New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 768913639 (0.750)635 (0.130) 151/252 21.6 14.5% intergenic (‑140/+45) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
?CP016816 76895 = 3843 (0.790)intergenic (‑144/+41) JCVSYN2_00300/JCVSYN2_00305 UTP‑‑glucose‑1‑phosphate uridylyltransferase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 4223 total aligned reads displayed.

AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCT  >  CP016816/76764‑77018
                                                                                                                               |                                                                                                                                
aaaaTTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACaa                                                                                                                                  <  2:7337102/128‑1 (MQ=255)
    tttATATATATTATTGAACTTAAGGATGTATAATACAAATTAATAATAACAGTAAAACCCAAATTCCCCTTTAAATTCAAATAACATTATTTAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttt                                                                                                                             <  1:9466090/128‑1 (MQ=255)
    tttATATATATTAGTGAAATTTATGATGTATAATACAAATTAATAAAAACTGTACAACCCAAATTCCCCTTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑ttt                                                                                                                             <  1:5355382/128‑1 (MQ=255)
      tatatataTCAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttt                                                                                                                           >  1:7228633/1‑128 (MQ=255)
         atatatTAGTGAACTTAAGGATGTATAAAACAAATTAATAATAACTTTACAACCCAAATTCCCCTTTAAAATCAAATAACATTATATAAATATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttt                                                                                                                        <  1:2823224/128‑1 (MQ=255)
          tatatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑ttttttttt                                                                                                                       >  2:9831067/1‑128 (MQ=255)
          taaatTAGTGAACTTAATGATTTATAAAACAAATTAATAATAAATGTACAAACCAAATTACCCTTTAAAATCAAATAAAATTATATAAATATAAATTTTTTAAAGAAAAAAATTACAAC‑ttttttttt                                                                                                                       <  2:5114930/125‑1 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttt                                                                                                                      >  1:10000149/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttt                                                                                                                      >  2:256527/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttt                                                                                                                      >  1:4065512/1‑128 (MQ=255)
           atatTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTAAAATAACATTAAATAAAGATAAATAAATTAAAGAAAAAAAATACAAC‑ttattttttt                                                                                                                      >  2:8764274/1‑128 (MQ=255)
             atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAATTATTACAAC‑tttttttttttt                                                                                                                    >  1:1116453/1‑128 (MQ=255)
             atTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttt                                                                                                                    >  1:8220401/1‑128 (MQ=255)
                 gTGAACATTAGGTAGTATAATACAAATTAAAAATAACTGTAAAACCCAAATTCCCCTTTAAATTCAAATTAAATTATATAAATATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttttg                                                                                                                <  1:8757411/128‑2 (MQ=255)
                   taatttAATGATTTATATTATAAATTAATAATAAATTTAAAAAACAAATTACCCTTTAAATTCAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAAA‑ttttttttttttttgtaa                                                                                                              <  2:3550282/124‑5 (MQ=255)
                    aaCATAATGATTTATAAAACAAATTAAAAAAAACTTTAAAACCCAAATTACCCTTTAAAATCAAAAAAAATTATAAAAATATAAATTTTTTAAAGAAAAATATTACAAC‑tttttttttttttttggaa                                                                                                             <  2:963581/128‑5 (MQ=255)
                      cgtAAGGATGTATAATAAAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAACAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACt                                                                                                          <  2:8045298/126‑1 (MQ=255)
                       ttAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAA‑TTTTTTTTTTTTTTTT‑GAACTa                                                                                                         >  1:10397340/1‑128 (MQ=255)
                         aaGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGTAAATaa                                                                                                        >  1:3203820/1‑128 (MQ=255)
                           tgATTTATAATAAAAATTAATAATAACTGTAAAACCCAAATTTCCCTTTAAATTAAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACata                                                                                                    <  1:1218821/127‑1 (MQ=255)
                           gtatttataATAAAAAATAAAAATAACTTTAAAAACAAAATTAACCTTTTAATTAAAATAAAATTTTATAAATTTAAATTTTTTAAACTAAAATATAACAACTTTTTTTTTTTTTTTTTGGAACTAAc                                                                                                       <  2:10219375/123‑1 (MQ=255)
                           ggATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑cttttttttttttttttaaaaaaaaa                                                                                                      >  1:3888305/1‑118 (MQ=255)
                             aTGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAAAATTACAAC‑TTTTTTTTTTTATTTT‑Gaacaaacaaaa                                                                                                   >  1:2193850/1‑125 (MQ=255)
                              tGTTTAATACAAATTTATAATATATTTACAACCCAAATTACCCATTAAATTTAAAAAAAATTATATAAAGATAAATTTTTTAAATAAAAATTTTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACAtata                                                                                                  <  1:6577175/128‑1 (MQ=255)
                                tataATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAAAAAAAATATaa                                                                                                 >  2:8454729/1‑128 (MQ=255)
                                taaaataAAAAATAATAATAAATTTAAAACACAAAATACCATTTAAATTCAAAAAAAATTATATAAAGATAAATTTTTTAAACAAAAATATTACAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATaa                                                                                                 <  2:6307112/125‑1 (MQ=255)
                                 ataataAAAATTAAAAAAAAATTTACAACCCAAAATCCCCTTTAAATTAAAAAAACATTATTTAAATATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtt                                                                                               <  2:3349586/128‑1 (MQ=255)
                                  taataCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAAttt                                                                                              >  1:1630047/1‑128 (MQ=255)
                                   tataAAAATTAAATATAAAATTAAAACCCAAATTCCCCTTTAAAATAAAAAAAAATTATTTTAATTTAAATTTTTTTAAGTAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtttt                                                                                             <  1:1838762/127‑1 (MQ=255)
                                   aataataataaataAAAACTGTAACACCCAAATTCCCCTTTTAAATTAAATTAAATTATAATAAGATAAAATTTTTAAATAAAAATATTTAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAAtttt                                                                                             <  1:8951392/122‑1 (MQ=255)
                                   aataAAAATTAATTATTACTTTAAAAACCAAATTCCCCTTTAAATTAAAAAAACATTATATAAATATAAATTTTTTAAATAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTa                                                                                            <  1:9987865/128‑1 (MQ=255)
                                    aaaaaaaTTAATAATAAATTTACAAACCAAAATTACCTTTAAATTTAAATAAAAATATATAAATATAAATTTTTTTAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTa                                                                                            <  1:2409045/124‑1 (MQ=255)
                                     taaaaaTTTATAATAAATTTAAAACCCAAATTCCCCTTTAAATTCAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTAc                                                                                           <  1:9111381/125‑1 (MQ=255)
                                     taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTGAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTATTTATATTT‑AAAATAAAATAAAATTTTaa                                                                                           >  2:2412457/1‑127 (MQ=255)
                                     taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTATTTTTTTTTT‑TAAATAACATAAAATTTTAc                                                                                           >  1:6179170/1‑128 (MQ=255)
                                     taCAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTATAc                                                                                           >  1:561299/1‑128 (MQ=255)
                                       cAAAATAATAATAACATTACAAACCAAATTCACCATTTAATTTAAATAAAATTATATAAAGATAAATTTTTTAAATAAAAAAATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                        <  2:4938250/128‑1 (MQ=255)
                                        aaaTTAATAATTAAATTAAAAAACAAATTAACCTTTAAATTAAAATTACATTATTTAAATATAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                        <  2:7093705/128‑1 (MQ=255)
                                        aaaTTAATAATAACTTTACAACACAAATTGCCCTTTAAATTAAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCaa                                                                                        <  2:1142197/128‑1 (MQ=255)
                                           ttAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAACTAAAATTTAATTTTACCAatta                                                                                     >  1:5791145/1‑128 (MQ=255)
                                              ataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                  >  1:8591938/1‑128 (MQ=255)
                                              ataataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACAAATAATTTTACCAAtaatta                                                                                  >  2:2767829/1‑128 (MQ=255)
                                              ataataaATGTTAAACACAATATGCACTTTTAATTTAAATAAAAATTTTTAAATTTAATTTTTTTAAATAAAAATTTTA‑AAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAAttatta                                                                                  <  1:3023003/128‑1 (MQ=255)
                                               taataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAACATATAATTTTACCAATTATTAg                                                                                 >  2:4732601/1‑128 (MQ=255)
                                                 ataaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTGGAACTTCAATATAATTTTACATattatttc                                                                                 >  1:3533490/1‑126 (MQ=255)
                                                   aaCTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTGTTTTTTTTGGATATTACATATAATTTTACAAATTATTAAaatt                                                                             >  1:4987881/1‑128 (MQ=255)
                                                        tACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATTTATTTTTAACAATTATTAAaatttaatt                                                                        >  2:8592039/1‑124 (MQ=255)
                                                        tACAACACAATTTGCACTTTAATTTAAAATAACATTAAATAAAGATAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                        <  1:4595001/128‑1 (MQ=255)
                                                        tACAAACAAAATTAACCTTTAATATAAAATAACATTAAATAAATATAAATTTTTTAAATAAAAATAATA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaat                                                                        <  1:6786461/128‑1 (MQ=255)
                                                          cAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGaatttcaatttc                                                                     >  2:5917994/1‑128 (MQ=255)
                                                              ccAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTTAAAATAAAAAAAAATTTTACAAATTATAAAaatttaaattaaaa                                                                   >  2:1856027/1‑124 (MQ=255)
                                                              caaaaTTACACTTTAAATTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTAAAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAg                                                                 <  2:6119513/126‑1 (MQ=255)
                                                               cAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAAATAAAAATAAATTTAAACAATTATTAAAATTTCAATTTACCAGa                                                                >  2:9218820/1‑128 (MQ=255)
                                                                aaaaTCACCTTTAAATTTAAATAACATTATATTAAGATAAATTTTTTAAAGAAAAATTTTAAAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGAt                                                               <  1:7715999/128‑1 (MQ=255)
                                                                 aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAAAATAAAATTTTACCAATTTTTATaatttaaattaaccata                                                                >  1:2000340/1‑121 (MQ=255)
                                                                 aaTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAA‑TTTTATTTATTTTTTT‑TAACAAACAAAAAATTTTACAAATTATAAGAATTTAATTTTAAAAGaa                                                               >  2:6468033/1‑127 (MQ=255)
                                                                  aTTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTT‑‑GAAAGAACATATAATTTTAACAATTATTTTaaattaaatttaaaatatta                                                             >  2:3196601/1‑119 (MQ=255)
                                                                   ttCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAAAAAAATAAAATTTTACAAATATTTAAAAATTAAATTTcacataaga                                                             >  1:7888420/1‑123 (MQ=255)
                                                                   ttCCCATTTAAATTAAAATAAAATTATATAAAGATAAATTTTTTAAATAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATg                                                              <  2:752091/128‑1 (MQ=255)
                                                                    tcaaatttATATTAAAATTAAATTATATAAATATAAATTTTTTAAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGaa                                                            <  1:7483064/123‑1 (MQ=255)
                                                                    taaccTTTAAATTAAAATATAATTATATAAAGATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGaa                                                            <  2:6879105/125‑1 (MQ=255)
                                                                      cccTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAAtt                                                          >  2:1671659/1‑128 (MQ=255)
                                                                       catttAAATTAAAATAAAAATATATATATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTg                                                         <  1:3371131/126‑1 (MQ=255)
                                                                          ttAAATTCAAATAACATTATATAAATATAAATTTTTTAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAtt                                                      <  2:8934800/128‑1 (MQ=255)
                                                                           tAAATTAAAATAACATTATATAAATCTAAATTTTTTAAATTAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGAttt                                                     <  1:9643480/128‑1 (MQ=255)
                                                                            taaataaaaTAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttc                                                    <  2:3733199/122‑1 (MQ=255)
                                                                            aatataaaaTAAAATTAATTAAATAAAAATTTTTAAAATAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGTTGAATTGATttc                                                    <  2:5723410/122‑1 (MQ=255)
                                                                            aaaTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGACCTAACATATAATTTTACCAATTTTTATAATTTCAATTTCACAGAAGAAATGATttc                                                    >  1:9273309/1‑128 (MQ=255)
                                                                              aTTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAAATAACATATAATTTTACAAATTATTAGAATTTCAATTTCAAAGATGAAATGATttct                                                   >  2:4312847/1‑128 (MQ=255)
                                                                              aTTAAAATAAAATTATATAAATATAAATTTTTTAAATAAAAATATTACAA‑‑‑ATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATttcttc                                                 <  2:4133263/128‑1 (MQ=255)
                                                                                taaaaTAACATTATATAAATATAAATTTTTTAAACAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTtcttct                                                <  1:2626697/126‑1 (MQ=255)
                                                                                   aaTAACATTATATAATTATAAATTTTTTAAATAAAAATATTAAAAC‑TTTTTTTTTTTTTTTTTGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                              <  2:6698354/128‑1 (MQ=255)
                                                                                   aaTAAAATTATATTAATTTTAATTTTTTTAATTAAAATTTTTAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCtaa                                              <  1:3675774/128‑1 (MQ=255)
                                                                                     tAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑‑TTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGCTTATTTTATTACTTATaataat                                          >  1:5178927/1‑128 (MQ=255)
                                                                                      aaCATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGAAACTAACATATAATTTTAAAAATTTTTAGAATTTAAATTACAAAAATGAATTTTTTTATTAtaataa                                           >  1:478220/1‑128 (MQ=255)
                                                                                           tatataAATATAAATTTTTTAAATAAAAATATTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTc                                     <  2:2031016/128‑1 (MQ=255)
                                                                                            atataAATTTAAATTTTTTTAAGAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCt                                    <  1:1417209/128‑1 (MQ=255)
                                                                                             tttaaatttttaTTTTTTTAATTAAAATTTTATATC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                   <  2:7888420/117‑1 (MQ=255)
                                                                                             tataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGTAAAAAAAATATAATTTTACCAATTATTATAATTAAAATTTAAAATATAAATTTATTTATTATAATAAtttttata                                   >  2:1303024/1‑123 (MQ=255)
                                                                                              ttaAATATAAATTTTTTAAATAAAAATATTAAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCta                                   <  2:9094618/127‑1 (MQ=255)
                                                                                              ataaataaAAATTTTTTAAATAAAAATATTACAA‑‑ATTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtat                                  <  2:2228610/128‑1 (MQ=255)
                                                                                              ataAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTCAAATAAAAATA‑AATTTTACAAATTATTAAAATTTAAATTTAAAAAATTAATTTATTTATTAAAAAAAtttttataa                                  >  2:5481974/1‑122 (MQ=255)
                                                                                               taAAGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTTGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtata                                 >  1:9811999/1‑128 (MQ=255)
                                                                                                aaaGATAAATTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTTATATAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCtatat                                >  2:5286383/1‑128 (MQ=255)
                                                                                                    aTAAATTTTTTAAATAAAAATATTA‑AAA‑ATTTTTTTTTTTTTTTGTATATAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGAt                            <  2:9433549/128‑1 (MQ=255)
                                                                                                    aTAAATTTTTTAAAGAAAAATATTACAACTTTTTTTTTTTTTTTTTGTAAAAAAATTAAAATTTTACAAATTTTTATAATTAAAATTAAAAATATTATTTTATTTTTTATAAAAATTTTTatatatta                              >  2:2948635/1‑126 (MQ=255)
                                                                                                       aaTTTTTTAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTAACAGATGAATTTATTTATTATAATAATTTTTATATATTTATGtt                         >  2:4544598/1‑128 (MQ=255)
                                                                                                         ttttttAAAGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGtttt                       >  2:1492321/1‑128 (MQ=255)
                                                                                                         ttttttAAA‑AAAAATATTTCAA‑‑TATTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGttttt                      <  2:10415873/128‑1 (MQ=255)
                                                                                                                aattaaatttttAAAAA‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTatat                 <  1:8024892/118‑1 (MQ=255)
                                                                                                                 aGAAAAATATTACAAC‑‑TTTTTTTTTTTTTTTGAAACTAAAAAAAAATTTTAAAAATTATTATAATTTAAATTACAAAGAAGAATTTATTTATTATAATAATTTTTATATATATATTTTTTTTatatat               >  2:3907789/1‑126 (MQ=255)
                                                                                                                      aataatATAAC‑‑TTTTTTTTTTTTTTTGGAACTAAAATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATc          <  1:10185250/128‑1 (MQ=255)
                                                                                                                      aaTATTACAAC‑TTTTTTTTTTTTTTTT‑‑AACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTTATTTATTCTAATAATTTTTATATATACATTTTTTTTATATCTAAAACa         >  2:7713119/1‑128 (MQ=255)
                                                                                                                      aaTATTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATTTTTTTACCAATTTTTATAATTTCAATTTCACAGATGTATTGATTTATTATAATAATTTTTATATATTAATTTTTTTTTTATATAAAta          >  1:5982124/1‑127 (MQ=255)
                                                                                                                       atatTACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTATAATAATTTGTCTATATAAATTTTTTTTATATATAAATCa         >  1:4411744/1‑128 (MQ=255)
                                                                                                                       atatTACAAC‑‑TTTTTTTTTTTTTTTGGAAATAAAATATAATTTTACAAATTATTAGAATTTCAATTTCACAGATTATTTGATTTCTACTAATATTTTTTATATTTTTATGTTTTTTATATATAAAtaa         >  1:7000703/1‑126 (MQ=255)
                                                                                                                       atatTAAAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCa         <  1:638191/128‑1 (MQ=255)
                                                                                                                        tatTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCa         <  2:8232919/128‑1 (MQ=255)
                                                                                                                          ttACAAC‑‑TTTTTTTTTTTTTTTGGAACTAACATAAAATTTTACCAATTATTTGAATTTAAATTTAACAGATGAATTGATTTCTTCAAATAATTTGTCTAAATAGATGTTTATTAAATCATAAGCAGTg      >  1:8439640/1‑128 (MQ=255)
                                                                                                                           tACAAC‑‑TTTTTTTTTTTTTTTGCAAAAAAAAAAAAAATTAACCAATTATAAAAATTTAATTTTCACATATTAATTTTTATATAATAAAAATTTGTATATATAATTGTTTTTTATTTCTAAATCattaa     >  1:424589/1‑124 (MQ=255)
                                                                                                                               |                                                                                                                                
AAAATTTATATATATTAGTGAACTTAAGGATGTATAATACAAATTAATAATAACTGTACAACCCAAATTCCCCTTTAAATTCAAATAACATTATATAAAGATAAATTTTTTAAAGAAAAATATTACAAC‑TTTTTTTTTTTTTTTTGGAACTAACATATAATTTTACCAATTATTAGAATTTCAATTTCACAGATGAATTGATTTCTTCTAATAATTTGTCTATATAGATGTTTTTTATATCTAAATCAGTGATCT  >  CP016816/76764‑77018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.