New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP016816 311153 =583 (0.510)130 (0.140) 75/208 11.5 22.4% intergenic (‑76/‑238) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
?CP016816 = 311148 421 (0.450)intergenic (‑71/‑243) JCVSYN2_01300/JCVSYN2_01305 hypothetical protein/30S ribosomal protein S21
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 661 total aligned reads displayed.

TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275
                                                                                                                               |                                                                                                                                   
  tACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑ta                                                                                                                               >  1:740241/1‑128 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACCCCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tat                                                                                                                              >  2:660849/1‑128 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tat                                                                                                                              >  2:2158634/1‑128 (MQ=255)
   aCCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTAGTTACATACTATTCAAAACATATATAACATACATACAT‑‑‑‑tat                                                                                                                              >  1:1691193/1‑128 (MQ=255)
          gTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatata                                                                                                                       >  2:2199789/1‑128 (MQ=255)
            aataaCTATTCCAAATCTACTTAAAATTGTATTTAACTTTATCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatata                                                                                                                     <  2:1617773/128‑1 (MQ=255)
             atatataataaaaattaaattAAAATTTTAATTAACTTTTTAATTTTAAACACCACTTATTAAAAAATAAAATAATTTTTAAATAATATTAAAAACATATATAACATAAATTCAT‑‑‑‑tatatatatatat                                                                                                                    <  2:837881/117‑1 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                    >  2:1527179/1‑128 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                    >  2:317048/1‑128 (MQ=255)
             ataaCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                    >  1:2166044/1‑128 (MQ=255)
             ataaCTAATCAAAATGAACTTAAAATTGAAATTAAATTTTTCTTTTTACACACAACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatat                                                                                                                    <  2:2374358/128‑1 (MQ=255)
              taaCTAATAAAAATTAAATTAAAATTGTAATTAACTTTTTCATTTTAAACACCCATTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatata                                                                                                                   <  2:1778146/128‑1 (MQ=255)
              taaCAAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTTTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatata                                                                                                                   <  1:1007440/128‑1 (MQ=255)
               aaatAATACAAATTAACTTAAAATTGTAATTAACTTTTTAATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAAAATATATAACATACATTCAT‑‑‑‑tatatatatatatat                                                                                                                  <  2:282440/125‑1 (MQ=255)
                aatAATCAAAATTAAATTAAAATTGTAATTAAATTTTTAATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatata                                                                                                                 <  2:1849602/126‑1 (MQ=255)
                aatAATACAAATGAAATTAAAATTGTAATTAACTTTTTAATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑‑‑tatatatatatatata                                                                                                                 <  2:2105243/126‑1 (MQ=255)
                aCTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGAATCAATATATATATAACATACATTCTT‑‑‑‑ttgttatatatattta                                                                                                                 >  2:1288913/1‑128 (MQ=255)
                 cTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                >  1:1454299/1‑128 (MQ=255)
                 cTAATCAAATTGAAATAAAAATTGTAATTAACTTTTTCATTATACACACCCATTATTAAAAAATAAAAAACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                <  1:611279/128‑1 (MQ=255)
                 atAATCAAAATTAAATTAAAATTTTAATTAAATTTTTCATTTTACACACCCATTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatat                                                                                                                <  2:1256086/127‑1 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACTATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatata                                                                                                               >  1:359739/1‑128 (MQ=255)
                  tAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatata                                                                                                               >  2:253270/1‑128 (MQ=255)
                   aaTCAAAATGAAATAAAAATATTAATAAACTTTTTAATTATACACACACCTTATAAAAAAATAAAATAATTTTTAAATAATATTCAAAACATATATAACATACAATCAT‑‑‑‑tatatatatatatatatat                                                                                                              <  1:2451910/128‑1 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatata                                                                                                             >  2:2315732/1‑128 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatata                                                                                                             >  2:2451910/1‑128 (MQ=255)
                    aTCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCATTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACAATCAT‑‑‑‑tatatatataaatatatata                                                                                                             >  1:1192250/1‑128 (MQ=255)
                    aTCAAAATTAATTTAAATATATAATTAAATTTTTATTTTTTAAAACTCATAATTAAAAAATAAATTAATTTTTACATACGATTCAATACATATATATCATAAATTCAT‑‑‑‑tatatatatatatatatata                                                                                                             <  2:1083859/128‑1 (MQ=255)
                    aTCAAAATGAACTTAAAATTTTAATTAACTTTTTCATTTTAAACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatata                                                                                                             <  2:1729713/128‑1 (MQ=255)
                     tataaaTTAACTTAAAATTGTTATTAACTTTGTCAATTTACACACACCTTATTAAAAAATAAAATAATTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatat                                                                                                            <  2:2248245/125‑1 (MQ=255)
                     tCCAAATTAACTTAAAATTGTAATTAACTTTTTTATTTTAAACACACCTTATTAAAAAATAAAATACTTGTTACATAAGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatat                                                                                                            <  1:1751240/128‑1 (MQ=255)
                     tCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatat                                                                                                            >  1:825522/1‑128 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatata                                                                                                           >  2:2070007/1‑128 (MQ=255)
                      ccAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatata                                                                                                           >  2:507491/1‑128 (MQ=255)
                        aaaaGAACTAAAAATTGTAATTAACTTTTTATTTTTAAACAAACATTATTAAAAAATAAAATACTTGTTAAATACGATTCAAAACATATATAACATAAATTCTT‑‑‑‑tatatatatatatatatatatata                                                                                                         <  2:1971665/128‑1 (MQ=255)
                         aaTGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatataa                                                                                                        >  2:1478945/1‑127 (MQ=255)
                           tGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatatatat                                                                                                      >  1:885368/1‑127 (MQ=255)
                           agAACTTAAAATTGTAATTAACTTTTTCATTTTACACACACCTTATAAAAAAATAAAATACATGTTACATACGAATCAAAACATATAAAACATACATTCAT‑‑‑‑taaatatatatatatctatatataatt                                                                                                      >  2:423285/2‑125 (MQ=255)
                              aCTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATaaata                                                                                                   >  1:2344256/1‑125 (MQ=255)
                                  aaaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatataatgaaatatc                                                                                               >  2:2350070/1‑118 (MQ=255)
                                  aaaaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatatatatataaatcaatatc                                                                                               >  1:1818259/1‑118 (MQ=255)
                                  aaaaTTGTAATAAACTATTTCATTTTACACACCACTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATg                                                                                             <  2:1203120/128‑1 (MQ=255)
                                    aaTTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCATTATGTa                                                                                           >  2:157521/1‑128 (MQ=255)
                                      ttGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATTAAGCAataacta                                                                                           >  1:1782644/1‑124 (MQ=255)
                                       tGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑tatatatatatatatataatgcaatatgt                                                                                                    >  1:474504/1‑107 (MQ=255)
                                         ttatataattttttATTATAAACACACCTTATTAAAAAATATAATAATTTTTATAAATTATAATAAACATATATAAAATAAATTTAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAAt                                                                                        <  2:958485/120‑1 (MQ=16)
                                         tAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGa                                                                                      >  1:1257121/1‑128 (MQ=255)
                                              aaatttttCATTTTTAACACCCATTATTAAATAATATAATAATTTTTACATACTATTCTAAACATATATAAAATATATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAata                                                                                 <  2:1228787/125‑1 (MQ=255)
                                              aaCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATAAAGAAATATGTAaaataaaata                                                                                 >  1:682595/1‑128 (MQ=255)
                                               aCTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACTTACATTCAT‑‑‑‑TATATATATATATATATATATATAT‑‑TGCAATATTTATGTGAAAatat                                                                                >  2:1947926/1‑128 (MQ=255)
                                                cTTTTTAATTTTAAACACAACTTATAAAAAAATAAAATACTTGTTACATAAGATTCAAAAAAAATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATg                                                                               <  1:1881551/128‑1 (MQ=255)
                                                    ttCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAAAGCAATATGTAAATGAAAATATgtt                                                                             >  2:590667/1‑126 (MQ=255)
                                                              ataaaaattattaAAAAATATAATAATTTTTAAATAATATTAAAAAAATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGt                                                               <  1:241852/121‑1 (MQ=255)
                                                                      tattatAAAAAAAAATAATTTTTAAATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaa                                                         <  2:1153596/128‑1 (MQ=255)
                                                                      tattaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGTTATAATAGAAAACTTATATaa                                                         >  1:326421/1‑128 (MQ=255)
                                                                       attaAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATaaa                                                        <  2:364028/128‑1 (MQ=255)
                                                                       ataaaaaaaTAAAAAACTTGTTACATACTATTCAAAAAATATATAACATAAATTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTtata                                                          <  2:2394700/125‑1 (MQ=39)
                                                                           aaaaaTAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATATAAAAAAAAATATGATATAATATCAACATATTATAAATTaa                                                    >  1:1043406/1‑128 (MQ=255)
                                                                            aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATTAAAATATGTTATAATAGCAACAGTTTATAAAGTa                                                     >  1:226864/1‑128 (MQ=255)
                                                                            aaaataaaatACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAATTA‑‑‑AATATTTATATAAATATATGTTATAATAGAAACAGTTTATAAATTaaaaa                                                 >  2:716709/1‑128 (MQ=255)
                                                                             aaataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATAATTCAATATTTAAATTAAAATATTTTATAATATCAACCTTTTATAAATaaaaaaa                                               >  2:633134/1‑128 (MQ=255)
                                                                              aatataataATTTTTATATAAGATTAAAAACATATATAAAATATATTAATTATATATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAg                                                       <  2:2278039/128‑1 (MQ=25)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATAAAATTCAATATGTAAATTAAAATATTGTATAATAGCAACCTTTTATAAACTaaaaa                                                 >  2:1896905/1‑128 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTATATGATAATATTGTATATTAGCATCCGTTTATAAAGTaaaaa                                                 >  2:755993/1‑128 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATAAAATATTTAAATTAAAATATTGTATAATAACAAAAGTTTATaaatatctta                                                 >  2:572009/1‑121 (MQ=255)
                                                                              aataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaaa                                               >  2:667701/1‑128 (MQ=255)
                                                                               ataaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTaaaaaa                                                <  1:1366849/128‑1 (MQ=255)
                                                                                 aaaataCTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGTTATAATATCAAAAGTTTATAAATTaaaaaa                                                >  2:1001808/1‑128 (MQ=38)
                                                                                     taCTTTTTACATACTATTAAAAAAATATATAAAATATATTCAT‑‑‑‑‑‑‑‑‑‑TATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                      <  1:271433/128‑1 (MQ=255)
                                                                                     taCTTGTTACATACGATTCAAAACATATATAACATACATTAAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTa                                          <  1:161608/128‑1 (MQ=255)
                                                                                      aCTTGTTACATACGATTCAAAAAATATATAACATACATTCT‑‑‑‑TTATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTaa                                         <  1:2211797/128‑1 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATTCAATATGTAAATTAAAATATTTTATAATAGAAAAATTTTATAAAATAAAAAAATAatatat                                       >  1:780683/1‑128 (MQ=255)
                                                                                        ttGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAat                                       >  1:1122948/1‑128 (MQ=255)
                                                                                         tGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATTCAATATATAAATGAAAATATTTTATAATATAACAAGTTTATAAATTAAAAAAATATtatata                                      >  2:1032901/1‑128 (MQ=255)
                                                                                          gTTACATACGATTAAAAACATATATATAATAAATTAAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAat                                       <  1:1306461/128‑1 (MQ=39)
                                                                                           ttACATAAGATTAAAAACATATATAACATAAATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAAtata                                    <  2:1668055/128‑1 (MQ=255)
                                                                                             agaTACTATTCAAAACATATATAACATACATTCATTA‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAata                                      <  1:1428162/126‑1 (MQ=255)
                                                                                              aaTACTATTCTAAACATATATAAAATACATTAAT‑‑‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATactact                               <  2:482681/127‑1 (MQ=255)
                                                                                                taataTTCAAAACATATATAACATACATTCAT‑‑‑‑TTTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAataagtagta                               <  2:393817/124‑8 (MQ=255)
                                                                                                  cGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTATATAATATCAAAAGTATATATATTAAAAAAATAATAAAtataaaact                               >  1:937343/1‑123 (MQ=37)
                                                                                                  agATTCAAAACATATATATCATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTACTTa                             <  2:1434557/127‑1 (MQ=255)
                                                                                                      taaaaaCATATATAACATACAATCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTa                         <  1:1576613/126‑1 (MQ=255)
                                                                                                         aaaCATATATAACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATTAAAATATTGTATAATAGCAACCTTTTATAAATTAAAAAAATAGTATATATACAAATTATTTACta                      >  1:1089378/1‑128 (MQ=255)
                                                                                                           aCATATATAACATATATTC‑‑‑‑‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaataa                  <  2:1393903/128‑1 (MQ=255)
                                                                                                            aatatatAAAATAAATTCA‑‑‑‑ATTTATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACtaata                   <  1:536544/127‑1 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑TATATATATATATATATATATATAAAGCAATATGTAAATGAAAATAAGGTATAATATCAACCTTTTATAAATTAAAAAAATAATAAATATACTACTTATTTACTAATaaa                 >  1:1526832/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaa                 >  1:2095919/1‑128 (MQ=255)
                                                                                                              tatataACATACATTCAT‑‑‑‑‑‑‑‑TATATATATATATATATATATAATGCAATATGTAAATTAAAATATGGTATAATAGCAACAGTTTATAAAGTAAAAAAATAATAAATATACTACTTATATACAAATAAAAt               >  1:2309110/1‑128 (MQ=255)
                                                                                                               atataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATATCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATaaaa                >  1:1490735/1‑128 (MQ=255)
                                                                                                                tataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGAAATATTTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAATAAATATACTAATTATTTACTAATAAAAt               >  2:1317940/1‑128 (MQ=255)
                                                                                                                tataACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGAAATATATAAAAGAAAATATGTTATAATAGAAAACTTATATAAAGTAAAAAAATAGTAAATATAATACTTAATTACAAAAAAAAt               >  1:1059888/1‑128 (MQ=255)
                                                                                                                  taACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATTGTATAATAGCAACCGTTTATAAAGTAAAAAAATATTAAATATACTACTTATTTACTAATAAAATCt             >  1:2000952/1‑128 (MQ=255)
                                                                                                                  taACATACATTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGAAATATGTAAATGAAAATATGGTATAATAGCAAACGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCt             >  1:1924266/1‑128 (MQ=255)
                                                                                                                     catacatTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtt          <  1:2379672/128‑1 (MQ=255)
                                                                                                                      atacatTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATTTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAATAAATATAATAATTATATAATAATAATATCTAt           >  2:1798173/1‑128 (MQ=38)
                                                                                                                      atacatTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACAGTTTATAAATTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCAAttt         >  2:808976/1‑128 (MQ=255)
                                                                                                                       tacatTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGAAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtt          >  1:437945/1‑128 (MQ=255)
                                                                                                                       tacatTCAT‑‑‑‑TATATATATATATATATATATATATAAAGCAATATGTAAATGAAAATATTGTATAATAGAAAAATATTATAAAGTAAAAAAATTATAAATATACAAGTTATTTAATAATAAAATCTAtt          >  1:658558/1‑128 (MQ=255)
                                                                                                                       tacatTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTAtttt        <  2:2032594/128‑1 (MQ=255)
                                                                                                                       tacatTCAT‑‑‑‑‑‑TATATATATATATATATATATATAATAAAATATTTAAATTAAAATATTTTATAATAGAAAAATAGTATATAGTAAAAAAATATAATATATACTAATTATATAATATAAAAATATAtttt        >  2:893424/1‑128 (MQ=255)
                                                                                                                            tcat‑‑‑‑tATATATATATATATATATATATATAATGCAATATGTAAATGAATATATTGTATAATAGCAACAGTTTATAAAGTAAAAAAATAGTAAATATACTAATTATATAATAATAATATATATAtttat     >  1:1158772/1‑128 (MQ=38)
                                                                                                                               |                                                                                                                                   
TGTACCAGTTGTAATAACTAATCCAAATGAACTTAAAATTGTAATTAACTTTTTCATTTTACACACCCCTTATTAAAAAATAAAATACTTGTTACATACGATTCAAAACATATATAACATACATTCAT‑‑‑‑TATATATATATATATATATATATATAATGCAATATGTAAATGAAAATATGGTATAATAGCAACCGTTTATAAAGTAAAAAAATAGTAAATATACTACTTATTTACTAATAAAATCTATTTTTATTTA  >  CP016816/311021‑311275

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.