttgttttgg                                                                          >  2:4499581‑M1/1‑77 (MQ=255)
                         cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                        <  1:3105426‑M1/100‑26 (MQ=255)
                         cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                        >  1:2383770‑M1/1‑75 (MQ=255)
                         cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                        <  2:2713023‑M1/100‑26 (MQ=255)
                         cAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttggtttgggt                                                                        <  2:4668493‑M1/100‑26 (MQ=255)
                         cAACGGAGGGGGGCTGCGATTTTAAATAATGCGTGATGCAGGTCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                              >  2:78935‑M1/1‑75 (MQ=255)
                           aCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtg                                                                       >  2:757508‑M1/1‑73 (MQ=255)
                           aCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggt                                                                        <  2:2854534‑M1/98‑26 (MQ=255)
                            cGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgta                                                                     >  1:3816612‑M1/1‑72 (MQ=255)
                             ggAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtat                                                                    >  1:4539738‑M1/1‑71 (MQ=255)
                              gAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatt                                                                   <  2:332885‑M1/100‑31 (MQ=255)
                                ggggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattt                                                                  >  1:4745564‑M1/1‑68 (MQ=255)
                                 gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCTATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                                 <  2:1428720‑M1/99‑33 (MQ=255)
                                 gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttc                                                                 <  1:3002132‑M1/99‑33 (MQ=255)
                                   gggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                               >  2:4149748‑M1/1‑65 (MQ=255)
                                      cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                           >  1:4672332‑M1/1‑62 (MQ=255)
                                      cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                           >  2:2366682‑M1/1‑62 (MQ=255)
                                      cTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctg                                                           >  2:81016‑M1/1‑62 (MQ=255)
                                        gCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgt                                                          >  1:4418348‑M1/1‑60 (MQ=255)
                                         cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                         >  1:2776157‑M1/1‑59 (MQ=255)
                                         cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAACTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                         >  1:4701459‑M1/1‑59 (MQ=255)
                                             tttCAATAATGAGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatactcttgttctgggtgtcttacaatctgtaaaagc                                                    >  1:3973750‑M1/1‑55 (MQ=255)
                                              ttCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaa                                                    <  2:2165282‑M1/99‑46 (MQ=255)
                                                 aataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttt                                                >  1:1934227‑M1/1‑51 (MQ=255)
                                                  ctaatgCGTTATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcagacttttgttttgggtgtatttcaatctgttaaaaagtttt                                               <  2:3769406‑M1/99‑51 (MQ=255)
                                                     atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc                                             <  2:1177399‑M1/99‑53 (MQ=255)
                                                     atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttc                                             <  1:2841621‑M1/99‑53 (MQ=255)
                                                         gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                        <  2:1923520‑M1/100‑58 (MQ=255)
                                                         gTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctac                                        <  2:1923902‑M1/100‑58 (MQ=255)
                                                           gATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                      >  2:4146968‑M1/1‑41 (MQ=255)
                                                           gATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                      >  2:2531177‑M1/1‑41 (MQ=255)
                                                            aTGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgct                                     <  2:2309195‑M1/100‑61 (MQ=255)
                                                             tGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgc                                      >  2:695080‑M1/1‑39 (MQ=255)
                                                               cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                                  <  1:1769494‑M1/100‑64 (MQ=255)
                                                               cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctag                                   <  2:2630602‑M1/99‑63 (MQ=255)
                                                               cAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctag                                   <  1:145296‑M1/99‑63 (MQ=255)
                                                                aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                                  >  2:2350401‑M1/1‑36 (MQ=255)
                                                                aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                                  >  2:669359‑M1/1‑36 (MQ=255)
                                                                aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagc                                  >  1:449343‑M1/1‑36 (MQ=255)
                                                                 gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcttcgctagc                                  >  1:2239240‑M1/1‑35 (MQ=255)
                                                                      cacaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                            >  1:107740‑M1/1‑30 (MQ=255)
                                                                         aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        <  1:3026801‑M1/100‑74 (MQ=255)
                                                                         aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        <  1:4226486‑M1/100‑74 (MQ=255)
                                                                         aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        >  1:1385812‑M1/1‑27 (MQ=255)
                                                                         aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        >  1:1385241‑M1/1‑27 (MQ=255)
                                                                         aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        <  1:1076777‑M1/100‑74 (MQ=255)
                                                                          aaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaat                        >  1:886335‑M1/1‑26 (MQ=255)
                                                                            acacTCAATTACTTAACATAAATGtataagtaatacttttgttttgggggtatttcaaactgttaaaaagtttttcgctacgctagaaagaaaaaatgaa                     <  2:3744725‑M1/100‑77 (MQ=255)
                                                                             cacTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                    <  1:1949787‑M1/100‑78 (MQ=255)
                                                                              acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                   <  1:1012995‑M1/100‑79 (MQ=255)
                                                                              acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaac                   <  1:1012481‑M1/100‑79 (MQ=255)
                                                                               cTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaa                    >  1:2395865‑M1/1‑21 (MQ=255)
                                                                                tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                 >  1:3222337‑M1/1‑20 (MQ=255)
                                                                                 cAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattttaatctgttaaaaagtttttcgctacgctagctagcaaaaatgaaa                    >  2:4225543‑M1/1‑19 (MQ=255)
                                                                                 cAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                 >  2:1032528‑M1/1‑19 (MQ=255)
                                                                                  aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagg                <  1:957309‑M1/99‑82 (MQ=255)
                                                                                  aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                 <  1:3579000‑M1/98‑81 (MQ=255)
                                                                                  aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttgttcgctacgctagcaagcaaaaatgaaacagg                <  2:3622715‑M1/99‑82 (MQ=255)
                                                                                  aaTTACTTAACATAAATGtataagtcatacttttgttttgggtgtaattcaatctgttaaaaagtttttcgctacaaaaaaaaaaaaaaatgaaacagga               <  2:3280126‑M1/100‑83 (MQ=255)
                                                                                      aCTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata            <  1:3907996‑M1/99‑86 (MQ=255)
                                                                                       cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataat          >  2:11814‑M1/1‑13 (MQ=255)
                                                                                         tAACATAAATGtataagtcatacttttgtttttggtgtatttcaatctgttaaaaagtttttcgttacgttagcaagcaaaaatgaaacaggaataatc         >  2:570342‑M1/1‑11 (MQ=255)
                                                                                         tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc         >  1:4235199‑M1/1‑11 (MQ=255)
                                                                                         tAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc         >  1:684017‑M1/1‑11 (MQ=255)
                                                                                          aaCGTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatc         <  2:4334916‑M1/98‑89 (MQ=255)
                                                                                           aCATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaa      <  2:1121124‑M1/100‑92 (MQ=255)
                                                                                            cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa     >  1:1701021‑M1/1‑8 (MQ=255)
                                                                                            cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa     >  1:4503626‑M1/1‑8 (MQ=255)
                                                                                            cATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa     >  1:2759490‑M1/1‑8 (MQ=255)
                                                                                             aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaat    >  2:2035597‑M1/1‑7 (MQ=255)
                                                                                             aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaat    <  1:2582684‑M1/100‑94 (MQ=255)
                                                                                              tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg   >  1:3174907‑M1/1‑6 (MQ=255)
                                                                                                aaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg  <  2:306830‑M1/99‑96 (MQ=255)
                                                                                                   |                                                                                               
CTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACT  >  NC_000913_3_bme_pgi/1978403‑1978597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: