BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	= 437880	439 (0.380)	313 (0.220) +ATAT	73/188	12.1	35.0%	intergenic (‑184/+238)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
*	?	CP016816	437881 =	637 (0.430)	313 (0.220) +ATAT	73/188	12.1	35.0%	intergenic (‑185/+237)	JCVSYN2_01985/JCVSYN2_01990	glycosyl transferase/ABC transporter permease
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 953 total aligned reads displayed.

TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007

tGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑g                                                                                                                                       >  2:784574/1‑128 (MQ=255)

 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATTAATATTTTAGGAAATGAAGCTAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑a                                                                                                                                    >  2:2100352/1‑128 (MQ=255)

 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGATATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑a                                                                                                                                    >  2:2923752/1‑128 (MQ=255)

 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑a                                                                                                                                    >  2:1906152/1‑128 (MQ=255)

 gAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑a                                                                                                                                    >  2:2855354/1‑128 (MQ=255)

  aaaCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAATCCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at                                                                                                                                   >  2:1637748/1‑128 (MQ=255)

    aCTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACATATAGAGTTAAT‑‑G‑‑at‑‑‑‑at                                                                                                                             >  2:2825180/1‑128 (MQ=255)

     cTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑ata                                                                                                                            >  1:1026073/1‑128 (MQ=255)

      ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atat                                                                                                                           >  2:2694757/1‑128 (MQ=255)

      ttATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atat                                                                                                                           >  1:766597/1‑128 (MQ=255)

         tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatata                                                                                                                        >  2:1002895/1‑128 (MQ=255)

         tttttGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCAATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atataaa                                                                                                                        >  2:1333373/1‑126 (MQ=255)

             tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatata                                                                                                                    >  2:2608812/1‑128 (MQ=255)

             tGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatata                                                                                                                    >  2:728533/1‑128 (MQ=255)

               tAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatata                                                                                                                  <  1:2316219/128‑1 (MQ=255)

                  ttgttttttttATTTTTTATAAATATTATATATAAATATTGTTTTTTTATAATATATATTTTATGTAATTAATCAAATCAAAAAAATCCATATAATATATATAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatat                                                                                                               <  1:1632883/121‑1 (MQ=255)

                   tGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGAATTTTTAAAATAAATATTTTAGAAAATAAAGCAAAGCAAAAACATCCATATTACATATTTAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatataaata                                                                                                              >  2:1574424/1‑128 (MQ=255)

                    gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatat                                                                                                             >  1:2735817/1‑128 (MQ=255)

                    gTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatat                                                                                                             >  1:854595/1‑128 (MQ=255)

                    gTAAGTTTCA‑TTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatata                                                                                                            >  1:1914688/1‑128 (MQ=255)

                      aaGTTTCATTTTTAATAAATATTAGAAATAAATATTGTATTTTTAAAATAAATATTTTATTAAATGAAGCAAACCAAAAAACTACATATTACCTATAGAGTTAAA‑‑G‑‑at‑‑‑‑atatatatatatatatatat                                                                                                           <  2:862162/128‑1 (MQ=255)

                      aaGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatat                                                                                                           >  2:2466250/1‑128 (MQ=255)

                        gTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatat                                                                                                         >  1:2431605/1‑128 (MQ=255)

                         tttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatata                                                                                                        >  1:3088369/1‑128 (MQ=255)

                          ttCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatatat                                                                                                       >  2:1504475/1‑128 (MQ=255)

                           ttatttttttaaaataTTTTATATATAAATTTTTTTTTTTAAAAAAATATTTTTTTATATTATTAAAATATAAAAAATCTATATTAAATATATAGTTAAT‑‑t‑‑at‑‑‑‑atatatatatatatatatatatata                                                                                                      <  1:1001122/117‑1 (MQ=255)

                               ttttAATAAATATTAGAAATAAAAATTGTA‑TTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACGTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑AAATATATATATATATATATATAAATTCaa                                                                                                 >  2:619040/1‑128 (MQ=255)

                                tttAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatatatataatc                                                                                                 >  2:2380245/1‑124 (MQ=255)

                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatatatatatgcaa                                                                                               >  2:901510/1‑122 (MQ=255)

                                  taataaATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atataaatatatatatatatatataagaaata                                                                                               >  1:6034/1‑121 (MQ=255)

                                   aataaattTTATATATAAAATTTTTTTTTTTAAAATAAATATTTTATTAAATTAAGCAAATCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCg                                                                                              <  1:2481934/128‑1 (MQ=255)

                                   aataaataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatatattcaagcgat                                                                                              >  1:2159071/1‑119 (MQ=255)

                                      aaataTTATATATAAAAATTTTATTTTTATAATAAATATTTTATTAAATTAATAAAATAAAAAAAATCAATATTAACTATAGAGATAATTAT‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGa                                                                                             <  2:1386577/128‑1 (MQ=255)

                                       aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at                                                                                                                                   >  1:2111416/1‑91 (MQ=255)

                                       aataTTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCACGCGATCAGc                                                                                        >  1:525163/1‑128 (MQ=255)

                                           ttAGATATAAAAATTCTATTTATAAAATAAATATATTATTAAATGAATAAAATCAAAAAACTCAATATTAACTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  2:1236245/128‑1 (MQ=255)

                                           ttAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATACAAGAGATCAGAAt                                                                                      >  2:2405867/1‑128 (MQ=255)

                                             ataaaTAAAAATTGTATTTTTAAAATAAATATTTTATTAAATGAATCAAATAAAAAACATCCTTATTAACTATAGAGTTAAT‑‑T‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  1:1266997/126‑1 (MQ=255)

                                             aGAAATAATATTAGTATTTTTAAAATAAATATTTTAGGAAATGAAGCACAGCAAACACCACCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  1:3192822/128‑1 (MQ=255)

                                             aGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATaa                                                                                    <  1:1473933/128‑1 (MQ=255)

                                              gAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCATCATAAAATgg                                                                               >  1:2853305/1‑128 (MQ=255)

                                               aaaTATAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGAAAAAACATCAATATTAACTATAGAGTTAAT‑‑‑‑‑‑T‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATg                                                                                <  1:1218016/128‑1 (MQ=255)

                                                aaTAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGAAAGCTCTCAGCATAAAAt                                                                                 >  2:1694221/1‑128 (MQ=255)

                                                  tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAAt                                                                                 >  1:1856640/1‑128 (MQ=255)

                                                  tAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATTAAATAGATCAGCAAAAAATgg                                                                               >  1:376156/1‑128 (MQ=255)

                                                   aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATCAAAGCTATCAGCATAAAATCGt                                                                              >  1:94794/1‑128 (MQ=255)

                                                   aaaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGaaa                                                                          >  1:41683/1‑128 (MQ=255)

                                                    aaatTTGTATTTTTAAAATAAATATTTTAGGATATGAATAAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAAt                                                                         <  1:2366066/128‑1 (MQ=255)

                                                    aaaaTTGTATTTTTAAAATATATATTTTAGTAAATTAATATAATAAAAAAAATCTATATAAACTATATAGTTAAT‑‑T‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTg                                                                             <  1:3152525/128‑1 (MQ=255)

                                                    aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATTCAAGCTATCAGCATAAAATGGta                                                                             >  1:1748487/1‑127 (MQ=255)

                                                    aaaaTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGAAAGAGATCAGCATAAAATGGTg                                                                             >  1:2585052/1‑128 (MQ=255)

                                                       aTTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAACACCTCCATATTACCTATAGAGTTAAT‑‑C‑‑AT‑‑‑‑ATATATATATATAAATATATATATATTCGAGCGATGAGCTAAAGATAGTGata                                                                          >  1:1400064/1‑126 (MQ=255)

                                                         tGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAATCGAACATAATAAAATAGTGaaa                                                                          >  1:1802613/1‑128 (MQ=255)

                                                         tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCACGCGATCAGCATAAAATGGTTATATTTa                                                                      >  2:666118/1‑128 (MQ=255)

                                                         tGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATATGCAAGCGATCAGCATAATATGGTGAAATTTAGa                                                                    >  2:254968/1‑128 (MQ=255)

                                                          gTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATTCAAGAGATCAGCATAAAATTGTTAAAt                                                                         >  1:1981198/1‑128 (MQ=255)

                                                            aTTTTTAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTACATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                     <  2:2734635/128‑1 (MQ=255)

                                                            aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAg                                                                     >  1:1112749/1‑128 (MQ=255)

                                                            aTTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGAAAGCGATCAGAATAAAAATGTGAAatatatat                                                                   >  1:2240615/1‑128 (MQ=255)

                                                             tttttAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAG‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGAGATCAGCATAAAATGGTGAAATTTAGa                                                                    >  1:3009519/1‑128 (MQ=255)

                                                                ttAAAATAAATATTTTATGAAATGAATCAAATCAAAAACCTCCATATTACCTATAGAGATAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCt                                                                 <  2:110228/128‑1 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAATACCTCCATATTACCTATATAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATAAATATATATATATTCAAGCTATAAGAATAAAATGTAGATATTTATATCTg                                                                >  2:145320/1‑128 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAACACCTCCATAATACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCTAGCGATAATCATAAAATTGTGAAATTTAGATCTGAg                                                              >  2:1846613/1‑128 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCTATCAGCATAAAAAGGAGAAATTTATATCTg                                                                >  2:2027163/1‑128 (MQ=255)

                                                                 tAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTg                                                                >  2:314541/1‑128 (MQ=255)

                                                                       aaataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTgg                                                          <  2:2172695/128‑1 (MQ=255)

                                                                        aataTTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCTAGCGATCAGAATAAAATGGTGATATATATATCTGTGTTg                                                           >  2:3001908/1‑128 (MQ=255)

                                                                          tataTTAGGAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                       <  2:573919/128‑1 (MQ=255)

                                                                          tatTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATATAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                       <  1:2805129/128‑1 (MQ=255)

                                                                            ttttAGTAAATGAAGCAAAGCAAAAACCACAATATAACATATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCt                                                       <  1:1364159/128‑1 (MQ=255)

                                                                             tttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATTGTGAAATTTAGATCTGAGTTGGTCTTaa                                                    >  2:1751730/1‑128 (MQ=255)

                                                                              ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATTCTCGATCTCAAAATAAAAAGGTGAAATTTATATTTGAGTTTTTTTTaaa                                                   >  1:1701288/1‑128 (MQ=255)

                                                                              ttAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTaaa                                                   >  2:1286766/1‑128 (MQ=255)

                                                                                 ggAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                >  2:2316802/1‑128 (MQ=255)

                                                                                   aaaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAAttt                                                >  2:3102326/1‑128 (MQ=255)

                                                                                   aaaTGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGt                                              >  2:2777542/1‑128 (MQ=255)

                                                                                       gAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGTTGAAATTTAGATCTGAGTTTGTCTTATATTTGTAttt                                          >  1:668946/1‑128 (MQ=255)

                                                                                            aaagcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑at‑‑‑‑atatatatatatatatatatatata                                                                                                      >  2:1158958/1‑63 (MQ=255)

                                                                                            aaagcaaaAACCACAATATTAGCTATAGAGTTAAT‑‑G‑‑ATATAAATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGttt                                         <  1:723828/128‑1 (MQ=255)

                                                                                            aaagaaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTtttat                                     <  1:2755572/128‑1 (MQ=255)

                                                                                              atcaaaAACCTCCATATTAACTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGtt                             <  1:2701211/126‑1 (MQ=255)

                                                                                              agcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATAAAAGCGATCAGCATAAAATTGTGAAATTTAGATAAGAGTTTATCTTAAATTTTTAGTTtatattt                                   >  2:3045081/1‑128 (MQ=255)

                                                                                               gcaaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGAGAAATATATATCTGAGTTGGTCTTAAATTTGTAGTTtttattta                                  >  2:181495/1‑128 (MQ=255)

                                                                                                caaaAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATATCCAACCGATCAGCAAAAAATGGAGAAATGTAGATCTCAGATGGTCTAAAAGTTGTAGTTTATATTTATAGtata                           >  1:2528522/1‑128 (MQ=255)

                                                                                                 taaaaagacaatatTACCTATAGAGAAAAT‑‑G‑‑AA‑‑‑‑ATATATATAAATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAACTTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTtata                                <  1:2031771/118‑1 (MQ=255)

                                                                                                   aaaCATCAATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGt                              <  2:266253/128‑1 (MQ=255)

                                                                                                      ccTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGAATAAAATGGTGAAATTTAGATCTGAGTTGTTCTTAAATTTGTAGTTTTTATTTATAGTTta                           >  2:3200995/1‑128 (MQ=255)

                                                                                                        tcaatatAAACTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATAAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                         <  2:2229268/125‑1 (MQ=255)

                                                                                                        tCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTtata                         >  1:1164300/1‑128 (MQ=255)

                                                                                                         ccATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATAAGCTAGCGATCAGCATAATATGGTGATATTTATATCTGAGTTTGTCTTATATTTGTAGTTTTTATTTATAGTTTATaa                        >  1:1562108/1‑128 (MQ=255)

                                                                                                          cATATTACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGATAGATATCAGCATAAAATGGTGAAATTTAGATCTTAGTTGGTATTAAATTTATAGTTTTTATTTATAGTTtatatata                     >  1:897055/1‑124 (MQ=255)

                                                                                                             atTAACTATAGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAg                      <  1:1311356/128‑1 (MQ=255)

                                                                                                              ttACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCACGCGATCAGCATAAAATGGTAAAATTTAGATCTGAGTTGGTCTTAAATTTCTAGTTTTTATTTATAGTTTATAAAGTta                   >  2:510086/1‑128 (MQ=255)

                                                                                                              ttACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCTATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTTTAGTTTTTATTTATAGTTTATATAGTta                   >  2:377360/1‑128 (MQ=255)

                                                                                                              ttACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTATATCTGAGTTTGTCTTAAATTTTTAGTTTTTATTTATAGTTTATAAAGTta                   >  2:1044722/1‑128 (MQ=255)

                                                                                                               tACCTATAGAGTTAAT‑‑G‑‑‑‑‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                <  2:226525/128‑1 (MQ=255)

                                                                                                                aacTATAGAGTTATT‑‑TATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTta                   <  1:556120/126‑1 (MQ=255)

                                                                                                                 ccTATAGAGATAAT‑‑T‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                <  2:446672/128‑1 (MQ=255)

                                                                                                                   tataGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTtaata                <  2:1951338/128‑1 (MQ=255)

                                                                                                                     taGAGTTAAT‑‑GATAT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTTAAATTTAGATCTGAGTTGGTCTTAAATTTTTTGTTTATATTTATAGTTTATAAATTTaataat              >  1:2913743/1‑128 (MQ=255)

TGAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAAT‑‑G‑‑AT‑‑‑‑ATATATATATATATATATATATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA  >  CP016816/437753‑438007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.