New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 = 311170402 (0.090)334 (0.080) 123/252 16.8 46.8% intergenic (‑93/‑221) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 311174 = 357 (0.080)intergenic (‑97/‑217) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3563 total aligned reads displayed.

CCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTAT  >  CP016816/311043‑311297
                                                                                                                               |                                                                                                                                 
taatccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatataaatataaatata                                                                                                                                   <  1:4069291‑M1/18‑1 (MQ=255)
  atccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                                                 <  2:4155222‑M1/20‑1 (MQ=255)
  ataaaaaagaaattaaaattgtaataaactttttcattttacacacaacttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatata                                                                                                                                 >  1:8688114‑M1/109‑128 (MQ=255)
  aaattaaattAAAATTTTAATTAAATATTTAATTTTAAACACACCTTATTAAAAAATAAAAAAATTTTTACATAATATTAAAAACATATATAAAATAAATTCAAaatatatatatatatatatatata                                                                                                                                 <  1:139697/128‑1 (MQ=255)
   tccaaatgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcattatatatatatatatatatat                                                                                                                                <  1:7902823‑M1/21‑1 (MQ=255)
   taaaaattaaattaaaattttaattaaatttttaattttaaacaccccttattaaaaaataaaatacttgttacatacgattctaaacatatataacatacattctttatatatatatatatatatat                                                                                                                                >  2:2864810‑M1/108‑128 (MQ=255)
        aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATtatatatatatatatatatatataatgcaa                                                                                                                           <  1:7732975/128‑7 (MQ=255)
         tgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATatata‑‑aatca                                                                                                                        <  1:7541753‑M1/27‑5 (MQ=255)
         tgaacttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcaaTATATATATATATATATATAta‑‑attca                                                                                                                        <  1:3883109‑M1/27‑4 (MQ=255)
            acttaaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAata                                                                                                                     <  1:2716593‑M1/30‑1 (MQ=255)
            aaaaTTGTAAAAATCATTTATATTATACACACACTTTATTAAAAAATAAAATATTTTTTAAATAATATAAAAAAAAAATATAAAATATATACAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATg                                                                                                                   <  1:4690596/128‑1 (MQ=255)
             aaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGAAATATGt                                                                                                                  >  2:3994631/1‑128 (MQ=255)
              ttataattttaattaaatttttcattttatacaacacttattaaaaaataaaatacttgttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATg                                                                                                                   >  2:2060252‑M1/97‑128 (MQ=255)
                aaaattgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATgcaatattta                                                                                                                 <  2:1719748‑M1/34‑4 (MQ=255)
                 tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATTCAATATTTAAAt                                                                                                              >  1:8338186/1‑128 (MQ=255)
                   attttaattaaatttttaatttttaacaacacttattaaaaaataaaataattgttaaataagattcaaaacatatataacataaattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAAt                                                                                                              >  2:1523758‑M1/92‑128 (MQ=255)
                     tgtaattaactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattaatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGaaa                                                                                                          >  1:7147947‑M1/90‑128 (MQ=255)
                      ttAACTTTTTCATTTTACACACAACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGaaaa                                                                                                         <  1:308840/128‑1 (MQ=255)
                        aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAata                                                                                                       >  2:9239180/1‑128 (MQ=255)
                           tttttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATgg                                                                                                    >  1:448631/1‑128 (MQ=255)
                            aactttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATAAA‑‑AAGCAATATGTAAATTAAAATATg                                                                                                     <  2:4357454‑M1/46‑1 (MQ=255)
                             actttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGTAAATGAaaatatag                                                                                                    <  2:7880638‑M1/47‑3 (MQ=255)
                             actttttcattttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATAtga                                                                                                    <  2:8739490‑M1/47‑2 (MQ=255)
                             actttttcattttacacaacccttattaaaaaataaaatacttgttacatactattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTAAATATTTAAATGAaaatattt                                                                                                    <  2:6950481‑M1/47‑3 (MQ=255)
                                ttttaattttacacacacattattaaaaaataaaatactttttacataagattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGtat                                                                                                 >  2:629882‑M1/79‑128 (MQ=255)
                                        ttacacaccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAatat                                                                                                      <  1:221717‑M1/45‑1 (MQ=255)
                                           aacaacccatattaaaaaataaaatacttgttacataagattcaaaacatatataacatacattaatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCg                                                                                      >  2:5090768‑M1/68‑128 (MQ=255)
                                             caccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTta                                                                                  <  2:6471828‑M1/63‑1 (MQ=255)
                                              accccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGttt                                                                                   <  1:3671154‑M1/64‑1 (MQ=255)
                                               ccccttattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTAAATATTTAAATGAAAATATTATATAATATCAACCGTTta                                                                                  <  1:9350527‑M1/65‑1 (MQ=255)
                                                tattaAAAAATAAATTATTTGTTACATAATATTCAAAAAATATATAAAATAAATTC‑TT‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaa                                                                               <  2:1048631/128‑1 (MQ=255)
                                                    tattaaaaaataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGTAAATTAAAATATGGTATAATAGAAACCGTTTATAAAg                                                                             <  2:3455960‑M1/70‑1 (MQ=255)
                                                    tattaaaaaataaaaaaatttttaaataccatacaaaaaatatataaaataaattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                                             >  2:9380584‑M1/59‑128 (MQ=255)
                                                     attaaaaaataaaattcttgttaaatatgattaaaaacatatataaaatacattcatTTTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGt                                                                            >  2:663439‑M1/58‑128 (MQ=255)
                                                      aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATA‑‑‑A‑A‑‑ATTAAATATTTAAATGAATATATATTATAATATAAAACTTATAAAAATTaaaaa                                                                       >  2:7394504/1‑128 (MQ=255)
                                                        aaaaaataaaataattgttaaataagattcaaaacatatataacatacattaatTATATATATATATATATATA‑‑‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       >  2:8354821‑M1/55‑128 (MQ=255)
                                                          aaaataaaatattttttaaatattattataaaaatatataaaatataatcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       >  1:5023872‑M1/53‑128 (MQ=255)
                                                          aaaataaaatacttgttacataagattcaaaacatatataaaatatattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       >  1:4292009‑M1/53‑128 (MQ=255)
                                                          aaaataaaatacaagttacatacgattaaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       >  1:1857531‑M1/53‑128 (MQ=255)
                                                          aaaataaaataatttttacataagattaaaaaaatatataacatacattaatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       >  1:9541125‑M1/53‑128 (MQ=255)
                                                            aataaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAAAAACAACCGTTTATAAAGTaaaaaaa                                                                     <  2:4960687‑M1/78‑1 (MQ=255)
                                                              taaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGTAAATGAATATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATa                                                                   <  2:1852297‑M1/80‑1 (MQ=255)
                                                               aaaatacttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAg                                                                  <  1:6792116‑M1/81‑1 (MQ=255)
                                                                    acttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTATATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                                             <  2:3280048‑M1/86‑1 (MQ=255)
                                                                    acttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATTGTATATTAGAAACCTTTTATATATtaaaaatatattatat                                                             <  2:3881439‑M1/86‑7 (MQ=255)
                                                                      ttgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAATTAAAAAAATAGTAaataa                                                           <  2:3681694‑M1/88‑2 (MQ=255)
                                                                       tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATTAAAATATTGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGAAAAtata                                                          <  2:5840293‑M1/89‑1 (MQ=255)
                                                                       tgttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGAAACAGTTTATATAGTAAAAAAATAGAAAAtata                                                          <  1:1000512‑M1/89‑1 (MQ=255)
                                                                        cATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATA‑‑ATGCAATATTTAAATAAAAATTTGATAAAAAACAAACCGTATAAAAATAAAAAAAATATAAAATAAaatact                                                     >  2:3011517/1‑128 (MQ=255)
                                                                         ttacatacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATTAAAATATTGTATAATAGAAAACTTTTATAAAGTAAAAAAATAGTAAATAtact                                                        <  2:4527164‑M1/91‑1 (MQ=255)
                                                                          tacatacgattcaaaacatatataacatacattcatTATATATATATATATATATA‑‑‑‑ATGCAATATATAAATGAAAATATTTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                     <  2:4742764‑M1/92‑1 (MQ=255)
                                                                          taaataagattaaaaaaatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATAtacta                                                       >  2:7706491‑M1/37‑128 (MQ=255)
                                                                            catacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                     <  1:1172538‑M1/94‑1 (MQ=255)
                                                                            catacgattcaaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                                                     <  2:2691255‑M1/94‑1 (MQ=255)
                                                                                  aaaaCATATATAACATACATTCAT‑‑TATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAATATATGGTATAATAGCAACATTTTATAAAGAAAAAAAATAGTAAATATAATACTTATTTACt                                             >  2:1158934/1‑128 (MQ=255)
                                                                                    tcaaaacatatataacatacattcatTATATATATATATATATATATATAATTCAATATTTAAATGAAAATATGTTATAATATCAACCGTTTATAAAGTAAAaaaatattaaatataaaaattattaa                                               <  1:480297‑M1/102‑12 (MQ=255)
                                                                                     caaaacatatataacatacattcatTATATATATATATATATATATA‑‑ATTCAATATGTAAATAAAAATATTTTATAATAGAAACATTATATAAAGTAAAAAAATATTAAATAAACTacttattatcta                                            <  1:5567556‑M1/103‑6 (MQ=255)
                                                                                        aacatatataacatacattaatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                                         >  1:7329245‑M1/23‑128 (MQ=255)
                                                                                           atatataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaa                                                                       <  1:5234694‑M1/76‑1 (MQ=255)
                                                                                              tataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAATGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                                   <  1:590984‑M1/112‑1 (MQ=255)
                                                                                               ataacatacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGCTATAATAGCAACATTTTATAAAGTAAAAAAATATTAAATATAAAACATAATTACAAATAAAATCTa                                  <  1:6256051‑M1/113‑1 (MQ=255)
                                                                                                atacatTCAT‑‑TATATATATATATATATATATATA‑‑ATTATATATTTAAATGAAAATATTGTATAATAGAAACAGGTTATAAAATAAAAAAATAGTAAATATACTAATAATTTACTAATAAAATATAttt                               >  1:2074928/1‑128 (MQ=255)
                                                                                                 tacatTCAATATATATATATATATATATATATATA‑‑ATTAAAAATTAAAATGAAAATATGGTATAATAAAAACATTTTATAAAGAAAAAAAATAGTATAAATACTACTTATATACAAATAAAAACTAta                                >  1:9206673/1‑127 (MQ=255)
                                                                                                 aacatacattcatTATATATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtt                                <  2:8184832‑M1/115‑1 (MQ=255)
                                                                                                  acaaTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAttt                               <  1:3489005/128‑1 (MQ=255)
                                                                                                    atacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATATCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATATACTAATAAAATctattatt                             <  1:8840658‑M1/118‑4 (MQ=255)
                                                                                                    atacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAA‑TAGTAAATATTCTACTTATATAATAATAAAATCTATTttta                            <  2:2222305‑M1/118‑1 (MQ=255)
                                                                                                     tacattcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACCTTTTATAAATTAAAAAAATAGTAAATATAATAATTATTTAATAATAAAATCTATTttta                            <  2:1349171‑M1/119‑1 (MQ=255)
                                                                                                     cattcattatatatatatatatatatatata‑‑ATGCAATATGTAAATGAAAATATGTTATAATAGCAACAGTTTATAATGTAAAAAAATAGTATATATAATAATTATTTAATAATAAAATCTATTttta                            >  2:5474031/8‑128 (MQ=38)
                                                                                                      acattcattatatatatatttatatatatt‑‑ATGCAAGATGAAAATGAAAATATGGTTTAATAGCAAGCGTTTAGAATGTAAAAAGATTGTAAAGATAGTACTTATTTACTTATAAAATCTAttttttt                           >  2:7111607/9‑126 (MQ=255)
                                                                                                       ttcattatatatatatatatatatatata‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttatt                          <  2:9068032/123‑1 (MQ=255)
                                                                                                        attATATATATATATATATATATATATA‑‑ATGCAATATGTAAATTAAAATATGGTATAATAGAAACAGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAATCTATAttaattt                         >  1:85011/1‑128 (MQ=39)
                                                                                                         tacattcatTATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt                                   <  1:6075237‑M1/108‑1 (MQ=255)
                                                                                                         aattaatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTtttattta                        >  2:5678975‑M1/8‑128 (MQ=255)
                                                                                                          tcatTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaa                       >  1:3254263‑M1/5‑128 (MQ=255)
                                                                                                           catTATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa                      >  2:8887894‑M1/4‑128 (MQ=255)
                                                                                                           atatatatatatatatatatatata‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaa                      <  1:1544253/128‑1 (MQ=255)
                                                                                                            tcatTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaa                     >  1:2349576‑M1/5‑128 (MQ=255)
                                                                                                             catTATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaa                    <  1:5408622‑M1/125‑1 (MQ=255)
                                                                                                              TATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTaaaaaa                   >  2:5317094‑M1/1‑128 (MQ=255)
                                                                                                               ATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAg                  <  2:9503467‑M1/128‑1 (MQ=255)
                                                                                                                TATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGt                 >  1:2517938‑M1/1‑128 (MQ=255)
                                                                                                                  TATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTATATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTaa               <  1:1704946‑M1/128‑1 (MQ=255)
                                                                                                                  TATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTaa               >  1:9031237‑M1/1‑128 (MQ=255)
                                                                                                                   ATATATATATATATATA‑‑ATTCAATATGTAAAAGAAAATATGATATAATATCAACCGTTTATAAATTAAAAAAATAGTAAATATACTAATTTTTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAt              <  2:6163476‑M1/128‑1 (MQ=255)
                                                                                                                   ATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATTTACTAATAAAATCTATATTTATTTAAAAAATTAAt              <  1:6463077‑M1/128‑1 (MQ=255)
                                                                                                                   ATATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTATAAAAATAGTAAATATACTAATTATTTACTAATAAAATCTATTTTTATTAAAAAaagttat              <  2:7284304‑M1/128‑4 (MQ=255)
                                                                                                                    TATATATATATATATT‑‑ATGCAATATGTAATTGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAA‑TAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt            >  2:6768692‑M1/1‑128 (MQ=255)
                                                                                                                    TATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGAAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAtt             >  1:6995057‑M1/1‑128 (MQ=255)
                                                                                                                     ATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCTTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt            >  2:7542831‑M1/1‑128 (MQ=255)
                                                                                                                     ATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt            >  2:2363977‑M1/1‑128 (MQ=255)
                                                                                                                     ATATATATATATATA‑‑ATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTAATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAAttt            >  1:5754007‑M1/1‑128 (MQ=255)
                                                                                                                      TATATATATATATA‑‑ATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAatttt           >  1:2925906‑M1/1‑127 (MQ=255)
                                                                                                                      TATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACATATTTAATAATAAAATCTATTTTTATTTAAAAAATTAatttt           <  2:3149433‑M1/128‑2 (MQ=255)
                                                                                                                       ATATATATATATA‑‑ATGCAATATGTAAATGAATATATGGTATAATAGCACCAGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTAAAAATAAAATCTatttttatttaaaaattaaatatga          <  2:6005068‑M1/128‑11 (MQ=255)
                                                                                                                       ATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGa          >  2:8055108‑M1/1‑128 (MQ=255)
                                                                                                                        tatatatatata‑‑ATGCAATATGTATATGAAAATATGGTTTAATAGCATCAGTTTATATAGTAAAAATATATTAAATATAATACTTATTTACTTATAAAATATATTTTTATTTATAAAATTATTTTTaa         >  1:6607285/1‑128 (MQ=255)
                                                                                                                          TATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAATTAAAAAAATATTAAATATACTACTTATTTACTAAAAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaa       <  2:8565730‑M1/128‑1 (MQ=255)
                                                                                                                          TATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGaaaa       >  1:8157566‑M1/1‑128 (MQ=255)
                                                                                                                           ATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAATAAAAAAATATTAAATATACAAAT‑ATTTAATAATAAAATATATTTTTATTTAAAAAATTAATTTTAAAAat     <  2:2559801‑M1/128‑1 (MQ=255)
                                                                                                                               |                                                                                                                                 
CCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCATTATATATATATATATATATATATATA‑‑ATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTAAAAAAGTAATTTGAAAAATTAT  >  CP016816/311043‑311297

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.