BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP016816	165253 =	3043 (0.680)	832 (0.210)	153/220	10.2	24.8%	intergenic (+217/‑325)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
*	?	CP016816	= 165249	2395 (0.620)	832 (0.210)	153/220	10.2	24.8%	intergenic (+213/‑329)	JCVSYN2_00665/JCVSYN2_00670	tRNA N6‑adenosine(37)‑N6‑threonylcarbamoyltransferase complex dimerization subunit TsaB/tRNA‑Ser
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 3783 total aligned reads displayed.

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

      agtataaTTAATTTATCGCAATTTTTTTAATTATTAATAAACTAAAAATATTTTTTTTTTATT‑AA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTTTAATTGTAAAAAATATC‑tttttttttt                                                                                                                            <  2:5190060/122‑1 (MQ=255)

       tttttATTTATTTATCGCATTTTTTTTAATTTTTAATAAAATAAAAATTTTATTTTTTTTTA‑TA‑TTTTTTGTT‑TA‑TTCAAA‑TTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑ttttttttttt                                                                                                                           <  2:8168163/127‑1 (MQ=255)

       gTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttt                                                                                                                           >  2:1165639/1‑128 (MQ=255)

        tttCATTAATTTATCGCACTTTTATGAATTATTAATAAAATAAAAATATTATATTTTTATA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttt                                                                                                                          <  2:2197232/128‑1 (MQ=255)

        tttCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGA‑ttttttttttat                                                                                                                          >  1:8725111/1‑126 (MQ=255)

        tttCATTAATTTATACCACTTGTATGAATTAGTAAGAAAAAAAAACTATTATCTTTTTATA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAAAAGC‑cttttttttttt                                                                                                                          <  1:9102572/128‑1 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tttttttttttttt                                                                                                                        >  2:3516398/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATATC‑tttttttttttttt                                                                                                                        >  2:5813614/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttt                                                                                                                        >  1:8087817/1‑128 (MQ=255)

          tCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttattttt                                                                                                                        >  2:3049389/1‑128 (MQ=255)

             ttAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑tttttttttttttttat                                                                                                                     >  1:1636635/1‑126 (MQ=255)

                aTTTATAGTAATTGTTTTTATTAGTAATAAAATAAAAATATTATCTTTTTATA‑TA‑TTTTTTTTA‑TA‑TTCAAA‑TTTTTAAAAAATTAATTTGAAATTTTAAAAAAAAGC‑ttttttttttttttttttat                                                                                                                  <  1:4831010/128‑3 (MQ=255)

                  tcctttatattttattaattattaatAAAATAAAACTATTATTTTTTTATT‑TA‑TTTTTTTTT‑TT‑TTAAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAAAACC‑TTTTTTTTTTTTTTTTTTtata                                                                                                                <  1:9285227/116‑1 (MQ=255)

                       gCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAAATTGTAAAAAATAGA‑TTTTtttttttatttttttaattgtaa                                                                                                           >  2:2010446/1‑121 (MQ=255)

                          cTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTatattgtaattat                                                                                                        >  2:8035830/1‑119 (MQ=255)

                           ttGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTCTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑ttttttttttttttttttttattgtaaatta                                                                                                       >  2:2887345/1‑116 (MQ=255)

                                     tatattaaaaataaaaataTATTATTTTTATA‑TATTTTTTTTTT‑TA‑TTTAAA‑TTTTAAAAAAATAAATTTTTAAATTTAAAAAA‑ATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAgg                                                                                            <  1:3642202/121‑1 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATTTAAATATAAAtttaat                                                                                             >  1:3776769/1‑125 (MQ=255)

                                     tAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTAAgt                                                                                            >  1:4329031/1‑127 (MQ=255)

                                      atttataaaataaaaattTTATTTTTTTTTT‑TA‑TTTTTTTTT‑TA‑TTAAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGt                                                                                           <  2:1021241/122‑1 (MQ=255)

                                      aGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGTAAAAAAAAATTATAgta                                                                                           >  1:4656876/1‑126 (MQ=255)

                                      aGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTATTTTTTTTTTTTTTATAATTTAAAAATAATTTTTattta                                                                                          >  2:4257993/1‑124 (MQ=255)

                                       ataaataaataaaaataTTATTTTTTTTTA‑‑A‑TTTTTTTTT‑TATTTTAAA‑TTTTTAAAAAAATAATTTTAAATTTTTAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTa                                                                                          <  2:6744746/119‑1 (MQ=255)

                                        tatttaaataaaatttTTATTTTTTTTTT‑AA‑TTTTTTTTA‑TT‑TTTAAA‑TTTTTTAAAAATTTATTTTAAATTTTTAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  2:6169032/120‑1 (MQ=255)

                                        tattaaaaaaaaaataTTATATTTTTATT‑AT‑TTTTTTTTA‑TT‑TTAAAA‑TTTTTAAAAAATTAATTTTAACTTTTAAAAAAAATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTAt                                                                                         <  1:7812838/119‑1 (MQ=255)

                                         aaGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATTAATTTTAGTTAttt                                                                                       >  2:3356553/1‑128 (MQ=255)

                                            taactaaaacttATATATTTTTTTA‑TA‑TTTTTTGTA‑TT‑TGCAAA‑TTTTTAAAAAATTAATTTTAACTTTGAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTttgtt                                                                                   <  1:8392302/127‑1 (MQ=255)

                                            aaactaaaactaTTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TAATGAAAATATAAATTTTA‑CTATTttgt                                                                                    >  2:4825498/1‑128 (MQ=255)

                                              actaaaactaTTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATATAAAAAAAAATTTTattttttttatt                                                                                   >  2:5338318/1‑117 (MQ=255)

                                                  aaactaTTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGATATTTTTTTGTATa‑at                                                                           >  2:4629858/1‑127 (MQ=255)

                                                   aactaATTTATTTTTTGA‑AT‑TTTTTTTTA‑AA‑TTCAAA‑TTTTTAAAATATTAATTTTAAATTGTAAAAAA‑ATT‑GTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTa                                                                              <  2:2555312/128‑1 (MQ=255)

                                                     cttttatGTTTTTTGA‑TA‑TTTTTTGTT‑TA‑TTGAAA‑TTTTTTAAAAATTAATTTTAACTTGTATAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑Ag                                                                           <  2:1661714/125‑1 (MQ=255)

                                                     atatttttattttAGATTA‑TTTTTTTTT‑TT‑TG‑AAA‑TTTTTAAAAAATTAATTTGTAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑Ag                                                                           <  1:6334122/119‑1 (MQ=255)

                                                     atattatTTTTTTATT‑TT‑TTTTTTTTA‑TT‑TTTAAA‑TTTTTTAAAAATTAATTTTTATTTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑Ag                                                                           <  2:2716843/127‑1 (MQ=255)

                                                      tattatTTTTTTTTT‑TA‑TTTTTTTTT‑TA‑TTTAAA‑TTTTTAAAAAATTTATTTTTTATT‑TTAAAAATTTT‑TTTTTTTTTTTTTTTTTTTATAATTTAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGt                                                                          <  1:7029700/128‑1 (MQ=255)

                                                      tattatCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGTAAATTTAAATTATAATTATTTTTTTTTATA‑ATTa                                                                         >  2:7231631/1‑128 (MQ=255)

                                                       attatCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAAAAAAAATTTTTGTTATTTTTTTTTATA‑ATTa                                                                         >  2:4408770/1‑128 (MQ=255)

                                                        ttttttttttATT‑TT‑TTTTTTGTT‑TA‑TTTAAA‑TTTTTAAAAATTTATTTTTAATTTTTAAAAAATA‑‑‑TATTTTTTTTTTTTTTTTTTTAATGGATATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATc                                                                       <  2:7564010/123‑1 (MQ=255)

                                                        ttttgttttttTA‑TA‑TTTTTTTTT‑TA‑TTGAAA‑TTTTTAAAAAATTTATTTGAAATTTTTAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATc                                                                       <  1:2980399/123‑1 (MQ=255)

                                                        ttatCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGTAAATAAAAATTTAAGTTATTTTTTTGTATA‑ATTATCt                                                                      >  1:5347076/1‑128 (MQ=255)

                                                            ttttttAGA‑TT‑ATTTTTTTA‑TA‑TTAAAA‑TTTTTAAAAAAATAATTTGAAAATTTAAAAAAT‑‑‑‑TGTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTaaaa                                                                  <  2:7741643/127‑1 (MQ=255)

                                                              ttttAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTTTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATATTGAAATTATAAATTTTATTAAATTTTTTGTATA‑ATTAAATaaaaa                                                                 >  1:223954/1‑128 (MQ=255)

                                                               tttAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTAATTTTTTTTTTTTATA‑ATTATaaaaaaaa                                                                >  2:9000159/1‑128 (MQ=255)

                                                                  ttataa‑tTTTTTTTT‑TA‑ATCAAATTTTTTAAAAAATTTATTTTAAATTTTAAAAAAAAG‑‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATa                                                             <  2:2349907/123‑1 (MQ=255)

                                                                    a‑ta‑tTTTTTTTT‑TA‑TTCAAA‑ATTTTTAAAAATTAATTATAAATTGTAAAATATAG‑‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGa                                                           <  1:4145064/128‑1 (MQ=255)

                                                                    a‑ta‑tTTTTTTTA‑TA‑TGAAAA‑TTTTTAAAAAAATTTTTTTATCATGTTAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGa                                                           <  2:638169/128‑1 (MQ=255)

                                                                    a‑ta‑tTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTAAAATGAAAAAATAAATTTTATTAATATTTTTG‑‑TA‑AATATATAAAAAAATaaaa                                                          >  1:1915007/1‑128 (MQ=255)

                                                                      aattttattGTATTA‑TGAAAT‑TTTTAAAATATTTAATTTTAA‑TTTTAAAAAAT‑‑T‑TCTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTATA‑AGTATCTAAAAAAATAGa                                                           <  2:5997744/125‑1 (MQ=255)

                                                                      aa‑tTTTTTGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑TTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAg                                                        <  2:8856466/127‑1 (MQ=255)

                                                                         ttttttGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTAGTTATTTTTTTTTAAA‑ATTTTATAAAAAAATATaaa                                                         >  1:7954389/1‑128 (MQ=255)

                                                                           ttttGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTAATAATTTAAATATAAATTTTAATTATTTTTTTTTAAA‑AATATATAAAAAAATAaaaataa                                                      >  1:5574857/1‑125 (MQ=255)

                                                                           ttttGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTAAAATGGAAATATAAATTTTTGGTTTTTTGTTTTATT‑AGTATCTAAAAAAATATAAAGGaa                                                     >  2:5012444/1‑128 (MQ=255)

                                                                             tttta‑ta‑TTTAAA‑TTTTTTAAAAATTAATTTTTTATTTTAAAATATA‑T‑TTTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGaa                                                     <  1:6812985/125‑1 (MQ=255)

                                                                             tttta‑ta‑TTTAAA‑TTTTTAAAAAATTAATTTTAAAATGTTAAAAATA‑‑‑TATTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGaaa                                                    <  1:1290062/125‑1 (MQ=255)

                                                                              tGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTATTTATTTTTTTTTCTA‑ATTTTAAAAAAAAATATAAATGaa                                                     >  1:4518545/1‑128 (MQ=255)

                                                                              tGTA‑TA‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAAATAAAAAATAAATTTAATATATTTTTTTATATA‑ATAATAAAAAAAAATAaaaaaaaa                                                     >  2:4022058/1‑124 (MQ=255)

                                                                                ttttttttcAAA‑TTTTTAAAAAATTAATTTTAAATTTTAAAAAATA‑‑‑TCTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGaaaa                                                   <  1:1134130/120‑1 (MQ=255)

                                                                                ta‑ta‑TGCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTGAAATATAAATTTTAGGTATTTTGTTTTATA‑ATTTTATAAAAAATTATAAATTaaaaa                                                  >  1:178891/1‑128 (MQ=255)

                                                                                    tatttaaa‑TTTTTAAAAAATTAATTTTAATTTTTTAAAAATAG‑‑ATTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAat                                                <  2:9183250/123‑1 (MQ=255)

                                                                                     tattatatttttTAAAAAATTTATTTTAAATTTTAATAAAT‑TT‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAat                                                <  1:4984208/120‑1 (MQ=255)

                                                                                       gCAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATATTGTAAATATAAATTTTAGTTATTTTTTTTTATA‑ATTATATAAAAAAATATAAATAAAATAatat                                              >  1:3450265/1‑128 (MQ=255)

                                                                                        cAAA‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGAAAATATAAATTTTTGGTATTTTGTTTTCTA‑TGTTTATAAAAAAATAAAAATTAAAAAATAtttt                                           >  1:8219325/1‑126 (MQ=255)

                                                                                         aaa‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGTAAATATAAATTTTATGTATTTTGTTTTAAA‑AGTTTATAAAAAAATATAAATGAAAAAATTTTg                                            >  1:1012470/1‑128 (MQ=255)

                                                                                          aa‑TTTTTTAAAAATTTATTTTTAATTTTTAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGtt                                          <  2:7009624/128‑1 (MQ=255)

                                                                                           a‑TTTTTAAAAAATTAATTTGAACTTGTAAAAAATAGC‑‑‑‑‑‑TTTTTTTTTTTTTTATAATGGAATTATAAATTTTAGTTATTTTTTTTTCTT‑TGTATATAAAAAAATATAAAGTAAATAAAATTTTTtaatg                                     >  1:2622921/1‑126 (MQ=255)

                                                                                              tttAAAA‑AATTAATTTTAAATTTTAAAAAAATGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  1:2799060/128‑1 (MQ=255)

                                                                                              tttAAAA‑AAATAATTTTAAATTGTAAAAAATA‑‑‑‑TCTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  1:7623893/128‑1 (MQ=255)

                                                                                                ttaataaattatttTTAAATTTTAAAAAATA‑‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  2:1380627/122‑1 (MQ=255)

                                                                                                 taaaaaaTTAATTTTAAATTTTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGt                                    <  1:8932659/127‑1 (MQ=255)

                                                                                                  taaatattaattTTTATTTGTAAAAATTAG‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                   <  1:6171451/123‑1 (MQ=255)

                                                                                                  aaaaaaTTAATTTTAAATTGTAAAAAATATC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTa                                   <  2:7879748/128‑1 (MQ=255)

                                                                                                    aaatttaattT‑AAATTTTAAAAAATAAC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATa                                <  2:8312674/124‑1 (MQ=255)

                                                                                                      aattaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTAATTTAAATATAATTTTTAGGTTTTTTGTTTTGTA‑ATTATATAAAATATTATTAATGAAAAAATATTTTTTAAATTataa                                >  1:9393785/1‑125 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTTTAAT‑GAAATTTAAATTTTTTGTTTTTTTTTGTATT‑AGTTTATTAAAAAAAATAAATTAAAAAATTTTTTTTAAATTaaatat                              >  1:6674964/1‑124 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGTATTTTAATTTTTTGGGATTTTGTTGGCTA‑ATTATACAAAAAAATAAAAAGCAAAAAATTTTTTTTAAATTATTAca                              >  2:8500632/1‑127 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTAATAT‑AT‑GAAATATAAATTTTATTTATTTTTTTTTATA‑ATTATAAAAAAAAATATAATTGAAAAAAAATTTTAAAAAGAAATaaaaa                            >  2:3832802/1‑124 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTATGTATTTTTTTTTATA‑ATTATCTAAAAAAATATAAAATAAAAAATTTTTTTAAAATTATTAATa                             >  1:5155699/1‑128 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑ATTATATAAAAAAATTTAAAGAAAAAAATTTTTTTAAAATTATTAATa                             >  1:7414610/1‑128 (MQ=255)

                                                                                                       attaattTGAACTTGTAAAAAATAGC‑‑‑‑TTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAATGTTATACTaa                            >  1:3301722/1‑128 (MQ=255)

                                                                                                         taattTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTT‑TATTGTAAATAAAAATTTTTTTTTTTTTTTTTTATATTTTATTAAAAAAAATA‑AAAGAAAAAAATTTTTTTAAAAttattataaa                            >  1:650570/1‑124 (MQ=255)

                                                                                                          aattTGAACTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTATA‑AGTATCTAAAAAAATTGAAAGTAAAAAATATTTTTAAAAGTAATAATaaaa                          >  1:5901181/1‑128 (MQ=255)

                                                                                                                aaCTTGTAAAAAATAGCTTTTTTTTTTTTTTTTTTTTATAATTTAAATAAAATTTTTTGTTATTTTTTTTTATA‑ATTTTATAAAAAAATAAAAAGAAAAAATAATTTTTAAAATTAATAATAAAatta                       >  1:2428257/1‑128 (MQ=255)

                                                                                                                 tattttAAAAAATA‑T‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAATTAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTAttt                    <  2:9507186/123‑1 (MQ=255)

                                                                                                                  cTTGTAAAAAATAGC‑‑TTTTTTTTTTTTTTTTTTATAATTAAAATAAAATTTTTAGTTTTTTTGTTTTATA‑ATTATAAAAAAAAATAAAAATTAAAAAATTTTTTTAAAATAAAAAAAAAAAttttttt                   >  2:6549849/1‑127 (MQ=255)

                                                                                                                  cTTGTAAAAAATAGC‑‑‑TTTTTTTTTTTTTTTTTAAAATGTAAATATAATTTTTAGGTTTTTTTTTTTATA‑ATTATATAAAAAAAAAAAAATTAAAAAATATTTTTAAAATTAAAAATaaatatttttat                  >  1:3143858/1‑119 (MQ=255)

                                                                                                                      tAAAAAATTG‑‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGt               <  1:723139/128‑1 (MQ=255)

                                                                                                                       ataaattattttttttttttttttttttttATAATTGAAATATAAATTTTATTTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATg                <  1:5756832/117‑1 (MQ=255)

                                                                                                                         aaaaTAGC‑‑‑TTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTTTTTTGTTGTATA‑AGTATATAAAAAAATAGAAAGGAAAAAATATTGTTAAAATTAATAATAAAATTAtttaattttaat           >  2:3198803/1‑128 (MQ=255)

                                                                                                                          aaaTAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTTGGTTTTTTGTTGTCTA‑AGTATATAAAAAAATATAAAGGAAAAAATATTGTTAATAGTAATAATAAAATTATTTAATGttaat           >  1:3938943/1‑128 (MQ=255)

                                                                                                                          aaaTAGC‑‑TTTTTTTTTTTTTTTTTTATAATGGAAATAAAAATTTTTGGTTTTTTTTTGTAAT‑ATAATAAAAAAAAAAAAAAAGAAAAAAATATTTAAAAAATTAATACTAAAATTTTTAAATTttaat           >  2:1873917/1‑128 (MQ=255)

                                                                                                                           aaaaaatatcttttttttttttttttATAATGGAAATATAAATTTTATGTATTTTGTTGTCTA‑AGTATCTAAAAATATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaa            <  2:558663/118‑1 (MQ=255)

                                                                                                                              tatttttttttttttttttttttATTATGGAAATATAAATTTTAGGTATTTTGTTGTATA‑AGTATCTAAAAAAATAGATAGGAAAAAATATAGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:3683165/124‑1 (MQ=255)

                                                                                                                              atatcttttttttttttttatttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:8548966/123‑1 (MQ=255)

                                                                                                                              aatttttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  2:9353806/124‑1 (MQ=255)

                                                                                                                              aatatttttttttttttttttttATAATTTAAATATAAATTTTAGTTATTTTGTTTTATA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGttaatta         <  1:1438648/124‑1 (MQ=255)

                                                                                                                                  tttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAAc     <  1:20688/128‑1 (MQ=255)

                                                                                                                                  cttttttttttttttttttATAATGTAATTTTAAATTTTTGTTTTTTTTTGGTATA‑ATTTAATAAAAAAATATAAAGTAAAAATTATTTTTAAATGTAATAAAAAAATTATTTAATGTTAATTaaaaa     >  2:8665603/2‑127 (MQ=255)

                                                                                                                                  cttttttttttttttttttATAATGGAAATATAAATTTTAGGTTTTTTTTTGTATA‑ATTATATAAAAAAATATAAAGGAAAAAATATTTTTAAAAGAAATAATAAAATTATTTAATTTTAAATaaaaa     >  1:6033354/2‑127 (MQ=255)

                                                                                                                                   ttttttttttttttttttATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACt    <  1:9524787/128‑1 (MQ=255)

                                                                                                                                   ctttttttttttttttttATAATGGAAATAAAAATTTTAGGTATTTTTTTGTCTA‑AGTATAAAAAAAAATATAAAGGAAAAAATATTTTTAAAATTAATAAAAAAATTATTTAATTTAAATAAAAACt    >  2:7407250/2‑128 (MQ=255)

ATATTTAGTTTCATTAATTTATCGCACTTGTATGAATTAGTAAGAAACTAAAACTATTATCTTTTTAGA‑TA‑TTTTTTGTA‑TA‑TGCAAA‑TTTTAAAAGAATTAATTTGAACTTGTAAAAAATAGC‑TTTTTTTTTTTTTTTTTTTATAATGGAAATATAAATTTTAGGTATTTTGTTGTCTA‑AGTATCTAAAAAAATAGAAAGGAAAAAATATTGTTAAAAGTAATACTAAAATTATTTAATGTTAATTAAAACTTA  >  CP016816/165126‑165380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.