BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP016816	366,681	G→A	M1V (GTG→GTA) †	JCVSYN2_01595 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP016816	366,681	0	G	A	99.6%	3410.5 / NA	1141	M1V (GTG→GTA) †	JCVSYN2_01595	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (1/1); major base A (513/620); minor base T (4/1); total (518/623)
Fisher's exact test for biased strand distribution p-value = 1.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 1165 total aligned reads displayed.

AAAGAAGAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTGAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATC  >  CP016816/366555‑366805

 aagaagAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaa                                                                                                                            >  1:1292479/1‑128 (MQ=255)

 aagaagAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGAAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATGTAATATCTTTTGTATTAAAGGAGAAAAAAGTaaa                                                                                                                            >  2:1522781/1‑128 (MQ=255)

  agaagaAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaaa                                                                                                                           <  2:541936/128‑1 (MQ=255)

    aagaaATACATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaaaaa                                                                                                                         <  2:2169368/128‑1 (MQ=255)

    aagaaATACATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTaaaaaa                                                                                                                         <  1:2469585/128‑1 (MQ=255)

       aaaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataa                                                                                                                      <  1:962967/128‑1 (MQ=255)

        aaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAATTATAAAAAAGTAAAAaataat                                                                                                                     >  1:1895500/1‑128 (MQ=255)

        aaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataat                                                                                                                     <  1:839742/128‑1 (MQ=255)

        aaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataat                                                                                                                     <  2:1347843/128‑1 (MQ=255)

        aaTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataat                                                                                                                     <  1:314664/128‑1 (MQ=255)

         aTCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataata                                                                                                                    <  1:730734/128‑1 (MQ=255)

          tCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataataa                                                                                                                   <  2:2238301/128‑1 (MQ=255)

          tCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataataa                                                                                                                   >  1:2263564/1‑128 (MQ=255)

           ccATTAATTATTCCTGTAATTTTAAATATAAACTCTTAATAAGTAATTAAAATTGTAATTTGTGATAGTTAGTCAATTGATATATTATATCTTTTGTTTTAAAGGAGATAATCGTAAAAagaaataag                                                                                                                  >  2:486972/1‑127 (MQ=255)

           ccATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGTAGAAAAAAGTAAAAaataataat                                                                                                                  >  1:104005/1‑128 (MQ=255)

           ccATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataataat                                                                                                                  >  2:1865637/1‑128 (MQ=255)

           ccATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAaataataat                                                                                                                  >  2:2072013/1‑128 (MQ=255)

           ccATTAATTATTCCAGTAATATTAAATAAAAAATCTTAATAAGTAATTAAAATTATAATTTGTTATAGTTAGTCAATTGATATATAATATATTTTTTATTAAAGTATAAAAACTTAAAAaaaaataat                                                                                                                  >  2:662661/1‑128 (MQ=255)

            cATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAATGGAGAAAAAAGTAAAAAATAATAAtt                                                                                                                 >  2:168997/1‑128 (MQ=255)

             attaattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTc                                                                                                                >  2:1423841/1‑128 (MQ=255)

             attaattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTc                                                                                                                >  1:1942492/1‑128 (MQ=255)

                aattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATTATATCTTTTGGATTAAAGGAGAAAAAAGTAAAAAATAATAATACAAg                                                                                                             >  2:2201877/1‑128 (MQ=255)

                aattaTTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAg                                                                                                             <  2:364459/128‑1 (MQ=255)

                 attattCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTTGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGt                                                                                                            >  2:859991/1‑128 (MQ=255)

                     ttCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGttttt                                                                                                        >  1:883555/1‑128 (MQ=255)

                       ccAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGttttttt                                                                                                      >  2:2036132/1‑128 (MQ=255)

                        cAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTa                                                                                                     >  2:1960724/1‑128 (MQ=255)

                         aGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAg                                                                                                    <  2:2462366/128‑1 (MQ=255)

                           tAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGtt                                                                                                  <  2:211291/128‑1 (MQ=255)

                           tAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGtt                                                                                                  >  2:2417970/1‑128 (MQ=255)

                            aaTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAATGAGAAAAAAGTAAAAAATAATAATTCAATTTTTTTTAGTTc                                                                                                 >  2:434326/1‑128 (MQ=255)

                            aaTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGTAGAAAAAAGTAATAAATAATAATTAAAGTTTTTTTATTTc                                                                                                 >  1:99878/1‑128 (MQ=255)

                            aaTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGtta                                                                                                 >  1:2231930/1‑127 (MQ=255)

                            aaTTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTc                                                                                                 <  2:2325072/128‑1 (MQ=255)

                                 taaataaaACATCTTAATAAGTAATTAAATTTGTATTTTGTTATAGTTAGTCAATTGATATATATTATCTTTTGTATTAAAGGAGAAAAAATTAAAAATTAATAATTCAAGTTTTTTTAGTTCACCaa                                                                                            <  2:1754909/128‑1 (MQ=255)

                                  aaataaaAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAg                                                                                           <  2:145301/128‑1 (MQ=255)

                                      aaaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACt                                                                                       >  2:609506/1‑128 (MQ=255)

                                       aaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTc                                                                                      >  2:2000749/1‑128 (MQ=255)

                                       aaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTc                                                                                      <  2:328339/128‑1 (MQ=255)

                                       aaaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTc                                                                                      >  1:1646379/1‑128 (MQ=255)

                                        aaaaTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCa                                                                                     >  1:526008/1‑128 (MQ=255)

                                           aTCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATTATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAAt                                                                                  <  2:796160/128‑1 (MQ=255)

                                            tCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATa                                                                                 <  1:1249343/128‑1 (MQ=255)

                                            tCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTCTTTAGTTCAGCAAGAACTCAAATa                                                                                 >  1:2143843/1‑128 (MQ=255)

                                             cTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAATAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaa                                                                                >  1:568436/1‑128 (MQ=255)

                                               taataaGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATaaaa                                                                              <  1:2092800/128‑1 (MQ=255)

                                                aataaGTAATAAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAg                                                                             <  2:1228739/128‑1 (MQ=255)

                                                 ataaGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATTAAAGt                                                                            >  1:1998281/1‑128 (MQ=255)

                                                 ataaGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGt                                                                            >  1:1004212/1‑128 (MQ=255)

                                                 ataaGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGt                                                                            <  1:1367795/128‑1 (MQ=255)

                                                 ataaGTAATTAAAATTGTAATTAGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGt                                                                            <  2:1309452/128‑1 (MQ=255)

                                                      tAATTAAAATTGTAATTTGTTATAGTTAGTCAATTTATATATAATATCTATTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCAACAATAACTCAAATAAAAGttttac                                                                       >  1:1763788/1‑126 (MQ=255)

                                                      tAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTATTc                                                                       >  2:271605/1‑128 (MQ=255)

                                                           aataTTGTAATTTGTTATAGTTAGTCAATAGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGa                                                                  <  1:1593109/125‑1 (MQ=255)

                                                            aaaTTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAg                                                                 >  1:2185840/1‑128 (MQ=255)

                                                            aaaTTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAg                                                                 <  1:1129736/128‑1 (MQ=255)

                                                             aaTTGAAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGt                                                                <  2:1158491/128‑1 (MQ=255)

                                                              aTTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAATAACTCAAATAAAAGTTTTTCAATGAGtt                                                               <  1:1439703/128‑1 (MQ=255)

                                                               ttGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTg                                                              <  2:74881/128‑1 (MQ=255)

                                                               ttGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTg                                                              <  1:429744/128‑1 (MQ=255)

                                                                    aTTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACa                                                         >  1:2026648/1‑128 (MQ=255)

                                                                     tttGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACaa                                                        <  1:1854313/128‑1 (MQ=255)

                                                                     tttGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACaa                                                        <  2:1193372/128‑1 (MQ=255)

                                                                              gttagtCTATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCTAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTg                                               <  1:1554590/128‑1 (MQ=255)

                                                                              gttagtCAATTGATATATAATTTCTTTTGTATTAAAGGAGAAAAAAGTAAAGAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTg                                               <  2:1597692/128‑1 (MQ=255)

                                                                              gttagtCAATTGAAATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTg                                               <  2:1660336/128‑1 (MQ=255)

                                                                                tagtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAATAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTa                                             <  1:1680818/128‑1 (MQ=255)

                                                                                tagtCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGATGTa                                             >  1:1878641/1‑128 (MQ=255)

                                                                                   tCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAAtt                                          >  2:896803/1‑128 (MQ=255)

                                                                                       ttGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGaa                                      <  2:1796770/128‑1 (MQ=255)

                                                                                        tGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAAt                                     >  1:1179634/1‑128 (MQ=255)

                                                                                        tGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAAt                                     >  1:1476035/1‑128 (MQ=255)

                                                                                              ataataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtat                               <  2:1774556/128‑1 (MQ=255)

                                                                                               tattatCTTTTGTAGTCAAGGAGTAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  2:1263347/125‑1 (MQ=255)

                                                                                               taataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  1:1533534/128‑1 (MQ=255)

                                                                                               taataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGATtata                              >  2:2353013/1‑128 (MQ=255)

                                                                                               taataTCTTTTGAATTAAATGAGAAAAAAGTAAAAAATAATAATTCAAGTTATTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAGTGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTtata                              <  2:1058475/128‑1 (MQ=255)

                                                                                                aataTCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTatat                             >  1:179842/1‑128 (MQ=255)

                                                                                                 ctatCTTTTGTCTTACAGGAGAAAAAAGTAAAAATTAATAAATCAAGTGTTTGTAGTTCACCAAGAACTCAAATAAAAGGTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATAtc                            <  2:1096567/127‑1 (MQ=255)

                                                                                                 atatCTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATAtc                            <  2:573731/128‑1 (MQ=255)

                                                                                                     cTTTTGTATTAAGGGAGAAAAAAGTAAAAAATAATGATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCtt                        >  1:774195/1‑128 (MQ=255)

                                                                                                     cTTTTGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCtt                        <  1:1713373/128‑1 (MQ=255)

                                                                                                        ttGTATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAt                     >  2:692514/1‑128 (MQ=255)

                                                                                                           tATTAAAGGAGATAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttt                  <  1:627447/128‑1 (MQ=255)

                                                                                                           tATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttt                  <  2:2280104/128‑1 (MQ=255)

                                                                                                           tATTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttt                  <  1:2346089/128‑1 (MQ=255)

                                                                                                            aTTAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAttttt                 >  2:1492346/1‑128 (MQ=255)

                                                                                                             ttAAAGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTAtttttt                >  1:68547/1‑128 (MQ=255)

                                                                                                               aaaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTaa              >  1:356864/1‑128 (MQ=255)

                                                                                                                aaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAg             <  2:1020970/128‑1 (MQ=255)

                                                                                                                aaGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAg             <  1:122269/128‑1 (MQ=255)

                                                                                                                 aGGAGATAAAAGTAAAAAAAAATAATTCAATTTTTTTTAGTTAACAAAGAACTAAAATAAAATTTTTTCAATGAGTTTGAACAATTTTTTATGTAATTGGAATGCTTATATCTCTTGATTTTTAAAGt            >  1:2369130/1‑128 (MQ=255)

                                                                                                                 aGGAGAAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGt            <  2:156242/128‑1 (MQ=255)

                                                                                                                   gagaAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTaa          <  1:281487/128‑1 (MQ=255)

                                                                                                                     gaAAAAAGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTaaaa        <  1:927952/128‑1 (MQ=255)

                                                                                                                     gaAAAAAGTAAAAAATAATAATTCAAGTTTTTATAGTTCACCAAGAACTCAAATAAAAGTTTTGCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTaaaa        <  1:468684/128‑1 (MQ=255)

                                                                                                                        aaaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTa     <  1:2433525/128‑1 (MQ=255)

                                                                                                                         aaaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAAAGAGTTGGACCAATTTTTGCTGTAATTGGAATGCTTATTTCTGATGATTTTTTacttttttctcc    >  2:950198/1‑117 (MQ=255)

                                                                                                                          aaGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAAt   <  1:2307850/128‑1 (MQ=255)

                                                                                                                           aGTAAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATc  <  2:503417/128‑1 (MQ=255)

AAAGAAGAAATCCATTAATTATTCCAGTAATTTTAAATAAAAAATCTTAATAAGTAATTAAAATTGTAATTTGTTATAGTTAGTCAATTGATATATAATATCTTTTGTATTAAAGGAGAAAAAAGTGAAAAATAATAATTCAAGTTTTTTTAGTTCACCAAGAACTCAAATAAAAGTTTTTCAATGAGTTGGAACAATTTTTGCTGTAATTGGAATGCTTATATCTCTTTATTTTTTAAGTAAAATTAATC  >  CP016816/366555‑366805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`