Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP016816111,4670GT66.9% 4220.6 / inf 4845V93F (GTT→TTT) JCVSYN2_00450ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (902/697);  new base T (1836/1391);  total (2753/2092)
Fisher's exact test for biased strand distribution p-value = 7.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.59e-01

Only 100 of 4900 total aligned reads displayed.

ATTAACTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCTTTAAA  >  CP016816/111340‑111594
                                                                                                                               |                                                                                                                               
 ttAACTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGt                                                                                                                                >  2:1981890/1‑128 (MQ=255)
  taactaacACTTTAACTAATATGTTAGAGTCAAATCGTTATATTGCTAATGGATCAATTAAGTATTATCCAAAAAAAGCTCCTAGAGAACATCAATCATCTGTTTTTAAAAAATATACTTAATTACtt                                                                                                                               >  2:527131/1‑128 (MQ=255)
   aaCTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTTATTTATTTg                                                                                                                              >  1:7287355/1‑128 (MQ=255)
    aCTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATTAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGa                                                                                                                             >  1:8831093/1‑128 (MQ=255)
    aCTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGa                                                                                                                             >  1:7949651/1‑128 (MQ=255)
      tAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGt                                                                                                                           <  1:5749110/128‑1 (MQ=255)
       taaaCTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGtt                                                                                                                          <  1:2024003/127‑1 (MQ=255)
       aaaaCTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGtt                                                                                                                          <  1:3946132/128‑1 (MQ=255)
       aaaaCTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGtt                                                                                                                          >  2:8280450/1‑128 (MQ=255)
          tatttAACTAATATGTTAGAGTCAAATGGTTATATTTCTAATGTATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCa                                                                                                                       <  2:6206943/126‑1 (MQ=255)
            tttAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATa                                                                                                                     >  2:7384941/1‑128 (MQ=255)
             ttAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATaa                                                                                                                    >  2:2931300/1‑128 (MQ=255)
               aaCTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATaaaa                                                                                                                  <  2:1639208/128‑1 (MQ=255)
                     tatGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTTTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCtt                                                                                                            >  2:8656714/1‑128 (MQ=255)
                     tatGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCtt                                                                                                            >  2:4144823/1‑128 (MQ=255)
                     tatGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCAGAAAAATTCtt                                                                                                            >  2:4309587/1‑128 (MQ=255)
                     tatGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCtt                                                                                                            <  2:7029774/128‑1 (MQ=255)
                       tGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTa                                                                                                          <  1:2706082/128‑1 (MQ=255)
                        gTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAg                                                                                                         <  1:6898327/128‑1 (MQ=255)
                         ttatattCAAATTGTTATATTGCTAATGGATCAATTATGTATTATCAAAATAAAGATACTAGATAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGa                                                                                                        <  2:5614320/122‑1 (MQ=255)
                         ttAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGa                                                                                                        <  1:5243913/128‑1 (MQ=255)
                          tAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaa                                                                                                       >  1:8123027/1‑128 (MQ=255)
                           agagTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaaa                                                                                                      >  2:8068134/1‑128 (MQ=255)
                           agagTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaaa                                                                                                      <  2:7208158/128‑1 (MQ=255)
                           agagTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaaa                                                                                                      <  1:7451688/128‑1 (MQ=255)
                           agagTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaaa                                                                                                      <  1:1859143/128‑1 (MQ=255)
                                cAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGaaa                                                                                                      >  1:6076011/1‑123 (MQ=255)
                                  aaTGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTc                                                                                                              <  1:1488047/113‑1 (MQ=255)
                                      gTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGa                                                                                           <  1:1012249/128‑1 (MQ=255)
                                               cTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGaaaa                                                                                        <  1:5412210/122‑1 (MQ=255)
                                               cTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAAtt                                                                                  >  2:2548819/1‑128 (MQ=255)
                                               cTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAAtt                                                                                  >  2:9507496/1‑128 (MQ=255)
                                                  aTGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTAATTTAGTTGAGTTTCATAAAAATTCTTTAGAAATTGATTCTAGAAAAGGAATTaaa                                                                               >  1:4249353/1‑128 (MQ=255)
                                                     gATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGa                                                                                     <  1:5060998/119‑1 (MQ=255)
                                                      aTCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAAt                                                                           >  2:6701218/1‑128 (MQ=255)
                                                       tCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATa                                                                          <  2:1449384/128‑1 (MQ=255)
                                                        cAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATAc                                                                         >  1:3049565/1‑128 (MQ=255)
                                                            tATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGaa                                                                                                 >  2:4785467/1‑100 (MQ=255)
                                                             aTGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACaataa                                                                    >  1:3798966/1‑128 (MQ=255)
                                                              tGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAATTA‑Aataata                                                                  >  1:4739968/1‑128 (MQ=255)
                                                               gTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAataata                                                                  <  2:8963783/128‑1 (MQ=255)
                                                                  ttatCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTC‑TTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATaaaaa                                                              >  1:8328149/1‑128 (MQ=255)
                                                                   tatCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAATGGAATTAAAAAATTCAATAATaaaaa                                                              >  2:4944139/1‑128 (MQ=255)
                                                                   tatCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATaaaaa                                                              >  2:2774728/1‑128 (MQ=255)
                                                                   tatCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATaaaaa                                                              >  1:2873389/1‑128 (MQ=255)
                                                                    atCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATtataaa                                                             >  1:170603/1‑128 (MQ=255)
                                                                    atCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTTAAAAATACAATAATaaaaaa                                                             >  1:708474/1‑128 (MQ=255)
                                                                       cAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAAtt                                                          >  1:9354481/1‑128 (MQ=255)
                                                                          aTAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTaaa                                                       <  2:463775/128‑1 (MQ=255)
                                                                          aTAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTaaa                                                       <  1:5885329/128‑1 (MQ=255)
                                                                          aTAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTaaa                                                       <  2:7678446/128‑1 (MQ=255)
                                                                           aaaaGCTACTAGAGAAAATGAATCAGCTTTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAg                                                      <  2:5972079/127‑1 (MQ=255)
                                                                             aaGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTATAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGAt                                                    >  1:8530223/1‑128 (MQ=255)
                                                                             aaGCTACTAGAGAAAATGAATCAGCTGTTATTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGAt                                                    <  2:9148424/128‑1 (MQ=255)
                                                                              aGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATg                                                   <  2:6569631/128‑1 (MQ=255)
                                                                               gCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAATTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGc                                                  >  1:1173263/1‑128 (MQ=255)
                                                                                 tactaGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCtt                                                <  1:7602286/128‑1 (MQ=255)
                                                                                   ctaGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTATACAAAGTGAATCTAGAAAAGGAATAAAAAAATACAATAATAATAAAATTAAAGATGCtata                                              >  1:2196536/1‑128 (MQ=255)
                                                                                    taGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTAt                                             >  2:5801634/1‑128 (MQ=255)
                                                                                     agagAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTAtt                                            <  2:5417465/128‑1 (MQ=255)
                                                                                      gagaAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTTAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGATTTAttt                                           >  2:4481420/1‑127 (MQ=255)
                                                                                      gagaAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTg                                           <  1:2532479/128‑1 (MQ=255)
                                                                                       agaAAATGAATCAGCTGTTTTTAAAAAAGATACTTATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGa                                          <  2:2367802/128‑1 (MQ=255)
                                                                                       agaAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGa                                          >  2:1810458/1‑128 (MQ=255)
                                                                                       agaAAATGAATCAGATGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGa                                          <  1:6373652/128‑1 (MQ=255)
                                                                                         aaaaTGAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGAcc                                        <  1:7785369/128‑1 (MQ=255)
                                                                                         aaaaTGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGAcc                                        <  2:1103472/128‑1 (MQ=255)
                                                                                          aaaTGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCa                                       <  1:5588334/128‑1 (MQ=255)
                                                                                              gAATCAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTaa                                   <  1:1365816/128‑1 (MQ=255)
                                                                                               aaTCATCGGTTTTTAAAAAAGCTACGGATGTATTTGAGTTTCATAAAAATGCTTTATAAAGTGAATCTAGAAAAGGAATTAAAAAATACAAAAATAAAAAAATTAAAGATGCGGTATTGACCATaaaa                                  <  2:6861868/128‑1 (MQ=255)
                                                                                                  cAGCTGTTTTTAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGaa                               <  2:8831093/128‑1 (MQ=255)
                                                                                                         ttttAAAAAAGATACTGATTTATTTGAGATTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTagaag                        <  1:236500/128‑1 (MQ=255)
                                                                                                          tttAAAAAAGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTagaaga                       <  2:3450080/128‑1 (MQ=255)
                                                                                                          tttAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTagaaga                       >  1:4595935/1‑128 (MQ=255)
                                                                                                             aaaaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTagaaga                       >  1:9000406/1‑125 (MQ=255)
                                                                                                             aaaaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATc                    <  2:2214023/128‑1 (MQ=255)
                                                                                                             aaaaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATc                    <  2:7549292/128‑1 (MQ=255)
                                                                                                             aaaaaaGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATc                    <  1:8660758/128‑1 (MQ=255)
                                                                                                             aaaaaaGATAATGATTTATTTGATTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATTCTTTATTGACCATTAAAGAATTAGAAGAATc                    <  2:5088420/128‑1 (MQ=255)
                                                                                                              aaaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCa                   <  2:3959909/128‑1 (MQ=255)
                                                                                                              aaaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCa                   <  1:4103179/128‑1 (MQ=255)
                                                                                                               aaaaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATTATATAAAAATTAAAGATGCTTTATTTACCTTTAAAGAATTAGAAGAATCaa                  >  1:6551007/1‑128 (MQ=255)
                                                                                                                 aaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACt                >  1:6718124/1‑128 (MQ=255)
                                                                                                                 aaGATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACt                >  1:3402616/1‑128 (MQ=255)
                                                                                                                 aaGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACt                >  1:3182661/1‑128 (MQ=255)
                                                                                                                   gATACTGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAATATGCTTTTATGACCATTAATGAATTAGAAGAATCATCTAt              >  1:3595822/1‑128 (MQ=255)
                                                                                                                   gATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTAt              <  1:4455978/128‑1 (MQ=255)
                                                                                                                   gATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTAt              <  2:7872512/128‑1 (MQ=255)
                                                                                                                        tGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAAt         >  2:1281179/1‑128 (MQ=255)
                                                                                                                        tGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAAt         >  2:6393066/1‑128 (MQ=255)
                                                                                                                        tGATTTATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAAt         >  2:308878/1‑128 (MQ=255)
                                                                                                                        tGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAATGAATTAAAAAATACAATAATAAAAAAATTAAAGAAGCTTTATTGACCATTAAAGAATTAGAATAATCAACTAAAGAAt         >  2:3780945/1‑128 (MQ=255)
                                                                                                                           tttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTTACCATTAAAGAATTAGAAGAATCAACTATTGAATCtt      >  1:9185610/1‑128 (MQ=255)
                                                                                                                           tttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCtt      >  2:327427/1‑128 (MQ=255)
                                                                                                                            ttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTa                                              >  2:9338506/1‑87 (MQ=255)
                                                                                                                            ttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCttt     >  2:8505923/1‑128 (MQ=255)
                                                                                                                            ttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCttt     <  1:4895571/128‑1 (MQ=255)
                                                                                                                            ttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCttc     >  1:6239811/1‑127 (MQ=255)
                                                                                                                            ttATTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATGAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTagaaga                       >  1:9615062/1‑110 (MQ=255)
                                                                                                                             tAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAGAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCttta    <  2:3621533/128‑1 (MQ=255)
                                                                                                                               |                                                                                                                               
ATTAACTAAAACTTTAACTAATATGTTAGAGTCAAATGGTTATATTGCTAATGGATCAATTATGTATTATCCAAATAAAGCTACTAGAGAAAATGAATCAGCTGTTTTTAAAAAAGATACTGATTTAGTTGAGTTTCATAAAAATTCTTTAGAAAGTGAATCTAGAAAAGGAATTAAAAAATACAATAATAAAAAAATTAAAGATGCTTTATTGACCATTAAAGAATTAGAAGAATCAACTATTGAATCTTTAAA  >  CP016816/111340‑111594

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑