mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| RA | 10,637 | C→A | G18G (GGC→GGA) | mogA → | molybdenum cofactor biosynthesis protein MogA |
| RA | 194,161 | A→G | M42V (ATG→GTG) | LY180_00835 → | 1‑deoxy‑D‑xylulose 5‑phosphate reductoisomerase |
| RA | 230,529 | T→C | D275G (GAC→GGC) | LY180_01015 ← | LysR family transcripitonal regulator |
| RA | 459,705 | Δ1 bp | coding (137/276 nt) | LY180_02175 ← | transcriptional regulator |
| RA | 793,877 | T→C | C358R (TGT→CGT) | LY180_03720 → | rhsA |
| RA | 793,936 | T→C | S377S (AGT→AGC) | LY180_03720 → | rhsA |
| RA | 793,954 | A→G | E383E (GAA→GAG) | LY180_03720 → | rhsA |
| RA | 793,985 | A→G | N394D (AAC→GAC) | LY180_03720 → | rhsA |
| RA | 814,037 | G→C | T139S (ACC→AGC) | gltA ← | type II citrate synthase |
| MC JC | 1,011,041 | Δ300 bp | intergenic (+21/+62) | LY180_04735 → / ← pflA | hypothetical protein/pyruvate formate lyase‑activating protein |
| MC JC | 1,088,034 | Δ103 bp | intergenic (+278/+242) | helD → / ← LY180_05060 | DNA helicase IV/hypothetical protein |
| RA | 1,168,401 | C→A | S606* (TCG→TAG) | LY180_05445 → | glucosyltransferase |
| RA | 1,213,485 | Δ7 bp | intergenic (+184/‑105) | LY180_05705 → / → LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| RA | 1,324,434 | A→C | K833T (AAA→ACA) | narZ → | nitrate reductase A subunit alpha |
| RA | 1,335,968 | A→G | intergenic (+281/+21) | LY180_06295 → / ← LY180_06300 | thymidine kinase/bifunctional acetaldehyde‑CoA/alcohol dehydrogenase |
| MC JC | 1,335,989 | 2720 bp→18 bp | [LY180_06300]–[LY180_06310] | [LY180_06300], LY180_06305, [LY180_06310] | |
| MC JC | 1,446,672 | Δ2,957 bp | [zntB]–[LY180_06850] | [zntB], LY180_06845, [LY180_06850] | |
| RA | 1,459,895 | C→T | T49T (ACC→ACT) | LY180_06935 → | hypothetical protein |
| RA | 1,464,821 | A→G | intergenic (+486/‑118) | LY180_06955 → / → LY180_06960 | hypothetical protein/regulatory protein |
| RA | 1,505,743 | 2 bp→GT | intergenic (‑91/+19) | LY180_07195 ← / ← LY180_07200 | heat‑inducible protein/hypothetical protein |
| RA | 1,505,880 | T→C | L35L (CTA→CTG) | LY180_07200 ← | hypothetical protein |
| RA | 1,505,925 | A→G | I20I (ATT→ATC) | LY180_07200 ← | hypothetical protein |
| RA | 1,505,928 | T→C | V19V (GTA→GTG) | LY180_07200 ← | hypothetical protein |
| RA | 1,505,955 | T→C | L10L (CTA→CTG) | LY180_07200 ← | hypothetical protein |
| RA | 1,563,485 | A→G | T256A (ACC→GCC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,642 | G→A | R308H (CGC→CAC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,706 | C→T | Y329Y (TAC→TAT) | LY180_07445 → | transposase IS609 |
| RA | 1,563,726 | G→A | C336Y (TGC→TAC) | LY180_07445 → | transposase IS609 |
| RA | 1,563,748 | A→G | E343E (GAA→GAG) | LY180_07445 → | transposase IS609 |
| RA | 1,563,751 | T→C | N344N (AAT→AAC) | LY180_07445 → | transposase IS609 |
| RA | 1,588,241 | A→C | E403D (GAA→GAC) | LY180_07560 → | type IV secretion protein Rhs |
| RA | 1,645,301 | T→G | intergenic (+1095/+165) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| RA | 1,645,397 | C→T | intergenic (+1191/+69) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| RA | 1,645,421 | C→G | intergenic (+1215/+45) | LY180_07765 → / ← LY180_07770 | transposase/sulfatase |
| MC JC | 1,749,406 | Δ777 bp | [LY180_08300]–[LY180_08310] | [LY180_08300], LY180_08305, [LY180_08310] | |
| JC | 1,840,785 | (AAAAACTTTGTGTAATACTTG)1→2 | intergenic (+268/‑43) | LY180_08735 → / → LY180_08740 | pyruvate kinase/murein lipoprotein |
| RA | 1,964,559 | G→A | N226N (AAC→AAT) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,699 | C→T | V180I (GTC→ATC) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,727 | G→T | S170S (TCC→TCA) | LY180_09345 ← | transposase IS609 |
| RA | 1,964,784 | A→C | T151T (ACT→ACG) | LY180_09345 ← | transposase IS609 |
| RA | 2,251,239 | G→A | P28P (CCC→CCT) | LY180_10740 ← | hypothetical protein |
| RA | 2,251,586 | T→C | E104E (GAA→GAG) | LY180_10745 ← | major tail tube protein |
| RA | 2,251,616 | A→G | R94R (CGT→CGC) | LY180_10745 ← | major tail tube protein |
| RA | 2,265,347 | G→A | intergenic (‑100/‑74) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,396 | A→G | intergenic (‑149/‑25) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,399 | G→T | intergenic (‑152/‑22) | LY180_10855 ← / → LY180_10860 | precorrin‑8W decarboxylase/terminase |
| RA | 2,265,885 | C→A | A155A (GCC→GCA) | LY180_10860 → | terminase |
| JC | 2,274,707 | +57 bp | intergenic (‑200/+31) | LY180_10890 ← / ← LY180_10895 | hypothetical protein/hypothetical protein |
| RA | 2,312,761 | T→A | intergenic (‑71/+448) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,767 | 3 bp→GAC | intergenic (‑77/+440) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,771 | G→A | intergenic (‑81/+438) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,312,773 | C→G | intergenic (‑83/+436) | LY180_11070 ← / ← LY180_11075 | hypothetical protein/hypothetical protein |
| RA | 2,483,647 | G→A | P236S (CCG→TCG) | LY180_11800 ← | NADH:ubiquinone oxidoreductase subunit M |
| MC JC | 2,505,263 | Δ394 bp | intergenic (‑620/‑500) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| RA | 2,505,816 | A→G | intergenic (‑1173/‑340) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| RA | 2,506,026 | T→C | intergenic (‑1383/‑130) | LY180_11895 ← / → LY180_11905 | hypothetical protein/phosphate acetyltransferase |
| MC JC | 2,606,939 | Δ122 bp | LY180_12380 | LY180_12380 | |
| RA | 3,010,362 | G→T | E48* (GAA→TAA) | LY180_14330 → | type VI secretion protein ImpK |
| RA | 3,028,824 | G→A | L110L (CTG→CTA) | LY180_14390 → | hypothetical protein |
| RA | 3,028,828 | G→A | A112T (GCC→ACC) | LY180_14390 → | hypothetical protein |
| RA | 3,278,551 | G→A | W246* (TGG→TGA) | LY180_15575 → | aldehyde oxidoreductase |
| MC JC | 3,431,620 | Δ68 bp | coding (288‑355/879 nt) | LY180_16320 → | protease |
| RA | 3,505,943 | C→T | G41D (GGT→GAT) | LY180_16680 ← | malate dehydrogenase |
| RA | 3,545,689 | T→C | noncoding (2811/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,692 | C→T | noncoding (2808/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,695 | G→A | noncoding (2805/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,545,697 | A→G | noncoding (2803/2931 nt) | LY180_16870 ← | 23S ribosomal RNA |
| RA | 3,593,153 | G→A | G142D (GGC→GAC) | LY180_17220 → | transcriptional regulator |
| JC | 3,812,239 | (AGA)2→4 | coding (434/1020 nt) | LY180_18170 ← | peptide ABC transporter permease |
| RA | 3,943,262 | G→A | G302D (GGC→GAC) | LY180_18795 → | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| RA | 4,023,563 | T→C | L4P (CTC→CCC) | rnpA → | ribonuclease P |
| RA | 4,178,979 | T→C | noncoding (1009/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,988 | Δ1 bp | noncoding (1018/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,991 | A→T | noncoding (1021/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,178,993 | +G | noncoding (1023/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,179,007 | C→T | noncoding (1037/1541 nt) | LY180_19945 → | 16S ribosomal RNA |
| RA | 4,305,124 | G→A | G42G (GGG→GGA) | LY180_20645 → | rhsA |
| RA | 4,305,151 | G→C | P51P (CCG→CCC) | LY180_20645 → | rhsA |
| RA | 4,305,201 | C→G | A68G (GCC→GGC) | LY180_20645 → | rhsA |
| MC JC | 4,394,727 | Δ4,605 bp | LY180_21020–LY180_21030 | LY180_21020, adhP, LY180_21030 | |
| RA | 4,469,025 | +A | coding (748/1350 nt) | LY180_21345 → | permase |
| MC JC | 4,815,129 | Δ342 bp | coding (402‑743/1224 nt) | LY180_23005 → | phosphopentomutase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP006584 | 1505961 | 1510560 | 4600 | 15 [14] | [14] 15 | [LY180_07200]–[LY180_07220] | [LY180_07200],LY180_07205,LY180_07210,LY180_07215,[LY180_07220] |
| * | * | ÷ | CP006584 | 1644423–1644851 | 1645276–1644891 | 41–854 | 15 [14] | [13] 15 | LY180_07765/LY180_07770 | transposase/sulfatase |
| * | * | ÷ | CP006584 | 3028904–3029236 | 3032122 | 2887–3219 | 15 [14] | [14] 16 | [LY180_14390]–LY180_14410 | [LY180_14390],LY180_14395,LY180_14400,LY180_14405,LY180_14410 |
| * | * | ÷ | CP006584 | 3345694–3346065 | 3377350–3376399 | 30335–31657 | 15 [14] | [14] 16 | ebgC–LY180_16025 | ebgC,LY180_15890,LY180_15895,LY180_15900,fadH,LY180_15910,LY180_15915,LY180_15920,LY180_15925,LY180_15930,LY180_15935,LY180_15940,LY180_15945,LY180_15950,LY180_15955,LY180_15960,LY180_15965,LY180_15970,LY180_15975,LY180_15980,LY180_15985,LY180_15990,LY180_15995,LY180_16000,LY180_16005,LY180_16010,LY180_16015,LY180_16020,LY180_16025 |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP006584 | 5598 = | NA (NA) | 85 (1.450) | 72/562 | 0.0 | 100% | intergenic (+69/‑191) | LY180_00025/LY180_00030 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 3172592 = | 0 (0.000) | coding (29/273 nt) | LY180_15050 | hypothetical protein | |||||
| * | ? | CP006584 | = 225257 | NA (NA) | 75 (1.230) | 68/584 | 0.1 | NA | noncoding (1014/1541 nt) | LY180_00980 | 16S ribosomal RNA |
| ? | CP006584 | 225269 = | NA (NA) | noncoding (1026/1541 nt) | LY180_00980 | 16S ribosomal RNA | |||||
| * | ? | CP006584 | = 269130 | 68 (1.110) | 76 (1.320) +TCATGTCATTAGTGCGTT |
63/550 | 0.1 | 70.4% | coding (377/414 nt) | LY180_01180 | hypothetical protein |
| ? | CP006584 | 1594499 = | 0 (0.000) | coding (168/909 nt) | LY180_07575 | hypothetical protein | |||||
| * | ? | CP006584 | 294480 = | 40 (0.650) | 19 (0.350) | 19/518 | 2.0 | 34.8% | coding (26/996 nt) | LY180_01335 | hypothetical protein |
| ? | CP006584 | 297564 = | 36 (0.660) | coding (496/1515 nt) | LY180_01350 | tail protein | |||||
| * | ? | CP006584 | = 294513 | 41 (0.670) | 21 (0.390) | 21/518 | 1.7 | 36.8% | coding (59/996 nt) | LY180_01335 | hypothetical protein |
| ? | CP006584 | = 297529 | 36 (0.660) | coding (531/1515 nt) | LY180_01350 | tail protein | |||||
| * | ? | CP006584 | 346068 = | NA (NA) | 73 (1.190) | 59/586 | 0.1 | 96.0% | intergenic (‑51/‑107) | LY180_01675/LY180_01680 | CadC family transcriptional regulator/hypothetical protein |
| ? | CP006584 | = 363812 | 3 (0.050) | intergenic (‑39/‑249) | LY180_01770/LY180_01775 | outer membrane phosphoporin protein E/gamma‑glutamyl kinase | |||||
| * | ? | CP006584 | 363804 = | 3 (0.050) | 98 (1.600) | 70/586 | 0.0 | 97.0% | intergenic (‑31/‑257) | LY180_01770/LY180_01775 | outer membrane phosphoporin protein E/gamma‑glutamyl kinase |
| ? | CP006584 | = 463123 | NA (NA) | coding (772/816 nt) | LY180_02200 | membrane protein | |||||
| * | ? | CP006584 | 840689 = | 28 (0.460) | 25 (0.460) | 24/524 | 1.4 | 50.5% | intergenic (+68/‑82) | LY180_03930/LY180_03935 | tRNA‑Lys/tRNA‑Val |
| ? | CP006584 | = 841381 | 24 (0.440) | intergenic (+125/‑280) | LY180_03950/LY180_03955 | tRNA‑Lys/quinolinate synthetase | |||||
| * | ? | CP006584 | 917080 = | NA (NA) | 42 (0.690) | 37/580 | 0.7 | 97.7% | intergenic (+88/‑191) | LY180_04320/LY180_04325 | heme ABC transporter ATP‑binding protein/hypothetical protein |
| ? | CP006584 | = 2414713 | 1 (0.020) | coding (1017/1644 nt) | LY180_11545 | multidrug ABC transporter ATP‑binding protein | |||||
| * | ? | CP006584 | 1015084 = | 1 (0.020) | 48 (0.780) | 47/586 | 0.4 | 98.0% | coding (445/858 nt) | LY180_04750 | formate transporter |
| ? | CP006584 | = 1154738 | NA (NA) | coding (35/636 nt) | LY180_05370 | hydrolase | |||||
| * | ? | CP006584 | = 1015093 | 3 (0.050) | 52 (0.850) | 46/584 | 0.4 | 94.6% | coding (436/858 nt) | LY180_04750 | formate transporter |
| ? | CP006584 | 1153411 = | NA (NA) | intergenic (‑823/+12) | pgaA/LY180_05365 | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein/hypothetical protein | |||||
| * | ? | CP006584 | 1153410 = | NA (NA) | 73 (1.190) | 61/586 | 0.1 | 91.2% | intergenic (‑822/+13) | pgaA/LY180_05365 | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine export protein/hypothetical protein |
| ? | CP006584 | 1213575 = | 7 (0.110) | intergenic (+274/‑21) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC | |||||
| * | ? | CP006584 | = 1213484 | 6 (0.100) | 47 (1.110) +90 bp |
47/406 | 0.1 | 91.9% | intergenic (+183/‑112) | LY180_05705/LY180_05710 | DNAse/PTS glucose transporter subunit IIBC |
| ? | CP006584 | 2565082 = | NA (NA) | intergenic (+68/‑109) | LY180_12185/LY180_12190 | D‑serine dehydratase/hypothetical protein | |||||
| * | ? | CP006584 | = 1432318 | 10 (0.160) | 53 (0.870) | 49/584 | 0.3 | 84.8% | coding (195/1614 nt) | LY180_06775 | peptide ABC transporter substrate‑binding protein |
| ? | CP006584 | 1435520 = | 9 (0.150) | coding (801/951 nt) | LY180_06790 | universal stress protein E | |||||
| * | ? | CP006584 | 1643563 = | 50 (0.820) | 86 (1.450) | 68/566 | 0.0 | 78.1% | intergenic (‑223/‑80) | LY180_07760/LY180_07765 | sulfatase/transposase |
| ? | CP006584 | = 4565632 | 0 (0.000) | intergenic (‑372/+82) | LY180_21775/LY180_21780 | hypothetical protein/lysine 2,3‑aminomutase | |||||
| * | ? | CP006584 | 1749406 = | NA (NA) | 75 (1.220) | 74/586 | 0.0 | 92.6% | coding (13/864 nt) | LY180_08300 | transcriptional regulator |
| ? | CP006584 | = 3920817 | 6 (0.100) | coding (415/984 nt) | LY180_18670 | beta1,3‑glucosyltransferase | |||||
| * | ? | CP006584 | = 1750173 | NA (NA) | 70 (1.140) | 63/586 | 0.1 | 100% | coding (380/384 nt) | LY180_08310 | gdgsA |
| ? | CP006584 | 3920810 = | 0 (0.000) | coding (422/984 nt) | LY180_18670 | beta1,3‑glucosyltransferase | |||||
| * | ? | CP006584 | 2030792 = | NA (NA) | 46 (0.760) | 43/578 | 0.5 | 100% | intergenic (+74/+105) | znuB/LY180_09680 | zinc transporter/hypothetical protein |
| ? | CP006584 | 2414712 = | 0 (0.000) | coding (1018/1644 nt) | LY180_11545 | multidrug ABC transporter ATP‑binding protein | |||||
| * | ? | CP006584 | = 2253835 | 37 (0.600) | 14 (0.240) | 14/556 | 3.0 | 26.9% | coding (52/414 nt) | LY180_10760 | hypothetical protein |
| ? | CP006584 | = 2255646 | 41 (0.710) | coding (842/1284 nt) | LY180_10775 | tail protein | |||||
| * | ? | CP006584 | 2385043 = | 2 (0.030) | 52 (0.850) | 46/584 | 0.4 | 96.3% | coding (718/1026 nt) | LY180_11390 | microcin C ABC transporter permease |
| ? | CP006584 | 2565085 = | NA (NA) | intergenic (+71/‑106) | LY180_12185/LY180_12190 | D‑serine dehydratase/hypothetical protein | |||||
| * | ? | CP006584 | = 2385052 | 3 (0.050) | 36 (0.590) | 34/586 | 0.9 | 92.3% | coding (727/1026 nt) | LY180_11390 | microcin C ABC transporter permease |
| ? | CP006584 | 2565084 = | NA (NA) | intergenic (+70/‑107) | LY180_12185/LY180_12190 | D‑serine dehydratase/hypothetical protein | |||||
| * | ? | CP006584 | = 2891935 | NA (NA) | 74 (1.210) | 68/584 | 0.1 | 98.7% | intergenic (+12/+249) | LY180_13750/LY180_13755 | hypothetical protein/transcriptional regulator |
| ? | CP006584 | = 3268631 | 1 (0.020) | coding (88/1119 nt) | LY180_15515 | hydrogenase 2 small subunit | |||||
| * | ? | CP006584 | 2896407 = | NA (NA) | 63 (1.040) | 58/578 | 0.1 | 100% | intergenic (+63/+105) | LY180_13765/LY180_13770 | 6‑phospho‑beta‑glucosidase/transposase |
| ? | CP006584 | 3262157 = | 0 (0.000) | intergenic (+107/+16) | LY180_15475/LY180_15480 | GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG | |||||
| * | ? | CP006584 | = 3172593 | 0 (0.000) | 70 (1.160) | 65/578 | 0.1 | 100% | coding (28/273 nt) | LY180_15050 | hypothetical protein |
| ? | CP006584 | 4311141 = | NA (NA) | intergenic (‑130/+105) | LY180_20655/LY180_20660 | hypothetical protein/hypothetical protein | |||||
| * | ? | CP006584 | = 3262158 | 0 (0.000) | 69 (1.170) | 65/562 | 0.1 | 100% | intergenic (+108/+15) | LY180_15475/LY180_15480 | GSH‑dependent disulfide bond oxidoreductase/hydrogenase 2 accessory protein HypG |
| ? | CP006584 | = 4312417 | NA (NA) | intergenic (‑191/+57) | LY180_20660/LY180_20665 | hypothetical protein/transcriptional regulator | |||||
| * | ? | CP006584 | 3268622 = | 1 (0.020) | 78 (1.270) | 68/586 | 0.1 | 98.7% | coding (97/1119 nt) | LY180_15515 | hydrogenase 2 small subunit |
| ? | CP006584 | 3344744 = | NA (NA) | coding (163/330 nt) | LY180_15880 | hypothetical protein | |||||
| * | ? | CP006584 | 3305035 = | 3 (0.050) | 46 (0.750) | 40/584 | 0.6 | 93.9% | intergenic (‑341/‑33) | ribB/LY180_15715 | 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/hypothetical protein |
| ? | CP006584 | = 3672182 | NA (NA) | coding (475/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | = 3305045 | 4 (0.070) | 90 (1.470) | 76/584 | 0.0 | 95.8% | intergenic (‑351/‑23) | ribB/LY180_15715 | 3,4‑dihydroxy‑2‑butanone 4‑phosphate synthase/hypothetical protein |
| ? | CP006584 | 3344745 = | NA (NA) | coding (164/330 nt) | LY180_15880 | hypothetical protein | |||||
| * | ? | CP006584 | 3379202 = | 1 (0.020) | 76 (1.240) | 66/586 | 0.1 | 98.7% | intergenic (+70/‑172) | LY180_16040/LY180_16045 | membrane protein/membrane protein |
| ? | CP006584 | = 3672183 | NA (NA) | coding (474/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | = 3379210 | 4 (0.070) | 53 (0.860) | 48/586 | 0.3 | 93.0% | intergenic (+78/‑164) | LY180_16040/LY180_16045 | membrane protein/membrane protein |
| ? | CP006584 | = 3672183 | NA (NA) | coding (474/477 nt) | LY180_17575 | membrane protein | |||||
| * | ? | CP006584 | 3513966 = | 18 (0.290) | 16 (0.570) +158 bp |
8/270 | 2.0 | 65.2% | intergenic (‑142/+197) | tldD/LY180_16725 | protease TldD/membrane protein |
| ? | CP006584 | = 3513990 | 19 (0.310) | intergenic (‑166/+173) | tldD/LY180_16725 | protease TldD/membrane protein | |||||
| * | ? | CP006584 | 4186759 = | NA (NA) | 79 (1.290) | 71/584 | 0.0 | 94.1% | coding (292/294 nt) | LY180_19995 | hypothetical protein |
| ? | CP006584 | 4334567 = | 5 (0.080) | coding (30/1734 nt) | LY180_20755 | membrane protein | |||||
| * | ? | CP006584 | = 4188086 | NA (NA) | 85 (1.390) | 73/586 | 0.0 | 97.7% | coding (17/1167 nt) | LY180_20005 | hypothetical protein |
| ? | CP006584 | = 4334576 | 2 (0.030) | coding (21/1734 nt) | LY180_20755 | membrane protein | |||||
| * | ? | CP006584 | 4496128 = | NA (NA) | 58 (1.030) | 56/538 | 0.1 | 100% | intergenic (‑2037/‑83) | LY180_21445/LY180_21450 | hypothetical protein/hypothetical protein |
| ? | CP006584 | 4565632 = | 0 (0.000) | intergenic (‑372/+82) | LY180_21775/LY180_21780 | hypothetical protein/lysine 2,3‑aminomutase | |||||
| * | ? | CP006584 | 4496731 = | NA (NA) | 289 (4.720) | 214/586 | 0.0 | NA | coding (521/1209 nt) | LY180_21450 | hypothetical protein |
| ? | CP006584 | = 4497432 | NA (NA) | intergenic (+13/+464) | LY180_21450/LY180_21455 | hypothetical protein/D‑allose kinase | |||||
| * | ? | CP006584 | 4739807 = | 60 (0.980) | 20 (0.340) | 20/568 | 2.1 | 23.6% | intergenic (+48/‑432) | LY180_22625/fimA | tyrosine recombinase/type‑1 fimbrial protein subunit A |
| ? | CP006584 | 4740121 = | 71 (1.200) | intergenic (+362/‑118) | LY180_22625/fimA | tyrosine recombinase/type‑1 fimbrial protein subunit A | |||||