Predicted mutation
evidence seq id position mutation annotation gene description
RA CP016816 366,681 G→A M1V (GTG→GTA) † JCVSYN2_01595 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP016816366,6810GA99.5% 6900.2 / NA 2177M1V (GTG→GTA) †JCVSYN2_01595hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base A (1011/1153);  minor base T (8/4);  total (1019/1158)
Fisher's exact test for biased strand distribution p-value = 2.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 2233 total aligned reads displayed.

AAGAAGAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTGAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATC  >  CP016816/366556‑366805
                                                                                                                              |                                                                                                                            
aagaagAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaa                                                                                                                            >  1:874880/1‑128 (MQ=255)
aagaagAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaa                                                                                                                            <  1:3598141/128‑1 (MQ=255)
  gaagaaATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTATGTATTAAAGGAGAAAAAAGTAaaaa                                                                                                                          >  2:724850/1‑128 (MQ=255)
    agaaATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTTTTAAAGGAGAAAAAAGTAaaaatt                                                                                                                        >  1:947866/1‑126 (MQ=255)
      aaaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataa                                                                                                                      >  2:3754428/1‑128 (MQ=255)
       aaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataat                                                                                                                     <  1:3148519/128‑1 (MQ=255)
         tCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataata                                                                                                                    >  2:1583397/1‑127 (MQ=255)
          ccATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataataat                                                                                                                  >  2:2080056/1‑128 (MQ=255)
            attaattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGATAAAAGTTAAAAATAATAATTc                                                                                                                >  1:1421347/1‑128 (MQ=255)
             ttaattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCa                                                                                                               >  1:351643/1‑128 (MQ=255)
             taaattaTT‑CATTAATTTTTAATAAAAAATATTATTAATTAATTAAATTTGTAATTTGTTATAGTTA‑GTCAATTTATATATAATATCTTTTTTATTAAAGGATAAAAAATTAAAAAATAATAATTCaa                                                                                                              <  1:3023445/126‑1 (MQ=255)
              taatttATCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCaa                                                                                                              <  1:2147452/128‑1 (MQ=255)
              taattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCaa                                                                                                              <  2:14071/128‑1 (MQ=255)
              taattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCaa                                                                                                              <  2:3496434/128‑1 (MQ=255)
               aattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAATTTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGTAGAAATAAGTATAAATTAAAAATTCatg                                                                                                             >  1:1158045/1‑126 (MQ=255)
                attattCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGt                                                                                                            >  1:2217213/1‑128 (MQ=255)
                attattCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGt                                                                                                            <  2:645278/128‑1 (MQ=255)
                attattCCAGTAATTTCAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGt                                                                                                            >  1:4593752/1‑128 (MQ=255)
                    ttCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGttttt                                                                                                        <  1:2032063/128‑1 (MQ=255)
                      ccAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGttttttt                                                                                                      <  1:4026115/128‑1 (MQ=255)
                      caaGTAATTATAAATATAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATAAAATATCTTTTGTAATAAACGAGAAAAAAGTAAAAAATAATAATTCAAGtttatat                                                                                                      <  1:2535940/126‑5 (MQ=255)
                           aaTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTc                                                                                                 >  2:4014688/1‑128 (MQ=255)
                            aTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCa                                                                                                <  2:4406130/128‑1 (MQ=255)
                               ttAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCa                                                                                             >  2:3360005/1‑128 (MQ=255)
                                  aagaaaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATACAAGTTTTTTTAGTTCACCAAGa                                                                                          >  1:3304257/4‑128 (MQ=255)
                                   ataaaAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTACAAAATAATAATTCAAGTTTTTTTATTTCACCAAGaa                                                                                         >  1:2692933/1‑128 (MQ=255)
                                   ataaaAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGaa                                                                                         >  2:1126749/1‑128 (MQ=255)
                                    taaaAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAAc                                                                                        <  2:2693562/128‑1 (MQ=255)
                                     ttacaaTTTTAATTACTTATTAAGATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACt                                                                                       >  2:1259863/5‑128 (MQ=255)
                                      aaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTc                                                                                      <  1:293697/128‑1 (MQ=255)
                                        aaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCaa                                                                                    >  1:1005354/1‑128 (MQ=255)
                                        aaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCaa                                                                                    <  2:4502456/128‑1 (MQ=255)
                                          aTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAAt                                                                                  <  1:185856/128‑1 (MQ=255)
                                          aTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAAt                                                                                  <  2:458124/128‑1 (MQ=255)
                                          aTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAAt                                                                                  <  1:571839/128‑1 (MQ=255)
                                           tCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATa                                                                                 <  2:40718/128‑1 (MQ=255)
                                            cTTAATAATTACTTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaa                                                                                <  2:2442883/128‑1 (MQ=255)
                                             ttAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaaa                                                                               >  1:1589718/1‑128 (MQ=255)
                                              ttataaTTAATTATAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAATAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaaaa                                                                              <  2:570769/126‑1 (MQ=255)
                                              tataacttAATTAAAATTG‑AAATTGTTTAACTTATGTAAATTCAATTATATAATCTTTTG‑ATTAAATGCTGAAAAATTTAAAAAAAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAg                                                                             <  1:3928381/121‑1 (MQ=255)
                                              taataaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaaaa                                                                              <  2:1333733/128‑1 (MQ=255)
                                              taataaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaaaa                                                                              <  1:4508546/128‑1 (MQ=255)
                                               aataaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAg                                                                             >  1:1086369/1‑128 (MQ=255)
                                                ataaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGt                                                                            >  2:2629398/1‑128 (MQ=255)
                                                  atgTAATTATAATTGTAATTTGTTATAGTTA‑TTCAATTGTTATATAATATCTTTTTTATTATAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGttt                                                                          <  2:3086069/126‑1 (MQ=255)
                                                  aaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGttt                                                                          >  2:3437733/1‑128 (MQ=255)
                                                  aaGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGttt                                                                          >  2:1915775/1‑128 (MQ=255)
                                                   aGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGtttt                                                                         >  2:2518186/1‑128 (MQ=255)
                                                     tAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTc                                                                       >  2:1672861/1‑128 (MQ=255)
                                                      aaTTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGtttttaa                                                                      >  1:651867/1‑126 (MQ=255)
                                                           aaaTTGTAATTTGTTATATTTA‑GTCAAATTATATATAATATCTTTTGTATTAAACGACAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAg                                                                 <  2:1985747/128‑1 (MQ=255)
                                                            aaTTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAATTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGt                                                                <  1:4238041/128‑1 (MQ=255)
                                                            aaTTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTATTTAAACAAGAACTCAAATAAAAGTTTTTAAATGAGt                                                                >  2:2992743/1‑128 (MQ=255)
                                                            aaTTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGt                                                                <  1:2476359/128‑1 (MQ=255)
                                                             aTTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGtt                                                               <  1:169648/128‑1 (MQ=255)
                                                              ttGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTg                                                              <  1:1488696/128‑1 (MQ=255)
                                                                gTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGa                                                            >  2:93517/1‑128 (MQ=255)
                                                                 gtaTTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTAAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGaa                                                           >  2:1491987/3‑128 (MQ=255)
                                                                      tGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGCTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAAtt                                                      <  1:407230/128‑1 (MQ=255)
                                                                        ttATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAATGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTATTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAAtttt                                                    >  1:4334290/1‑128 (MQ=255)
                                                                           tagtta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGc                                                 <  2:796949/128‑1 (MQ=255)
                                                                            agtta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCt                                                <  1:1271004/128‑1 (MQ=255)
                                                                             gtta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTg                                               <  2:4288792/128‑1 (MQ=255)
                                                                              tta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGt                                              <  2:1017908/128‑1 (MQ=255)
                                                                               ta‑gtCAATTGATATATAATATCTTTTGTATTTAAGGTGAAAAAAGTAAAAAATAATATTTCAAGTTTTTTTAGTTCACCTAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATATTTGCTGTa                                             >  1:3235602/1‑128 (MQ=255)
                                                                               ta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGCACAATTTTTGCTGTa                                             >  1:778949/1‑128 (MQ=255)
                                                                               ta‑gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTa                                             >  2:2212573/1‑128 (MQ=255)
                                                                                a‑gtCAATTGATATATAATATCTTTTGTATT‑AAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAAt                                           <  1:441751/128‑1 (MQ=255)
                                                                                  gtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAAt                                           <  1:3862520/128‑1 (MQ=255)
                                                                                   tCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAAtt                                          >  2:3257624/1‑128 (MQ=255)
                                                                                      aTTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGa                                       <  2:2289724/128‑1 (MQ=255)
                                                                                      aTTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGa                                       <  1:4145168/128‑1 (MQ=255)
                                                                                        tGAAATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAACTAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTGATTCAATGAGTTGGAACAATTTTTGCTGTAAATGGAAt                                     <  1:2308228/128‑1 (MQ=255)
                                                                                           tatataATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAAATCAAGTTTTTTTAGTTCACCAAGAACGCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGCAATGCt                                  >  1:3761710/1‑128 (MQ=255)
                                                                                            atataATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCta                                 >  2:3917643/1‑127 (MQ=255)
                                                                                             tataATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTta                                <  1:1772530/128‑1 (MQ=255)
                                                                                               taataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAATAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  2:2873822/128‑1 (MQ=255)
                                                                                               taataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  2:276896/128‑1 (MQ=255)
                                                                                               taataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  1:2869468/128‑1 (MQ=255)
                                                                                                 atatCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATAtc                            <  2:4124892/128‑1 (MQ=255)
                                                                                                   atCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAAATCAAGTTTTTTTAGTTCACGAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATAtctc                          <  2:2357725/128‑1 (MQ=255)
                                                                                                      ttttGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCttt                       >  2:3672996/1‑128 (MQ=255)
                                                                                                      ttttGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCttt                       >  2:3826355/1‑128 (MQ=255)
                                                                                                           tATTAAAGCCGAAAAAAGTAAAAAATAATAAATCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttt                  <  1:1355744/128‑1 (MQ=255)
                                                                                                            aTTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAttttt                 <  1:71807/128‑1 (MQ=255)
                                                                                                            aTTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAttttt                 <  1:2378779/128‑1 (MQ=255)
                                                                                                             ttAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttttt                >  2:1759405/1‑128 (MQ=255)
                                                                                                               aaaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTaa              <  1:2621680/128‑1 (MQ=255)
                                                                                                               aaaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTaa              >  1:2794158/1‑128 (MQ=255)
                                                                                                               aaaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTATCAATGAGTTGGAACAAt                                                       <  2:475226/87‑1 (MQ=255)
                                                                                                                  ggAGAAAAAAGTTAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATATAAGTTTTTCAATGAGTTGGATCTATTTTTGCTGTAATTGGGTGGCTTTTTTCTCTTTTTTGTTTAAGtt           >  1:3680609/1‑127 (MQ=255)
                                                                                                                     gaAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTaaaa        >  2:3160404/1‑128 (MQ=255)
                                                                                                                     gaAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTaaaa        >  2:4207812/1‑128 (MQ=255)
                                                                                                                      aaaaaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAAt       >  1:3375105/1‑128 (MQ=255)
                                                                                                                      aaaaaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCAACAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAAt       <  1:3443421/128‑1 (MQ=255)
                                                                                                                       aaaaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAAtt      <  1:481112/128‑1 (MQ=255)
                                                                                                                         aaaGTAAAATATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTaa    <  2:874880/128‑1 (MQ=255)
                                                                                                                         aaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTaa    >  2:182947/1‑128 (MQ=255)
                                                                                                                         aaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTaa    <  2:3588454/128‑1 (MQ=255)
                                                                                                                           aGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTGGGAACAATTTTTGCTGTATTTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATc  >  1:1929990/1‑128 (MQ=255)
                                                                                                                              |                                                                                                                            
AAGAAGAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTA‑GTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTGAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATC  >  CP016816/366556‑366805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑