| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 401 (0.140) | 1014 (0.290) +ATATAT |
120/184 | 27.8 | 65.3% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 618 (0.170) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 1386 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATGTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCCTATTACCTATAGAGTTAATG‑‑A > 2:4977213/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAATCCTCCAAATTACCTATAGAGTTAATG‑‑AT > 1:4176431/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATAT > 2:7611803/1‑128 TATTTTTTTATTTGTAAGTTTAATTTTTAATAAATATTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATA < 1:5505181/128‑1 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTATTG‑‑ATATATAT > 1:5036063/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑ATATATAT < 1:7117920/128‑1 TTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGATATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA < 1:2267664/128‑1 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCTTATTACCTATAGAGTTAATG‑‑ATATATATATATA > 2:1361645/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATA > 2:1025038/1‑128 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGAATTTTTAAAATAAATAATTTATGAAATGAAGAAAATCAAAAACATCCATATTACCTAAAGAGATAATG‑‑ATATATATATATATAa > 1:2431497/1‑127 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCACCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATAT < 2:6468371/128‑1 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGAAAAGCAATAAAATCAATATTACATATAGAGATAATG‑‑ATATATATATATATATAT > 2:3485865/1‑128 TTGTAAGATTCATATTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATAT < 2:399506/128‑1 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT > 2:161520/1‑128 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑ATATATATATATATATATAT > 1:6558558/1‑128 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 2:235010/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA > 1:3494882/1‑128 TAAGTTTAATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 1:1532976/128‑1 aatTTTCATTTTTAATAAATATTAGAAAAAAAAATTGTATTTTTAAAATAAATATTTTATGAAAAGAAGCAAATCAAAAAACTCAATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT < 2:85675/125‑1 AAGTTTCATTTTTAATAAATATTAGATATAAAAAATGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT < 2:3716536/128‑1 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTAATG‑‑ATATATATATAAATAAATtaat > 1:1944179/1‑124 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT > 2:4183365/1‑128 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAT > 2:7893995/1‑128 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTAAATATAGATTTAATG‑‑ATATATATATATATATATATATATA > 1:5215423/1‑128 TTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT > 2:4645969/1‑128 TTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT > 1:7386436/1‑128 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATA > 2:5979107/1‑128 TTTTTAATAAATATTAGAAATAAAAATTTTATATTTAAAATAAATATTTTAGTAAATCAATAAAATCAAAAACCTCCATAATAACTATAGAGATAATT‑‑ATATATATATATATATATATATATATATAT < 2:4477240/128‑1 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATgc > 2:364112/1‑126 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGAAAAAACCTCCATATTACATATATAGTTAATT‑‑ATATAAATATATATATATATATATATATATATtc > 2:5375848/1‑126 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGATTTAATG‑‑ATATATATATATATATATATATATATATATATtc > 1:724391/1‑126 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATtcaa > 2:2820956/1‑124 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATgc < 2:6187692/128‑3 AATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATtcaag > 2:7302971/1‑123 AATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATtca > 2:3340946/1‑125 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGAAAG > 2:6361620/1‑128 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCAATATTAACTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATtaaagat > 2:1478423/1‑121 ATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATactaaa > 1:3296607/1‑122 TATTATAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATTAATCAAATATAAAAACTCCATATTAAATATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCG < 2:6999752/128‑1 ATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATtctagctatc > 1:7571256/1‑118 TTATAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTTATT‑‑ATATATATATATATATATATATATATATATATATGCAAGCGAT < 1:6069886/128‑1 TAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATgaaagctatcat > 2:5721474/1‑116 TAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAG > 1:2989302/1‑128 AAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATAAAAGCTATaaaa > 2:7735170/1‑124 AAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA > 2:1135279/1‑102 AAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 1:1135279/102‑1 AATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCTCAATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATA < 2:2147224/128‑1 AATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCA > 2:3853320/1‑128 ATAAAAATTTTATTTTTAAAATAAATATTTTATTAAATGAATCAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAA < 2:1252844/128‑1 TAAAAATTGTATTTTTAAAATAAATATTTTATTATATTAATCAAAGAAAAAAAATCCATATTAACTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAA < 1:2553681/128‑1 atAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAA < 2:6559964/126‑1 AAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATAATAGCGATCAaattaa > 2:7102420/1‑122 AAAAATTGTATTTTTAAAATAAATATTTTAGGAAATCAAGCAAAGAAAAAAACTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAA < 1:5919885/128‑1 AAATTTTATTTTTAAAATAAATATTTTATTAAATCAATCAAAACAAAAACCTCAATATTAACTATAGAGTTAATT‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAA < 1:6684666/128‑1 GTATATTTAAAATAAATATTTTAGGAAATGACTCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAA < 1:4842215/128‑1 TATTTTTAAAATAAATATTTTATTAAATGAAGAAAAGCAAAAACCTCCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAA < 1:6811520/128‑1 TATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATATATATATATGAAAGAGATCAACATAAAATGtt > 1:4727736/1‑126 TATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATttttaaa > 2:2597485/1‑121 ATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGAAAGCGATCATCATAAAATGTTGAAAT > 2:4335863/1‑128 TTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATT > 2:2927692/1‑128 TTAAAATAAATATTTTAGTAAATTAATCAAATAAAAAAAATCCATATTACCTATAGAGATAATGATATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAT < 2:510223/128‑1 AAATATTTTAGTATATTATTCAAATCAAAAACCTCAATATTAAATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAG < 1:7852144/128‑1 TTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGAGAAATTTAGATATGAGTTt > 2:609584/1‑127 TTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATACAAGCGATCAGAATAAATTGGTGATATTTATATCTGAGTTt > 1:2024810/1‑127 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATTCAATCTATCAGAATAAAATAGTCAAATTTAGATCAGAGTTGa > 2:6675905/1‑127 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGAAAGCTATCACCATAAAATGGTGAAATTTAGATCTTAGTTtc > 1:3795388/1‑126 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTC > 1:39141/1‑128 TTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGAAAGATATCAGAATAAAATGTAGAAATTTATATCTGAGTTTGTC > 1:5643981/1‑128 TAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGAAAGCGATAAGAATAAAATTGTTAAATATATATATGAGTTGGTC > 2:3120944/1‑128 ATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTT > 2:1799715/1‑128 CAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCAAAATATGGATAAATTTATATCTGAGTTGGTCTTATATTTtgag > 1:1343622/1‑124 AAAGAAAAAACCTCCATATTAACTATAGAGTTATTG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGAGCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTT < 2:2008772/128‑1 AGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAACAAAAAATGGTGAAATTTAGATCTGAGATGCTCTTAAAataatagtat > 1:7705931/1‑118 gaAAAAACCTCTATAATAGCTATAGAGTTAATG‑‑ATATATATATATAT‑T‑TATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTA < 2:5237708/126‑1 AAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCTAGCGATCAGAATAATATTGTGAAATTTAGATCTGAGTTTGTATTAAATTTGTTGTTTTTATTTA > 1:1014028/1‑128 aaCTCAATATTACCTATAGAGTTAAT‑‑‑‑‑‑TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGT < 1:2830599/126‑1 ACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATA > 2:746432/1‑128 actaCATATTACATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAG < 2:5823881/124‑1 CATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTA > 2:2463121/1‑128 TATTATATATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATA < 2:2727759/128‑1 TTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTTAAATTTATATCTGAGTTTGTATTAAATTTGTAGTTTTTATTTATAGTTTATAAA > 1:6990896/1‑128 caTATATAGTTAAT‑‑‑‑TATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTT < 1:874513/126‑1 TAGAGTTATTT‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAA < 1:6316507/128‑1 AGAGTTAATG‑‑‑‑ATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATAA > 1:2666542/1‑128 tatagtgatATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAACTGGTGAAATTTAGATCTGAGTGGGGCTTAAATTTGTAGTTTTTATTTATAGTTTATACAGTTAATA < 1:6140493/119‑1 GTTAATG‑‑ATATATATATATATATATATATATATATATATAAGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGTTAATAAT > 1:4360210/1‑128 aTAATC‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATT < 1:5385888/127‑1 TAATG‑‑ATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTT < 2:5646940/128‑1 gttaatgATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTTAAATTTATATCTGAGTTTGTATTAAATTTTTAGTTTTTATTTATATTTTATAAATTTAATAATTT > 1:6420797/8‑128 gttaatgATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGATATTTATATCTGAGTTGGTCTTAAATTTGTATTTTTTATTTATAGTTTATAAAGTTAATAATTT > 1:1824500/8‑128 gttaatgATATATATATATATATATATATATATATATATGAAAGCGATCAGAATAAAATGGTGAAATTTATATCTGATTTTGTCTTAAATTTTTATTTTTTATTTATATTTTATAAATTTAATAATTT > 1:5795876/8‑128 attatTATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTA < 2:4767091/123‑1 taaATATTTATATATATATATTTATATTTATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAG < 2:1944179/125‑1 attATATATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAG < 1:4583570/125‑1 tttTATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATT < 1:4063458/125‑1 TATATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTT < 1:1637553/128‑1 ATATATATATATATATATATATATATATATGCTAGCGATCAGAATAAAATTGTGAAATTTATATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATATTTTATATAGTTAATAATTTAGATTTTTA > 2:6832038/1‑128 TATATATATATATATATATATATATATATGCAAGCGCTCAGCATAAAATGGTGAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATATTTTATAAATTTAATAATTTAGATTTTTAt > 1:3575917/1‑127 TATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA < 1:3130172/128‑1 TATATATATATATATATATATATATATAAGCAAGCGATCAGAATAAAATGGTGATATTTAGATCTGAGTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATATAGTTAAATATTTAGATTTTTAA > 2:5525082/1‑128 |||||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |