BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP016816	436,792	0	C	A	64.8%	2897.9 / inf	4867	R302I (AGA→ATA)	JCVSYN2_01985	glycosyl transferase
Reads supporting (aligned to +/- strand): ref base C (921/788); new base A (1698/1447); total (2623/2244)
Fisher's exact test for biased strand distribution p-value = 9.52e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-14

Only 100 of 5219 total aligned reads displayed.

TTCACAAACTAGCTAGTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGGTTGTTATA  >  CP016816/436665‑436919

ttCACAAACTAGCTAGTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCattcattc                                                                                                                                 <  1:6586861/128‑1 (MQ=255)

 tCACAAACTAGCTAGTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAATACGCTCAAAATCATTCATTCt                                                                                                                                >  1:1638142/1‑128 (MQ=255)

      aaCTAGCTAGTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTAATTATTTGAt                                                                                                                           >  2:9029690/1‑128 (MQ=255)

            ctagTTTATAGTTATTATCTAGTTTAATATCAGTTTGTTTACTAGTAATTAAAGAATTATTCTTTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAAtt                                                                                                                     <  1:6903741/128‑1 (MQ=255)

            ctagTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAAtt                                                                                                                     >  2:1656385/1‑128 (MQ=255)

            ctagTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAttt                                                                                                                     >  2:415419/1‑128 (MQ=255)

             tagTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAAttt                                                                                                                    <  1:9508463/128‑1 (MQ=255)

             tagTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAAttt                                                                                                                    >  1:2330353/1‑128 (MQ=255)

                tttATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATAATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATAATTTGATTAAATTTatt                                                                                                                 >  1:5652916/1‑126 (MQ=255)

                 ttATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAATACGCTCAAAATCATTCATTATTTGATTAAATTTAGTa                                                                                                                >  2:2349075/1‑128 (MQ=255)

                   ataGTTATTCACTAGTTTAAAATCAGTTTGATTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTATGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATc                                                                                                              <  2:6470348/128‑1 (MQ=255)

                    taGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCt                                                                                                             <  1:3115215/128‑1 (MQ=255)

                      tttatttTATATTTTTAAATAATTTTTTTTACAATTAAATAAAGAATTAATAATTATTTTAATTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCttt                                                                                                           <  1:7096511/127‑1 (MQ=255)

                       ttattaTCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTa                                                                                                          >  2:8715597/1‑128 (MQ=255)

                         aatatCTAGATTAAAATCAGATTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTAtt                                                                                                        <  2:7470540/126‑1 (MQ=255)

                          ttaaCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAAAGATCAAAATCATTCATTCTATCATAAAATATAGTATCTTTAtat                                                                                                       >  2:3447191/1‑126 (MQ=255)

                           tatCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTAtttt                                                                                                      >  1:4803953/1‑128 (MQ=255)

                                 gTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTAATCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTaaaa                                                                                                <  1:3820435/128‑1 (MQ=255)

                                  tttAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTc                                                                                                     <  2:8049597/122‑1 (MQ=255)

                                   ttAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGAtt                                                                                                                          >  1:5509881/1‑100 (MQ=255)

                                     aaaaTTAGTTTGTTTAATAGTAATTAAAGAATTATTTATTATTTTATTTTTTTAAGTTAAATATATATAAAACGCTCAAAATCATTCATTCTTTTATTAAATTTAGTATCTTTATTTTCTAAAAAGAc                                                                                            <  1:8456635/128‑1 (MQ=255)

                                     aaaaTCAGTGTGTTTACTATTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAAATATCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGAc                                                                                            <  2:8214961/128‑1 (MQ=255)

                                          cAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAt                                                                                       <  2:8491467/128‑1 (MQ=255)

                                           aGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAtt                                                                                      >  1:5206023/1‑128 (MQ=255)

                                            gttggtttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAttt                                                                                     <  2:3663366/128‑1 (MQ=255)

                                              ttgtttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTATGTATCTTTATTTTCTAAAAAGACTTTAttttt                                                                                   <  2:8842764/128‑1 (MQ=255)

                                               tgtttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAtttttt                                                                                  <  2:7835847/128‑1 (MQ=255)

                                               tgtttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAtttttt                                                                                  <  1:3219163/128‑1 (MQ=255)

                                                 tttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTAtttttttt                                                                                >  1:2941797/1‑128 (MQ=255)

                                                 tttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTATATTTTCTAAAAAGACTTTAtttatttt                                                                                >  2:6609784/1‑128 (MQ=255)

                                                  ttACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTa                                                                               <  2:8331605/128‑1 (MQ=255)

                                                  ttAATAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACTCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTa                                                                               <  1:732084/128‑1 (MQ=255)

                                                     cTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACa                                                                            >  1:6213740/1‑128 (MQ=255)

                                                     cTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACa                                                                            <  2:4444180/128‑1 (MQ=255)

                                                     cTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATACAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACa                                                                            <  2:2930995/128‑1 (MQ=255)

                                                      tAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACaa                                                                           <  2:4298176/128‑1 (MQ=255)

                                                      tAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACaa                                                                           >  2:5417216/1‑128 (MQ=255)

                                                           aTTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGa                                                                      >  2:4599030/1‑128 (MQ=255)

                                                            ttAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGAt                                                                     >  2:1180140/1‑128 (MQ=255)

                                                             tAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATCTAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGAtt                                                                    <  1:1325262/128‑1 (MQ=255)

                                                               aaGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTaa                                                                  >  2:2007249/1‑128 (MQ=255)

                                                                 gAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAatt                                                                <  2:1338967/128‑1 (MQ=255)

                                                                   attattCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAatttt                                                              >  2:1505033/1‑128 (MQ=255)

                                                                    ttattCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAatttta                                                             <  2:309852/128‑1 (MQ=255)

                                                                     tattCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAattttat                                                            >  1:6396489/1‑128 (MQ=255)

                                                                     tattCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAattttat                                                            >  1:1821832/1‑128 (MQ=255)

                                                                      attCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGAt                                                                     <  1:1489960/118‑1 (MQ=255)

                                                                       ttCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAattttattt                                                          >  1:2156774/1‑128 (MQ=255)

                                                                        tCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAattttatttt                                                         <  2:7640951/128‑1 (MQ=255)

                                                                         cATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTAttttt                                                        >  1:5845710/1‑128 (MQ=255)

                                                                          attattTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTAtttttt                                                       >  1:5372754/1‑128 (MQ=255)

                                                                          attattTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTAtttttt                                                       <  1:8284219/128‑1 (MQ=255)

                                                                          attattTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTAtttttt                                                       >  1:4133760/1‑128 (MQ=255)

                                                                           ttattttattTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTa                                                      <  2:3259734/128‑1 (MQ=255)

                                                                            tattttatttTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAg                                                     >  1:4472508/1‑128 (MQ=255)

                                                                              ttttatttaTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAgtt                                                   <  1:8098482/128‑1 (MQ=255)

                                                                                ttattttTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAgtttg                                                 >  1:3592383/1‑128 (MQ=255)

                                                                                  attttTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAgtttgtt                                               <  2:5751588/128‑1 (MQ=255)

                                                                                    ttttttAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGtttt                                             <  1:4635735/128‑1 (MQ=255)

                                                                                      ttttAAGTTCACTATATATAAAACGCTCAAAATCATT‑ATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAattttatttt                                                         >  2:6294432/1‑113 (MQ=255)

                                                                                        ttAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTATTAACAAAACAATTAATTTTATATTTTAGTTTGTTTTCAGt                                         >  2:6778707/1‑128 (MQ=255)

                                                                                        ttAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGt                                         >  2:5553836/1‑128 (MQ=255)

                                                                                        ttAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGt                                         >  1:7698006/1‑128 (MQ=255)

                                                                                        ttAAGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGt                                         >  1:272033/1‑128 (MQ=255)

                                                                                           aGTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGat                                      <  2:2542635/128‑1 (MQ=255)

                                                                                            gTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGata                                     >  1:1979958/1‑128 (MQ=255)

                                                                                            gTTCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGata                                     <  1:6741825/128‑1 (MQ=255)

                                                                                             ttCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGa                                                                      >  1:8633344/1‑94 (MQ=255)

                                                                                             ttCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGatat                                    >  1:9337037/1‑128 (MQ=255)

                                                                                              tCACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAACACGATTAATTTTATTTTTAATTTTGTTTTCAGTGATAtt                                   >  2:4798000/1‑128 (MQ=255)

                                                                                               cACTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATAttt                                  >  1:7888622/1‑128 (MQ=255)

                                                                                                 cTATATATAAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTCTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTaa                                >  2:3845153/1‑128 (MQ=255)

                                                                                                   atatataAAACGATCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAg                              <  2:595362/128‑1 (MQ=255)

                                                                                                    tatataAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGAtt                                                                    >  1:5001892/1‑89 (MQ=255)

                                                                                                    tatataAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGc                             <  2:690437/128‑1 (MQ=255)

                                                                                                    tatataAAACGATCAAAATCATTCATTCTTTGATTAAATTTATTATATTTATTTTCTAAAAATACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTTATATTTAAAGc                             <  2:9534536/128‑1 (MQ=255)

                                                                                                     atataAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCt                            >  2:3997927/1‑128 (MQ=255)

                                                                                                      tataAAACGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCtt                           >  1:3421152/1‑128 (MQ=255)

                                                                                                       ataAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCttt                          <  1:1180140/128‑1 (MQ=255)

                                                                                                       ataAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCtta                          >  1:996136/1‑127 (MQ=255)

                                                                                                         aaaaCGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAATACATTATATTTTTTAACAAAACGATTAATTATATTTAATAGTTAGTTTTCAGTGATATTTAAAGCttttt                        >  2:7109269/1‑128 (MQ=255)

                                                                                                         aaaaCGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCttttt                        <  1:8805179/128‑1 (MQ=255)

                                                                                                           aaCGCTCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTta                      >  1:3982432/1‑128 (MQ=255)

                                                                                                             cGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTtata                    >  1:1005726/1‑128 (MQ=255)

                                                                                                                tCAAAATCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATaa                 <  2:2736560/128‑1 (MQ=255)

                                                                                                                 cAAAATGATTCATTCTTTGATTAAATTTATTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTAATATaaa                <  1:7500043/128‑1 (MQ=255)

                                                                                                                  aaaaTCATTCATTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACTATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATaaaa               >  1:4302420/1‑128 (MQ=255)

                                                                                                                   aaaTCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTtatat                   <  1:9002717/123‑1 (MQ=255)

                                                                                                                    taTCATTCATTATTTGATTAAATTTACTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACa             <  2:1829876/127‑1 (MQ=255)

                                                                                                                    aaTCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACa             >  2:7290452/1‑128 (MQ=255)

                                                                                                                    aaTCATTCATGCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACa             <  2:9199163/128‑1 (MQ=255)

                                                                                                                      tcattcatTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTTAAGCTTTTTTATATAAAACAgg           <  1:6029059/128‑1 (MQ=255)

                                                                                                                      tcattcatTATTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAgg           <  2:6114430/128‑1 (MQ=255)

                                                                                                                      taattcattaTTTGATTAAATTTAGTATCTATATATTCTAAAAAGACGTTATTTTTTTTAACAAAACGAATAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTACCGCTTTTTTATATAAAACAgg           <  2:5289595/126‑1 (MQ=255)

                                                                                                                       cattcattCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTATTCACTGATATTTAAATCTTTTTTATATAAAACAgtg          >  1:2527338/1‑126 (MQ=255)

                                                                                                                        attcattaTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGgt         <  2:9353325/128‑1 (MQ=255)

                                                                                                                          tcattcTTTTATTAAAATTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGgttg       <  2:2200003/128‑1 (MQ=255)

                                                                                                                           tattattTGATTAAATTTAGTTAATTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGTTTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGgttgt      <  2:4964906/127‑1 (MQ=255)

                                                                                                                            attattTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGgttgtt     >  2:5124181/1‑128 (MQ=255)

                                                                                                                              tcTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGGTTGTtat   <  1:9160490/128‑1 (MQ=255)

TTCACAAACTAGCTAGTTTATAGTTATTATCTAGTTTAAAATCAGTTTGTTTACTAGTAATTAAAGAATTATTCATTATTTTATTTTTTTAAGTTCACTATATATAAAACGCTCAAAATCATTCATTCTTTGATTAAATTTAGTATCTTTATTTTCTAAAAAGACTTTATTTTTTTTAACAAAACGATTAATTTTATTTTTTAGTTTGTTTTCAGTGATATTTAAAGCTTTTTTATATAAAACAGGGTTGTTATA  >  CP016816/436665‑436919

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`