| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,750,086 | A→C | 7.7% | intergenic (+26/+29) | yfjD → / ← grpE | UPF0053 family inner membrane protein/heat shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,750,086 | 0 | A | C | 7.7% | 195.7 / 7.4 | 65 | intergenic (+26/+29) | yfjD/grpE | UPF0053 family inner membrane protein/heat shock protein |
| Reads supporting (aligned to +/- strand): ref base A (34/26); new base C (3/2); total (37/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.19e-01 | |||||||||||
CCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGC > NC_000913/2749786‑2750384 | ccGAAGAGGTCTCGCCGCAAAACGACGGTTCGGTGATTATCGAGGGCACCGCCTACGTGCGGGAAATCAACAAAGCCTGTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTGGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGCGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCa < 1:390478/301‑1 (MQ=255) agagGTCACGCCGCAAAACTACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCTGCATGCGAATGCCGGGc < 2:197808/301‑1 (MQ=255) gTCACGCCGCAAAACGACGGTTCGGTGATTTTCGATGTCACCGCCAACGGGCGGGAAAGCAACCAAGCCTTTAACGGGCATCTTCCGGAAGATGATGCCCGAACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCTGCATGCGAATGCCGGGCCGtt < 1:618428/301‑2 (MQ=255) gcgggcaagagggcgGTTCGGGGTGTATCGTGGTAACGGCCAACGGGCGGGAAATCAACAAAGCCTTTAACTGGCAGCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAatt < 1:2431/288‑1 (MQ=255) gccgcAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAatta < 2:592057/301‑1 (MQ=255) aaaagcgtcggttcgtggtgtttCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTACCTGGCATCTACCGGAAGATGAGGCCCGCACGGTTAATGGCGTCATGCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTAc < 1:148025/279‑1 (MQ=255) ttttATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGc < 2:204281/299‑1 (MQ=255) ttATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCtt > 2:41246/1‑301 (MQ=255) tCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAACGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCttttt > 2:257391/1‑300 (MQ=255) tGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCttt > 2:490642/1‑301 (MQ=255) cctacctgacggtcttccgatcttCAACAAAGCCGTTAACTGGAATCGACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTGTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCttt < 1:29408/278‑1 (MQ=255) cACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAACAGAAATTAAGCTTTTGCTTTCGc > 1:71866/1‑301 (MQ=255) ccGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTa < 2:71956/301‑1 (MQ=255) cccAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCgtaata < 2:327387/300‑6 (MQ=255) tCAACCAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTTAACCCGCTTCGCGAGCGTGTGGCGGAGTAACGAAAACGGCCCGGCCTTCGCATGCAGGGCCGTGAATTATTACGAACGCAGAAATTAATCTTTTTCtttagatcggaagagcacacgtctga > 2:29459/1‑278 (MQ=255) aaacaaGGCCTTTAACTTGCTTCGACCGGAATATGATGCCCGGACGTTTAATTGCGTCATTCTTGAGGCACTGGAAGAGATGCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACg < 1:44279/300‑1 (MQ=255) acaaAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCACGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGATTTTGCTTTCGCTACAGAAACCATCGCCCCACGaa > 1:156909/1‑301 (MQ=255) ggAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTTCTTTCGCTACAGTAACCATCGCCGCACGAATAGTACGACCAATCAGCATAAAAca > 2:502487/1‑300 (MQ=255) aGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGACATTCAGCTTTTGCTTTCGCTACCGTAACCATCGCCGCACGAATCGTACGACCAATCAGCGTATAAACCtt > 2:2652/1‑301 (MQ=255) ttatgCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTg < 2:438897/299‑1 (MQ=255) tcttgCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTg < 1:125677/298‑1 (MQ=255) ttgCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCa < 2:472945/300‑1 (MQ=255) tgCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAAACCTTCTgaga > 2:125801/1‑298 (MQ=255) cGCACGGTTAATGGCGTCATTCTTGAGTCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATAGCCGCACGAATCTTACTACCATTCAGCGTATAACCCTTCTGCAAAAtt > 2:391571/1‑300 (MQ=255) tGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAAc > 2:597163/1‑301 (MQ=255) ggCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTAGTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACAATCGCCGCACGAAACGTACGACCATTCAGCGTATAACCCTACTGCATAATGCNNAgaagatcagaagagcacacgaa > 2:589895/1‑280 (MQ=255) cACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAACTTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACATAAACTGGCGCAACGtcat > 1:85714/1‑301 (MQ=255) cACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGtcaa > 2:169297/1‑300 (MQ=255) aCTGGAAGAGTTCTCTGTCGCGGGCACCCGCGTGCGTATTGGTGAGTACGATATCGATATTCTCTACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCGTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGtcatc < 1:489996/301‑1 (MQ=255) tGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAg < 2:85838/301‑1 (MQ=255) gggtagtgttCCCTGGCGCAGGCACCCGTGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTGCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAg < 1:41193/292‑1 (MQ=255) ggAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTTCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGa > 2:260907/1‑301 (MQ=255) cAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTCCAGTAACCATCGCCGCCAGAATCGTACGACCATTCAGCGTCTAACCCTTCTGCATAATCCCCAGTACGTTACCTGGCGCAACATCAACAGATTccacacttccgctgg > 1:499605/1‑290 (MQ=255) ggCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGACCTGATGCACATTCGGGTcc > 2:121179/1‑301 (MQ=255) gTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGACAGTGTGGCGGAGTAACGAAAACCGCACGGCATTCGCATGCAGTGCCGTGAATTAATACGAAAGCAGAAATTAAGCTTTTGCTTTCGCCACAGTAACCATCGCCGAACGAATCGTACGACCATTCCGCATATAACCCTTCTCCATAATTCCCCGTACTTTAACTATCGCAACGTCAACAAACTCCACCATTTCCATGACCTGATCCACCTCCGGGTccccggg > 1:397004/1‑296 (MQ=255) ctcGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATCATGCCCAGTACGTTACCTGGCGCAACTTCATCAGATTCCACCATTGCGAGCGCATCATGCACCTTCGGGCCCAGGGGGACGTTAGTTtcgtcg > 1:567261/1‑301 (MQ=255) gTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCCCAACGTCATCAGATTCCACCATTGCAATGGCCTGATGCACAATCCGCTCCAGTGGGACGTTAATTTCgcacaccacc > 1:598730/1‑292 (MQ=255) gaaaaTATGTGTAAGCAGGGAAAAGTTTTTCCTGTGAAACCGCTGCGCGGGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACg < 1:596402/298‑1 (MQ=255) gACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCAACCATTGCGATGGCCTGATGCAAATTAGGGTCCAGTGGGACGTTAGTTTCGGCGAACACTTCAAca > 2:386718/1‑300 (MQ=255) aCAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGc > 2:116733/1‑301 (MQ=255) aggagaaggtaGGTAAAAGTGTTACGTGTGAAAGGGCTGGGAGAGAGTGGGGCGGAGTAACGAGAACGTCCCTGTGTTCTCATGAAGGGCCGTGAATTATTACGAAAGCAGAAATTCAGTTTTTGCTTTCGCGACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAAGCCTTCTGCATAATGCCCAGTACGGTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCCTAGGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAAc < 1:2652/291‑1 (MQ=255) gATTAAGCAGGTAAAAGTTTTTTCTGTGAAGCCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACtt < 1:260639/301‑1 (MQ=255) aTTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTa > 2:464394/1‑301 (MQ=255) ttAGGCAGGTAAAAGTTTTTCCGGTGAAACGGCTGCGCGAGAGTGTGGCGTAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTAc < 1:73557/301‑1 (MQ=255) aGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCAATCACTTCAACGCCAAACTTACGca > 2:172330/1‑301 (MQ=255) aGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCacaa < 2:157060/301‑1 (MQ=255) ggTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCCACGTCATCAGCTTCCACCATTGCGATGGCCTGATGCACCTTCCGGTCCAGAGGGACGTTAGTTACGGCGATCACTTACACCCCaaaactaccccacaa > 1:610168/1‑289 (MQ=255) aGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGACAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCCACGTCATCAGATTACACCATTGCGATGGCCTGATGCACCTTCGGGTCCAGTGGGACGTTAGTTTCGGCCATCACTTCAACGCCAAACTTACGCacaaccacccc > 1:150614/1‑295 (MQ=255) tttCCTGTGAAACCGCTGCGCGAGAGGGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCGTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATc < 1:463830/301‑1 (MQ=255) cgAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCaaa > 2:366458/1‑300 (MQ=255) gtgtGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATACACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCtt > 2:264015/1‑301 (MQ=255) ggttgGCGGAGGAACGTAAACTGACCGGCATTGGCATGCAGGGCCGGGAATTATTACGAAAGCTGAAATTAAGCTTTTGCTTTGGGTACAGTAACCAGCGCCGCAAGAATCGTAGTACCATGACGCGTAGAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGGCATCAGATTCCACCCTTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCAATTCGACGGCAAACGTACACACAACAGCCAGCATCGACTTCAGCGTCAGCTCAATGCCtt < 1:391057/298‑1 (MQ=255) aaCGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGCTCACTTCAACGCCACACTTACGCACAACCTCCAACATCCACCTCACCATACGCTCCATCCCTTccaacctcccac > 1:179908/1‑290 (MQ=255) agAAATCGGCCCGGCATTCGCATGCAGTGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACACCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGAc < 1:257123/300‑1 (MQ=255) gAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCCCAATTCCTTCAAcaaccccaaaca > 1:364147/1‑290 (MQ=255) attcaCGGCCCTGCATGCGAATGCCGGGCCGTGAATTATTACGAAAGCAGACATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGCCGATCACTTCAACGCCAAACTTACGCACAACCTCCACAAACGACTTCAGCGTCAGCCCAAAGCCATCACCCaccccacacc > 1:388095/5‑292 (MQ=255) ttcaCGGCCCTGCATGCGAATGCCGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGAACAACATCCAGCATCGCCTTCAACGACAGCTCAATGCCTTCAACCaccacccacaa > 1:150145/4‑291 (MQ=255) aaaaCGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACat < 2:364631/301‑1 (MQ=255) aCGGCCCTGCATGCGAATGCCGGGCCGTGAATTATTACGATAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCCACCTCAGCCCAATCACTTCAAACATCGCAGACaaaac > 1:636520/1‑297 (MQ=255) cGGCCCGGCATTCGCATGCAGGGCCGTGAATTCTTACGAACGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATCGCGATGTACTGATGCACATTAGGGTCCCGTGGGACGTTACTTTCGGCGATCACTTCACCGCCACACTCACGCCCAACATCCAGCATCGACTTCAGCGTCATACCAATGCCTACCACCAtacacaacataacc > 1:42957/1‑288 (MQ=255) ggCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTa > 2:366261/1‑301 (MQ=255) ttGCAGGGCCGTTAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCa < 2:13862/300‑1 (MQ=255) tGCAGGGCCGTTAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAg < 1:116609/301‑1 (MQ=255) tGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCaa > 2:67765/1‑300 (MQ=255) tGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCCACTTCAGCGTCAGCCCAATGCCTTCAACCATACCAAACCAACACGGATTAGCTTTATCac > 1:578685/1‑300 (MQ=255) gCAGGGCTGTGAATTATGTCGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAAGCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCGGGCGCAACGTCATCAGATTCCACCATTGCGATGACCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGc < 1:121055/301‑1 (MQ=255) | CCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCGAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAGAAATTAAGCTTTTGCTTTCGCTACAGTAACCATCGCCGCACGAATCGTACGACCATTCAGCGTATAACCCTTCTGCATAATGCCCAGTACGTTACCTGGCGCAACGTCATCAGATTCCACCATTGCGATGGCCTGATGCACATTCGGGTCCAGTGGGACGTTAGTTTCGGCGATCACTTCAACGCCAAACTTACGCACAACATCCAGCATCGACTTCAGCGTCAGCTCAATGCCTTCAACCATCGCAGACATATCCGGGTTAGCTTTATCAGC > NC_000913/2749786‑2750384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |