Read alignment evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | position | change | freq | score | reads | annotation | genes | product | ||
* | NC_000913 | 2,727,111 | 0 | A→C | 100.0% | 1.1 | 2 | noncoding (2074/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
Rejected: E-value exceeds prediction threshold. | ||||||||||
Reads supporting (aligned to +/- strand): new base (1/0): ref base (1/0): total (2/0) |
GCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCAAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATT > NC_000913/2726890‑2727216 | gCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCTCAACCCTGATTACGGGTCAACGTTAGAACATCACACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCCTCCACACTTCAAAGCCTCCCACCTATCCTACACATCAAGGCGCACTGCTCAGTGTCTAGCTATCATAAATGTTCACGGGGTCTTTCCGTCTTGGCGCGGGTACCCTGCCAATTCACCGCGTATGCAGTTTCCTTTAGTATCGGTTggg > 2:591560/1‑300 (MQ=1) ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATCACGGGTCCACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCAAAGCCTCACACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTCTAGTAACGGTTCACGGGGTCTTTACGTCTTCCCGCGGGTCCCCTGCAACTTCCCCGCGATTTCCATTTAACTGAGTCTCGGTGGGAGCCacgtcggccccacttaccccctt > 1:483228/1‑279 (MQ=11) | GCCAACCTTCGTGCTCCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCAAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATT > NC_000913/2726890‑2727216 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |