| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP016816 | = 437880 | 593 (0.430) | 405 (0.230) +ATAT |
87/188 | 25.7 | 34.8% | intergenic (‑184/+238) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease |
| ? | CP016816 | 437881 = | 802 (0.450) | intergenic (‑185/+237) | JCVSYN2_01985/JCVSYN2_01990 | glycosyl transferase/ABC transporter permease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 465 total aligned reads displayed.
GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |||||| GAAACTTATTTTTGTATTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATTAAGAAAAGAAAAAACATACATATTACCTATATAGATAATG‑‑A > 2:1574249/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 1:1948630/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 1:895433/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 2:1120878/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 2:2370923/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑AT > 2:2523261/1‑128 AAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAAAATCCATATTACATATAGAGTTAATG‑‑AT > 1:2781660/1‑128 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATA < 2:2456633/128‑1 AACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATA > 1:2841478/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCATAAACGTCCATATTACCTATAGAGTTATTG‑‑ATATAT > 2:634991/1‑128 TTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATAT > 2:137580/1‑128 TATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATA > 2:2358273/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 2:3363924/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 1:1801718/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 2:165566/1‑128 ATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATAT > 2:3684577/1‑128 TTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATA > 2:3464209/1‑128 TTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATAT > 2:929829/1‑128 TTTTGTAGTTGTAAGATTAATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGGAAATGAATAAAAGCAAAAACCTCAAAATTACCTATAGAGTTAATG‑‑ATATATATAT < 1:135699/128‑1 TTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA > 2:411688/1‑128 TTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATA < 1:726141/128‑1 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATAT > 1:2566738/1‑128 TTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATAT < 2:2010086/128‑1 tacaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTACATATTACCTATAGAGTTAATG‑‑ATATATATATATA > 1:3147182/9‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATA > 2:2829695/1‑128 TGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATA > 1:1020287/1‑128 acaaaaaTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATAT > 1:2225497/8‑128 GTAGTTGTAAGTTTGATTTTTAATATATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATAT < 1:3787799/128‑1 agattTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATAT < 1:3102422/123‑1 AGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAATTATTTTATTAAATGAAGCAAAGCTAAAACCTCCTTATTAACTATATAGTTTATG‑‑ATATATATATATATAT > 1:1658841/1‑128 GTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACAAATAGAGTTAATG‑‑ATATATATATATATATA > 2:2123716/1‑128 taGTAATTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAATCAAAAACCTCCATATTACCTATAGAGATAATG‑‑ATATATATATATATATAT < 1:2507160/126‑1 TTGTAAGTTTCATTTTTAATAAATATTAGAAATAAATATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAATCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATAT < 2:2968913/128‑1 TTGTAAGTTTAATTTTTAATAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTAGTAAATGAATAAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATAT < 2:1420402/128‑1 TGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACATCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATA > 2:1453183/1‑128 GTAAGTTTCATTTTTAATAAATATTATAAATAAAAATTTTATATTTAAAATAAATATTTTAGTAAATGAATCAAAGCAAAAACCACCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT < 1:441473/128‑1 GTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATAT > 1:3598226/1‑128 TAATTTTAATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 1:812508/128‑1 TAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 1:2312245/128‑1 TAAGATTCATTTTTAATAAATATTTGAAATAAAAATTTTATTTATAAAATAAATATTTTATGAAATTAAGAAAAGAAAAAACCTCAATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATA < 2:1905838/128‑1 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGAAAAGCAAAAACCTCCATATTAACTATAGAGTTAATG‑‑ATATATATATATATATATATAT < 2:3625384/128‑1 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATAT > 2:3209519/1‑128 AAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGAAAAAACCTCCCTATTACCTATAGAGATAATG‑‑ATAAATATATAAATATATATAa > 2:2249121/1‑127 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATA > 2:553395/1‑128 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATA < 1:61397/128‑1 AGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATA > 1:1742814/1‑128 tTTTCATATTAAATATATATTAGATATAAAAATTGTATTTTTAAAATATATATTTTATTAAATTAAGCAAAGAAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAT < 1:1517097/127‑1 GTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATAT > 2:1811317/1‑128 TTTCATTTTTAATAAATATTAGACATAAAAATTGTATTTTTAAAATAAATATTTTAGTAAATGAAGCAAAGCAAAAAACTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA < 1:1125287/128‑1 TTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATA > 1:3623766/1‑128 TTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT > 2:3108487/1‑128 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATta > 2:3588852/1‑126 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑AT > 1:1294448/1‑128 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑AT > 2:464950/1‑128 CATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGAAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATta > 2:835625/1‑126 ATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTATGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATA < 2:2781976/128‑1 TTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATgc > 2:223791/1‑121 TTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATtcacg > 2:1264313/1‑123 TTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATAaaa > 2:2656201/1‑125 TTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATgcaagcgat < 1:506614/128‑10 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgcaagcga < 1:2866330/128‑9 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATT‑‑ATTTATATAAATATATATATATATATgaaatcta > 2:1525672/1‑120 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAatcacgcga > 1:2019207/1‑119 TAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgcaatcta > 2:2755433/1‑120 TAAATATTAGAAATAAAAATTTTATTTTTAAAATAAATATTTTATGAAATGAATCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATgcaagcg < 2:1171115/128‑8 AAATATTATAAATAAAAATAGTATATTTAAAATAAATATATTATGAAATGAACCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATcattaactct < 1:2739847/128‑11 tATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATATGCAAGCG < 1:2975175/127‑1 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATCATATATataaga > 1:2169022/1‑122 AATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATgaaagcgat > 2:3756214/1‑119 TATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCA > 2:1078940/1‑128 TTATAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAATCAAAGCAAAAACCTCCATATTAACTATATAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGC < 1:1052673/128‑1 TTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATAT‑T‑CAAGCGATCAGC > 2:2618423/1‑128 TAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATATatatatatataa > 1:3076507/1‑116 AAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATtg > 2:885723/1‑126 aaatatTATATTTAAAATAAATATTTTAGGAAATTAAGCAAATCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGT < 1:3881561/122‑1 AAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATATgcaatcgat > 1:2352802/1‑88 TAAATATTTTATGAAATGAAGCAAAGAAAAAACCTCAATATAAACTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGA < 1:929829/128‑1 ATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGa > 1:1379111/1‑127 TTTTATTAAATGAATCATAGCAAAAACATCCATATTATCTATAGAGATAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCT < 1:1552998/128‑1 tGGAAATGAATCAAACCAAAAACAACAATATTACCTATAGAGTTAAT‑‑‑‑TATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAA < 2:1024697/127‑1 AGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGAAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGTGTTGGTCTTAAA > 1:2084408/1‑128 GAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGTAGAAATTTATATATGAGTTGTTATTAAATTTTTAG > 1:3361319/1‑128 GCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGAATAAAATGGTTAAATTTATATCTGAGTTGGTCTTAAATTTGTAGTTT > 1:3387981/1‑128 AAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTATATTTGTAGTTTTT > 1:587297/1‑128 AAGCAAAAACCTCCATATTACCTATAGAGTTAATGATATATATATATATATATATATATATAT‑ATATATGCAAGCGAACAGAATAAAATGGATAAATTTATATCTGAGTTGATCTTAAATTTATAGTT > 1:1866093/1‑128 AGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTGGGTCTTAAATTTGTAGTTTTTAT > 1:264102/1‑128 CAAAAACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATAT‑T‑CAATCGATCAGCTTAAAATGGTGAAATATATATCTGAGTTTGTCTTAATTTTGTAGTTTATTTTT > 1:2435743/1‑128 AAAAACCTCTATATTACCTATAGAGTTATT‑‑‑‑TATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTA < 1:3723046/128‑1 AACCTCCATATTACCTATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATAT‑T‑CAAGCGATCAGCATAAAATTGTGATATTTAGATCTGAGTTTGTCTTATATTTGTAGTTTTTATTTATAG > 1:3459269/1‑128 ACCTATAGAGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCTATCAGCATAAAATGGTGAAATTTATATCTGAGTTGATCTAAAATTTGTAGTTTTTATTTATATTTTATAAAGTTA > 1:3310231/1‑128 TATAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAA < 1:3690184/128‑1 TAGAGTTAATG‑‑ATATATATATATATATATATATATAT‑ATATATTCAAGCTATCAACATAAAATTGTTAAATTTAGATCTGATTTTGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGATAATt > 2:1230000/1‑127 AGTTAATG‑‑‑‑ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTA < 1:1202822/128‑1 ATG‑‑ATATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGAT < 1:32225/128‑1 taatTATATATATATATATATATTTAT‑TTATATGCAATCGATAAGCTTAAAATGTTGTATTTTATATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 2:3269342/124‑1 tATATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTT < 1:2129930/127‑1 tatTATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTT < 1:1249401/125‑1 TATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAATATGGTGATATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAATTTAATAATTTAGATATTT > 1:3262256/1‑128 tTATATATATATTTATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTCGAGCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTA < 2:699675/127‑1 ATATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTA < 2:1723601/128‑1 |||||| GAAACTTATTTTTGTAGTTGTAAGTTTCATTTTTAATAAATATTAGAAATAAAAATTGTATTTTTAAAATAAATATTTTAGGAAATGAAGCAAAGCAAAAACCTCCATATTACCTATAGAGTTAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP016816/437754‑437880‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATATATATATATATATATATAT‑ATATATGCAAGCGATCAGCATAAAATGGTGAAATTTAGATCTGAGTTGGTCTTAAATTTGTAGTTTTTATTTATAGTTTATAAAGTTAATAATTTAGATTTTTAA > CP016816/437881‑438007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |