New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =2682 (0.550)547 (0.140) 164/208 12.1 20.6% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 2008 (0.500)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3048 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311021‑311276
                                                                                                                               |                                                                                                                                          
tGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATAcattcat                                                                                                                                            >  2:3569334/1‑128 (MQ=255)
  tACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑ta                                                                                                                                        >  1:5860441/1‑128 (MQ=255)
  tACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTAATTTTACACACCCCTTATTAAAAAATAAAATACTTATAACATACTAATCAAAACATAAAAAACAAAcattcataa                                                                                                                                          >  2:1417043/1‑126 (MQ=255)
  tACCAGTTGTAATAACTAATCCAAAAGAACATAAAATTGTAATTAACTTTTTCATTTTACACACCCCATATTAAAAAATAAACTACTAGTTACATACGATTCAAAACATATAAAACATACATTCAT‑‑ta                                                                                                                                        >  2:1253000/1‑128 (MQ=255)
         tGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAAAATATATAATATACATTCAT‑‑tatatatat                                                                                                                                 >  1:7799410/1‑128 (MQ=255)
          gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCTTTTTACACACCACTTATTAAAAAATAAAATACTAGTTACATACGAATCAAAACATAAATAACATACAATCAT‑‑aatatatata                                                                                                                                >  1:5489730/1‑128 (MQ=255)
           taataaCTAATCAAAATTAACATAAAATTGTAATTAACATTTTCATTTTACACTCACATTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatat                                                                                                                               <  2:6634647/128‑1 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatat                                                                                                                             >  2:9214556/1‑128 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatat                                                                                                                             >  2:8308497/1‑128 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCAT‑‑tatatatatatat                                                                                                                             >  1:2622903/1‑128 (MQ=255)
                aCTAATCCATATTAACTTAATATTGTAATTAACTTTTTCATTTTACACACCCATTATAAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                          <  2:4491459/128‑1 (MQ=255)
                aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGAGTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                          >  1:6282410/1‑128 (MQ=255)
                aCTAATACAAATTAAATTAAAATTTTAATTAACTTTTTCATTTTAAACAACACTTATTAAAAAATAAAAAACTTTTTAAATAAGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                          <  2:9582420/128‑1 (MQ=255)
                aCTAATAAAAATTAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATAATTTTTACATACTATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatata                                                                                                                          <  2:3177424/128‑1 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatata                                                                                                                        >  2:4330139/1‑128 (MQ=255)
                   aaTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatat                                                                                                                       >  1:1000916/1‑128 (MQ=255)
                     taataattttcTTATAATTTTAATTAAATTTTTAATTTTAAACACCCAATATTAAAAAATAAAATACTTTTTACATAATATTAAAAAGATATATATCATTCATTCAT‑‑tatatatatatatatatatat                                                                                                                     <  1:6432732/118‑1 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatata                                                                                                                    >  1:9487037/1‑128 (MQ=255)
                        aaattatattAAAATTGTTTTTATATTTTTAATTTTATACACACATTATTATAAAATAAAATATTTTTTAAATAATATTAAAAAAATATATATAATATATTAAT‑‑tatatatatatatatatatatata                                                                                                                  <  1:4103957/120‑1 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatat                                                                                                                         >  2:9048711/1‑120 (MQ=255)
                          aTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataat                                                                                                                >  1:1076577/1‑126 (MQ=255)
                           tGAACTTAATATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATCCGATTCAAAACATATATAACATACATACAT‑‑tatatatatatatatatatatataatg                                                                                                               >  1:1537022/1‑125 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatattata                                                                                                               >  1:4323483/1‑124 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatg                                                                                                               >  1:8651158/1‑125 (MQ=255)
                             aaCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatattaagat                                                                                                             >  1:1743573/1‑122 (MQ=255)
                             aaCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatgca                                                                                                             >  2:2332538/1‑123 (MQ=255)
                             aaCTTAAAATTGTAATTAACTTTATCATTTTACACACACCTTATTAAAAAATAAAATAATTTTTACATACGATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatataatgcaat                                                                                                             <  2:7403804/128‑8 (MQ=255)
                              aattAAAATTGTAATTAACTTTTTCATTTTAAAAACAAAATATTAAAAAATAAAATAATTGTTACATAATATTCAAAACATATATAACATACATTCAT‑‑tatatatatatatatatatatataatgcaa                                                                                                            <  2:632120/126‑7 (MQ=255)
                                   aaaTTGTAATTAAATTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGt                                                                                             <  2:10497756/128‑1 (MQ=255)
                                      ttGTTATTTAATTTTTATTTTTATACACATCTTATTAAAAAATAAAATAATTTTTATATAATATTATAAAAATATATATAATATATTC‑T‑‑T‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTaaa                                                                                          <  1:10355259/128‑1 (MQ=255)
                                             tAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAat                                                                                   >  2:2994964/1‑128 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATATAAATGAAAata                                                                                  >  2:3867416/1‑128 (MQ=255)
                                              aaCTATTTAATTTTACACACACCTTATTAAAAAATAAAATATTTGTTACATAAGATTAAAAACATATATAACATACATTCAA‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGaaaa                                                                                    <  1:6004412/128‑1 (MQ=255)
                                               aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAatat                                                                                 <  2:6853008/128‑1 (MQ=255)
                                               aCTTTTTAATTTTAAACACACATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAatat                                                                                 <  2:6046941/128‑1 (MQ=255)
                                               aCTTTATAATTTTACACACACCTTATTAAAAAATAAAATACTTGTTATATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAatat                                                                                 <  2:8003576/128‑1 (MQ=255)
                                                cTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAT‑T‑‑‑‑‑‑AT‑‑‑GAAATATGTAAATTAAAATATg                                                                                >  1:7151256/1‑128 (MQ=255)
                                                  ttttAATTTTACACACCACTTATTAAAAAATAAAATAATTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGtat                                                                            <  1:6651480/128‑1 (MQ=255)
                                                    ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑ATT‑‑‑‑‑A‑‑‑‑‑‑AATATGTAAATTAAAATATGTTataa                                                                          >  1:10197495/1‑128 (MQ=255)
                                                    ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATGTATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGtat                                                                            >  1:8313884/1‑128 (MQ=255)
                                                     tCATTTTACACACAAATTATTAAAAAATAAAATACTTGTTAAATAATATTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGtata                                                                           <  2:7603562/128‑1 (MQ=255)
                                                      cATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTataata                                                                        >  2:8484756/1‑128 (MQ=255)
                                                       aTTTTAAACACACATTATTAAAAAATATAATAGTTTTTAAATACTATTCAAAACATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTataat                                                                         <  1:9315064/128‑1 (MQ=255)
                                                          ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑A‑‑‑‑‑A‑‑‑‑GCAATATGTAAATTAAAATATGTTATAATAGc                                                                      >  2:4796185/1‑128 (MQ=255)
                                                          ttACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GAAATATGTAAATGAAAATATTTTataatatc                                                                      >  2:2470969/1‑126 (MQ=255)
                                                           tACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAc                                                                   >  1:682568/1‑128 (MQ=255)
                                                               cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATATATATATA‑‑GCAATATGTAAATGAAAATATTATataat                                                                         >  1:4986783/1‑128 (MQ=255)
                                                               cacCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCAT‑‑TATATATATATATATATATATA‑A‑A‑‑‑‑‑AT‑‑‑GAAATATGTAAATGAAAATATGATATAATATCAAcag                                                                 >  2:1955155/1‑126 (MQ=255)
                                                                 ccccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGTTATAATATAAACAGTTta                                                             >  2:5463926/1‑128 (MQ=255)
                                                                  cccTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGttt                                                              <  2:5860441/128‑1 (MQ=255)
                                                                    cTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑TA‑‑‑TCAATATTTAAATTAAAATATTTTATAATCGCaagctgtt                                                              >  1:877909/1‑122 (MQ=255)
                                                                    cTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:8961530/128‑1 (MQ=255)
                                                                    cTTATTAAAAAATAAAATAATTTTTACATAATATTCAAAAAATATATAAAATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGttt                                                              <  1:4752291/128‑1 (MQ=39)
                                                                    attattaAAAAATAAAATAATTGTTAAATAATATTCTAAAAATATATAAAATACATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtat                                                            <  1:1938414/127‑1 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATTTAAATGAATATATTGTATAATAGCAACCATTtat                                                            >  1:340113/1‑128 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑ACAAAAAATAAAAAAAAATATGGTATAAGAGCAACAGATtat                                                            >  2:10112484/1‑128 (MQ=38)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATAAATATATATATATATATA‑‑‑‑‑AA‑‑‑AATATATTTATAAGAAAATATTTTATAATAGAAACCTTTtaa                                                            >  1:8134721/1‑127 (MQ=255)
                                                                         taAAAAATAAAATAATTGTTACATAAGATTAAAAAAATATATAACATACATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  1:5699708/128‑1 (MQ=255)
                                                                         aaaaaaaaaaaATATATGTTATATATTATTAAAAAAATATATAAAATATATAAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                       <  1:3575508/127‑1 (MQ=255)
                                                                           aaaaaTAAAATACTTTTTACATAATATTCAAAAAATATATAAAATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaa                                                     <  1:6123741/128‑1 (MQ=255)
                                                                            aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaa                                                    <  2:939024/128‑1 (MQ=255)
                                                                              aataaaataTTTTTTATATAAGATTAATAAAATATATAAAATATATTAA‑‑‑‑ATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                  <  1:2401191/128‑1 (MQ=255)
                                                                               ataaaataATTTTTACATAAGATTAAAAAAATATATAAAATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaa                                                   <  1:9114250/128‑1 (MQ=39)
                                                                                 aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATAAAAATATGTTATAATAGCAACAGTTTATAAAGTAAAAAAAt                                               >  2:1827155/1‑128 (MQ=255)
                                                                                  aaataTTTTTTAAATACGATTCAAAAGAAATATTACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                              <  2:6202385/128‑1 (MQ=255)
                                                                                   aataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATAT‑T‑‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGCAAACGTTTATAAATTAAAAATATAg                                             >  1:532725/1‑128 (MQ=255)
                                                                                   aataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑TCAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAAGTAAAAAAATAg                                             >  1:3799247/1‑128 (MQ=255)
                                                                                   aataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                             <  1:7027275/128‑1 (MQ=255)
                                                                                       cTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GAAATATTTAAATTAAAATATTTTATAATAGCAACCGTATATAAATTAAAAAAATATTa                                           >  1:279838/1‑128 (MQ=38)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑TCAATATGTAAATGAAAATATGATATAATAGAAAAAGTTTATAAATTAAAAAAATAGTAAat                                        >  1:8507146/1‑128 (MQ=255)
                                                                                         ttttACATAAGATTAAAAAAATATATAACATACATTTAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                       <  1:7978308/126‑1 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑A‑‑‑‑‑A‑‑‑‑GCAATATTTAAATAAAAATATTTTATAATATCAACCGTTTATAAATTAAAAAAATATTAAata                                       >  1:9658618/1‑128 (MQ=255)
                                                                                         tGTTAAATACGATTAAAAACATATATAAAATACATTCAT‑‑TATATA‑A‑ATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                       <  1:2216961/128‑1 (MQ=255)
                                                                                          tttATATACTATTCAAAACATATATATCATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                        <  2:7066422/127‑1 (MQ=255)
                                                                                           ttaaataataTTCAAAACATATATAAAATACATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                     <  2:5070231/119‑1 (MQ=255)
                                                                                               aTACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑A‑‑‑‑‑AT‑‑‑‑CAATATATAAAAAAAAATATTTTATAATATCAAACTTTAATAAAATAAAAAAATATTAAATataataa                                 >  2:2697736/1‑127 (MQ=255)
                                                                                                 aCGATTCAAAAAATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACtt                               <  1:9954303/128‑1 (MQ=255)
                                                                                                  cGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATA‑‑‑A‑‑‑‑‑A‑‑‑‑GAAATATAAAAATTAAAATATTTTATAATATAAAAATTTTATAAATTAAAAAAATATTAAAtataaaaaatatt                            >  2:1635991/1‑119 (MQ=255)
                                                                                                  ataTTAAAAACATATATAATATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                              <  1:5132117/126‑1 (MQ=255)
                                                                                                   gATTAAAAACATATATATAATATATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAt                             <  2:8645394/128‑1 (MQ=255)
                                                                                                     ttCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTAttt                           <  2:9777085/128‑1 (MQ=255)
                                                                                                      tttaaaaATATATAATATAAATTTAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATTGTATAATAGAAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTa                          <  2:3380772/125‑1 (MQ=255)
                                                                                                       cAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑TAAATATCTATATAAAAATTTTTTATAATATCAACCTTTTATAAATTAAAAAAATATTAAAtataaaaattatat                           >  1:7349107/1‑118 (MQ=25)
                                                                                                        aaaaCATATATAACATACATTCAT‑‑TATATATATATATATATATATATATAT‑‑‑‑ATAAATAAATATTTAAATAAAAATATTATATAATAACAAAATTTTAAAAATTAAAAAAATAATAAAtataaaaatta                              >  2:8878102/1‑121 (MQ=255)
                                                                                                        aaaaCATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑TAAATATATAAATGAAAATATTTTATAATATCAACAGTTTATAAATTAAAAAAATATTAAATATAATACTTAttaa                          >  2:6453941/1‑126 (MQ=37)
                                                                                                        aaaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGAAAACGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACt                        >  2:4122162/1‑128 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATATACta                       >  2:7254741/1‑128 (MQ=255)
                                                                                                          aaCATATATCAAATAAATTTAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaa                      <  1:2983071/128‑1 (MQ=255)
                                                                                                            cATATATAAAATAAATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                    <  2:10295376/128‑1 (MQ=255)
                                                                                                             atatatAACATACATTCAT‑‑TATATATATATATATATATATA‑‑‑A‑‑‑‑‑A‑‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTATATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaaa                 >  2:527401/1‑128 (MQ=255)
                                                                                                             atatatAACATACATTAAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                   <  1:3161264/128‑1 (MQ=255)
                                                                                                              tatataATATATATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                  <  2:7799410/128‑1 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAAt                >  1:7594282/1‑128 (MQ=255)
                                                                                                               atataACATACATTCATTATATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAAAACTTTATAAAGTAAAAAAATAGTATATATACTAATTATTTaataat                     >  2:3706957/1‑128 (MQ=255)
                                                                                                               atataACATACATTCAT‑‑‑‑TATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GAAATATGTAAATGAAAATATGGTATAATAGCAACCCTTTATAAATAAAAAAAATAGAAAAAATACTACTTATTTACTAATaaaa                 >  2:5633492/1‑128 (MQ=255)
                                                                                                                tataTCATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                  <  1:1248694/128‑1 (MQ=255)
                                                                                                                tataACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATTTAAATTAAAATATGTTATAATATAAACATTTTATAAATTAAAAAAATAGTAAATATAATAATTATTTACTAATaaa                  >  2:2142306/1‑128 (MQ=37)
                                                                                                                tataACATAAATTAA‑‑‑‑ATATATATATATATAAATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAAt                <  2:2809479/128‑1 (MQ=255)
                                                                                                                  taACATACATTCAT‑‑TATATATATATATATATATATATA‑A‑‑‑‑‑A‑‑‑‑GCAATATATAAATGAAAATATGGTATAATAGCAACAGTTTATAAATTAAAAAAATAGTATATAAAATACTTATTAACTTATAAAAtat              >  1:4534070/1‑126 (MQ=255)
                                                                                                                             cat‑‑tATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt     >  1:9807876/1‑128 (MQ=255)
                                                                                                                               |                                                                                                                                          
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATATA‑‑‑‑‑AT‑‑‑GCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAA  >  CP016816/311021‑311276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.