New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3304484NA (NA)5 (0.040) 4/576 20.3 NA intergenic (+29/+89) yhbW/mtr putative luciferase‑like monooxygenase/tryptophan transporter of high affinity
?NC_000913 = 3304553 NA (NA)intergenic (+98/+20) yhbW/mtr putative luciferase‑like monooxygenase/tryptophan transporter of high affinity
Rejected: Coverage evenness skew score above cutoff.

GCAAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3304176‑3304484
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttatccgaCATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGACG  <  NC_000913/3304553‑3304256
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
aCAAGCCTTTGTGAAGGTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCC                                                                                                                                                                                                                                                                                                                       <  2:977492/300‑1
 CAAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCT                                                                                                                                                                                                                                                                                                                      <  2:936708/301‑1
     CCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTAT                                                                                                                                                                                                                                                                                                                   >  2:928582/1‑300
      cgTTGTGAAGCTGCGCAGTGGCGAAACCGGGCAACTGCCGCCTCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCC                                                                                                                                                                                                                                                                                                                 <  1:1923/299‑1
       TTTGAGAAGCAGCGCCGTGGCGAAACCGGGCAAATGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCG                                                                                                                                                                                                                                                                                                                <  2:461892/301‑1
                                                                GATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTA                                                                                                                                                                                                                                                       >  1:243294/1‑301
                                                                      TTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGAGCTGGCAACGCTGTCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACA                                                                                                                                                                                                                                                  <  2:243549/300‑1
                                                                                         aggATGGCGGGCAGCAGGTGATGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGC                                                                                                                                                                                                                            <  1:347471/297‑1
                                                                                           TATGGCGTGCAGCAGGCGCTGAGTATGTCTTTGGTAGGTGATAAAGCGAAAGTTCTTCATGGCTTGCAGTCAATCCTGCGCGAAACCGACGCCGATGAAATTATGGTCAACGTGCAGATTTTCGACCACCAGGCGCTGCTGCATTCGTATGGGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGC                                                                                                                                                                                                                            <  2:1200301/298‑1
                                                                                                       CAGGCGCTGAGTATGTCGTTTGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAG                                                                                                                                                                                                               <  2:658451/299‑1
                                                                                                                                                                                                                                                                                                          tCCTTTTCCGCAATTTC‑‑TTCTGCCTACACAATGCCTGATGCGCTGCGCTTATCAGGTCTATGTAGGACATCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTG          <  1:743613/300‑1
                                                                                                                                                                                                                                                                                                            CTTATCCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCTCGCAGGATCGACTGCAAGCCATGCCGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCCCGCCATACTGC         >  1:1209659/1‑300
                                                                                                                                                                                                                                                                                                            CTTATCCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTG          >  2:1057987/1‑299
                                                                                                                                                                                                                                                                                                                 CCGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGCAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGCCCATAATCTCCTCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCCCTTTCGCTTTATCCCCTACCAACGACATCTCCCGCGCCTGCTGCCCGCCATACTGTGCAGA    >  1:351850/1‑300
                                                                                                                                                                                                                                                                                                                  CGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGCCATACTCCGCGCCTGCTGCACGCCATACTGCTCAGAC   >  1:99903/1‑300
                                                                                                                                                                                                                                                                                                                  CGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGACG  >  2:373417/1‑301
                                                                                                                                                                                                                                                                                                                  CGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGACG  <  2:459582/301‑1
                                                                                                                                                                                                                                                                                                                  CGACATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGACG  >  2:736453/1‑301
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
GCAAGCCTTTGTGAAGCTGCGCCGTGGCGAAACCGGGCAACTGCCGCCGCCGATTCAAAATATGGATCAGTTCTGGTCACCGTCTGAGCAGTATGGCGTGCAGCAGGCGCTGAGTATGTCGTTGGTAGGTGATAAAGCGAAAGTGCGTCATGGCTTGCAGTCGATCCTGCGCGAAACCGACGCCGATGAGATTATGGTCAACGGGCAGATTTTCGACCACCAGGCGCGGCTGCATTCGTTTGAGCTGGCGATGGATGTTAAGGAAGAGTTGTTGGGATAGTGTGTCTTAACGCGGGAAGCCTTATCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3304176‑3304484
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccttatccgaCATTTC‑‑TGCTGCCTACACAATGCCTGATGCGCTTCGCTTATCAGGTCTATGTAGGACAGCGTTGCCAGCTCGGATAAGGCTTCCCGCGTTAAGACACACTATCCCAACAACTCTTCCTTAACATCCATCGCCAGCTCAAACGAATGCAGCCGCGCCTGGTGGTCGAAAATCTGCCCGTTGACCATAATCTCATCGGCGTCGGTTTCGCGCAGGATCGACTGCAAGCCATGACGCACTTTCGCTTTATCACCTACCAACGACATACTCAGCGCCTGCTGCACGCCATACTGCTCAGACG  <  NC_000913/3304553‑3304256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.